RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 EVI2AP22794 236 aa16.91■□□□□ 0.3
CCDC47-204ENST00000582252 ADAMTSL5Q6ZMM2 481 aa16.91■□□□□ 0.3
CCDC47-204ENST00000582252 DYNLRB2Q8TF09 96 aa16.91■□□□□ 0.3
CCDC47-204ENST00000582252 NXT2Q9NPJ8 142 aaKnown RBP16.91■□□□□ 0.3
CCDC47-204ENST00000582252 TIMM8BQ9Y5J9 83 aaPredicted RBP16.91■□□□□ 0.3
CCDC47-204ENST00000582252 CTAG1AP78358 180 aa16.9■□□□□ 0.3
CCDC47-204ENST00000582252 PET117Q6UWS5 81 aa16.9■□□□□ 0.3
CCDC47-204ENST00000582252 MRAP2Q96G30 205 aa16.9■□□□□ 0.3
CCDC47-204ENST00000582252 SCRT2Q9NQ03 307 aa16.9■□□□□ 0.3
CCDC47-204ENST00000582252 TNFRSF6BO95407 300 aa16.9■□□□□ 0.3
CCDC47-204ENST00000582252 CDKN1BP46527 198 aa16.89■□□□□ 0.29
CCDC47-204ENST00000582252 TDRG1Q3Y452 100 aa16.89■□□□□ 0.29
CCDC47-204ENST00000582252 SPATA45Q537H7 98 aa16.89■□□□□ 0.29
CCDC47-204ENST00000582252 C14orf144Q96I85 54 aa16.89■□□□□ 0.29
CCDC47-204ENST00000582252 KIR3DS1Q14943 382 aa16.88■□□□□ 0.29
CCDC47-204ENST00000582252 DLX4Q92988 240 aaPredicted RBP16.88■□□□□ 0.29
CCDC47-204ENST00000582252 M0R381 172 aa16.87■□□□□ 0.29
CCDC47-204ENST00000582252 HBDP02042 147 aa16.87■□□□□ 0.29
CCDC47-204ENST00000582252 OR2K2Q8NGT1 345 aa16.87■□□□□ 0.29
CCDC47-204ENST00000582252 DPH3P1Q9H4G8 78 aa16.87■□□□□ 0.29
CCDC47-204ENST00000582252 TRAV12-3A0A0B4J271 114 aa16.87■□□□□ 0.29
CCDC47-204ENST00000582252 GNRH2O43555 120 aa16.87■□□□□ 0.29
CCDC47-204ENST00000582252 MIEN1Q9BRT3 115 aa16.87■□□□□ 0.29
CCDC47-204ENST00000582252 LINC01546A6NGU7 62 aa16.86■□□□□ 0.29
CCDC47-204ENST00000582252 RNASE3P12724 160 aaKnown RBP16.86■□□□□ 0.29
CCDC47-204ENST00000582252 ZNF705AQ6ZN79 300 aaPredicted RBP16.86■□□□□ 0.29
CCDC47-204ENST00000582252 LINC00173Q6ZV60 143 aa16.86■□□□□ 0.29
CCDC47-204ENST00000582252 AP1S3Q96PC3 154 aa16.86■□□□□ 0.29
CCDC47-204ENST00000582252 DUX3Q96PT4 197 aa16.86■□□□□ 0.29
CCDC47-204ENST00000582252 TRAV9-2A0A087WT02 112 aa16.85■□□□□ 0.29
CCDC47-204ENST00000582252 ZNF747Q9BV97 191 aa16.85■□□□□ 0.29
CCDC47-204ENST00000582252 PRSS47A8MTI9 375 aa16.84■□□□□ 0.29
CCDC47-204ENST00000582252 NXPH4O95158 308 aa16.84■□□□□ 0.29
CCDC47-204ENST00000582252 IGKV3-20P01619 116 aa16.84■□□□□ 0.29
CCDC47-204ENST00000582252 TSSC4Q9Y5U2 329 aaPredicted RBP16.84■□□□□ 0.29
CCDC47-204ENST00000582252 OR4C46A6NHA9 309 aa16.84■□□□□ 0.29
CCDC47-204ENST00000582252 CD7P09564 240 aa16.84■□□□□ 0.29
CCDC47-204ENST00000582252 PROK1P58294 105 aa16.84■□□□□ 0.29
CCDC47-204ENST00000582252 DEFB125Q8N687 156 aa16.84■□□□□ 0.29
CCDC47-204ENST00000582252 Q8N8P6 123 aa16.84■□□□□ 0.29
CCDC47-204ENST00000582252 FHL3Q13643 280 aa16.83■□□□□ 0.28
CCDC47-204ENST00000582252 SPATA12Q7Z6I5 190 aa16.83■□□□□ 0.28
CCDC47-204ENST00000582252 TMEM61Q8N0U2 210 aa16.83■□□□□ 0.28
CCDC47-204ENST00000582252 TRAV25A0A0B4J276 109 aa16.82■□□□□ 0.28
CCDC47-204ENST00000582252 DEFB131AP59861 70 aa16.82■□□□□ 0.28
CCDC47-204ENST00000582252 DEFB114Q30KQ6 69 aa16.82■□□□□ 0.28
CCDC47-204ENST00000582252 RAX2Q96IS3 184 aa16.82■□□□□ 0.28
CCDC47-204ENST00000582252 ATRQ13535 2644 aa16.82■□□□□ 0.28
CCDC47-204ENST00000582252 A0A096LNJ9 63 aa16.82■□□□□ 0.28
CCDC47-204ENST00000582252 CD28P10747 220 aa16.82■□□□□ 0.28
CCDC47-204ENST00000582252 HLA-DRB4P13762 266 aa16.82■□□□□ 0.28
CCDC47-204ENST00000582252 SPINK13Q1W4C9 94 aa16.82■□□□□ 0.28
CCDC47-204ENST00000582252 ATOH7Q8N100 152 aa16.82■□□□□ 0.28
CCDC47-204ENST00000582252 HLA-DRB4X5D2U9 266 aa16.82■□□□□ 0.28
CCDC47-204ENST00000582252 IGHV1OR15-1A0A075B7D0 117 aa16.81■□□□□ 0.28
CCDC47-204ENST00000582252 A8MTW9 85 aa16.81■□□□□ 0.28
CCDC47-204ENST00000582252 CCL24O00175 119 aa16.81■□□□□ 0.28
CCDC47-204ENST00000582252 PPP1R17O96001 155 aa16.81■□□□□ 0.28
CCDC47-204ENST00000582252 SMIM17P0DL12 118 aa16.81■□□□□ 0.28
CCDC47-204ENST00000582252 LBHQ53QV2 