RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 K7EN84 100 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 SPRY2O43597 315 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 CIDEAO60543 219 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 S100A8P05109 93 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 ADCYAP1P18509 176 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 S100PP25815 95 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 S100A4P26447 101 aaKnown RBP6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 ASIPP42127 132 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 FOXA3P55318 350 aaPredicted RBP6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 DEFB1P60022 68 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 ZNF415Q09FC8 603 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 BTN1A1Q13410 526 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 RRN3P1Q2M238 152 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 CLRN3Q8NCR9 226 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 NUDT10Q8NFP7 164 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 OR2D3Q8NGH3 330 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 TSKUQ8WUA8 353 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 PTH2Q96A98 100 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 NUDT11Q96G61 164 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 SPXQ9BT56 116 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 IL36BQ9NZH7 164 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 NAT8BQ9UHF3 227 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 UBR4Q5T4S7 5183 aa6.3□□□□□ -1.4
PDLIM1P3-201ENST00000582370 DMBT1Q9UGM3 2413 aaPredicted RBP6.29□□□□□ -1.4
PDLIM1P3-201ENST00000582370 TRAV12-2A0A075B6T6 113 aa6.29□□□□□ -1.4
PDLIM1P3-201ENST00000582370 SNURFLB1AK76 121 aa6.29□□□□□ -1.4
PDLIM1P3-201ENST00000582370 OR5AL1P0C617 328 aa6.29□□□□□ -1.4
PDLIM1P3-201ENST00000582370 CRIP1P50238 77 aa6.29□□□□□ -1.4
PDLIM1P3-201ENST00000582370 CACNG7P62955 275 aa6.29□□□□□ -1.4
PDLIM1P3-201ENST00000582370 LGALS9BQ3B8N2 356 aa6.29□□□□□ -1.4
PDLIM1P3-201ENST00000582370 COX19Q49B96 90 aa6.29□□□□□ -1.4
PDLIM1P3-201ENST00000582370 NHLRC2Q8NBF2 726 aa6.29□□□□□ -1.4
PDLIM1P3-201ENST00000582370 SYT8Q8NBV8 401 aa6.29□□□□□ -1.4
PDLIM1P3-201ENST00000582370 C7orf77A4D0Y5 90 aa6.28□□□□□ -1.4
PDLIM1P3-201ENST00000582370 PGPEP1LA6NFU8 196 aa6.28□□□□□ -1.4
PDLIM1P3-201ENST00000582370 GIG44P09565 113 aaPredicted RBP6.28□□□□□ -1.4
PDLIM1P3-201ENST00000582370 ZNF80P51504 273 aaPredicted RBP6.28□□□□□ -1.4
PDLIM1P3-201ENST00000582370 DAZ2Q13117 558 aaKnown RBP6.28□□□□□ -1.4
PDLIM1P3-201ENST00000582370 RASL11AQ6T310 242 aa6.28□□□□□ -1.4
PDLIM1P3-201ENST00000582370 NAGKQ9UJ70 344 aa6.28□□□□□ -1.4
PDLIM1P3-201ENST00000582370 DNAH5Q8TE73 4624 aa6.28□□□□□ -1.4
PDLIM1P3-201ENST00000582370 IGKV3D-20A0A0C4DH25 116 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 SMIM27A0A1W2PRY6 76 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 LYRM9A8MSI8 78 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 J3KRW8 73 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 CDK2AP2O75956 126 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 RNF212Q495C1 297 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 PRR9Q5T870 116 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 SMIM15Q7Z3B0 74 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 ATP5L2Q7Z4Y8 100 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 ZNF575Q86XF7 245 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 ZFP82Q8N141 532 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 C1orf158Q8N1D5 194 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 MAPKAPK5-AS1Q8N8E1 139 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 FER1L6-AS1Q8NA97 138 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 OR11H2Q8NH07 326 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 FRZBQ92765 325 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 SSBP4Q9BWG4 385 aaPredicted RBP6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 RNASE7Q9H1E1 156 aaKnown RBP6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 C11orf68Q9H3H3 251 aaKnown RBP6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 RPS10P5Q9NQ39 176 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 PHLDA3Q9Y5J5 127 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 TIMM8BQ9Y5J9 83 aaPredicted RBP6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 V9GYV3 84 aa6.27□□□□□ -1.41
PDLIM1P3-201ENST00000582370 IGHV4-4A0A075B6R2 117 aa6.26□□□□□ -1.41
PDLIM1P3-201ENST00000582370 M0R2P5 195 aa6.26□□□□□ -1.41
PDLIM1P3-201ENST00000582370 RTL8CO15255 209 aa6.26□□□□□ -1.41
PDLIM1P3-201ENST00000582370 SNAI2O43623 268 aa6.26□□□□□ -1.41
PDLIM1P3-201ENST00000582370 TYMSP04818 313 aa6.26□□□□□ -1.41
PDLIM1P3-201ENST00000582370 CTRLP40313 264 aa6.26□□□□□ -1.41
PDLIM1P3-201ENST00000582370 TCL1AP56279 114 aa6.26□□□□□ -1.41
PDLIM1P3-201ENST00000582370 FXYD7P58549 80 aa6.26□□□□□ -1.41
PDLIM1P3-201ENST00000582370 DEFB135Q30KP9 77 aa6.26□□□□□ -1.41
PDLIM1P3-201ENST00000582370 RNASE8Q8TDE3 154 aaKnown RBP6.26□□□□□ -1.41
PDLIM1P3-201ENST00000582370 C18orf15Q96N68 181 aa6.26□□□□□ -1.41
PDLIM1P3-201ENST00000582370 CNFNQ9BYD5 112 aa6.26□□□□□ -1.41
PDLIM1P3-201ENST00000582370 SMCO4Q9NRQ5 59 aa6.26□□□□□ -1.41
PDLIM1P3-201ENST00000582370 IGHV3OR16-12A0A075B7B8 117 aa6.25□□□□□ -1.41
PDLIM1P3-201ENST00000582370 IGHV3-16A0A0C4DH30 117 aa6.25□□□□□ -1.41
PDLIM1P3-201ENST00000582370 HIGD1CA8MV81 97 aa6.25□□□□□ -1.41
PDLIM1P3-201ENST00000582370 A8MWV9 139 aa6.25□□□□□ -1.41
PDLIM1P3-201ENST00000582370 ATP6V1G1O75348 118 aa6.25□□□□□ -1.41
PDLIM1P3-201ENST00000582370 TRGC1P0CF51 173 aa6.25□□□□□ -1.41
PDLIM1P3-201ENST00000582370 IGLC6P0CF74 106 aa6.25□□□□□ -1.41
PDLIM1P3-201ENST00000582370 RIGQ13278 110 aa6.25□□□□□ -1.41
PDLIM1P3-201ENST00000582370 MUC21Q5SSG8 566 aa6.25□□□□□ -1.41
PDLIM1P3-201ENST00000582370 RASL10AQ92737 203 aa6.25□□□□□ -1.41
PDLIM1P3-201ENST00000582370 SCRT2Q9NQ03 307 aa6.25□□□□□ -1.41
PDLIM1P3-201ENST00000582370 APLNQ9ULZ1 77 aa6.25□□□□□ -1.41
PDLIM1P3-201ENST00000582370 A0A1B0GUT8 65 aa6.24□□□□□ -1.41
PDLIM1P3-201ENST00000582370 RHODO00212 210 aa6.24□□□□□ -1.41
PDLIM1P3-201ENST00000582370 ARMS2P0C7Q2 107 aa6.24□□□□□ -1.41
PDLIM1P3-201ENST00000582370 SPART-AS1P0CW21 52 aa6.24□□□□□ -1.41
PDLIM1P3-201ENST00000582370 HTN1P15515 57 aa6.24□□□□□ -1.41
PDLIM1P3-201ENST00000582370 KIR3DS1Q14943 382 aa6.24□□□□□ -1.41
PDLIM1P3-201ENST00000582370 SPANXN1Q5VSR9 72 aa6.24□□□□□ -1.41
PDLIM1P3-201ENST00000582370 Q8N1X5 172 aa6.24□□□□□ -1.41
PDLIM1P3-201ENST00000582370 C11orf72Q8NBR9 251 aa6.24□□□□□ -1.41
PDLIM1P3-201ENST00000582370 C11orf45Q8TAV5 145 aa6.24□□□□□ -1.41
PDLIM1P3-201ENST00000582370 C9orf85Q96MD7 179 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms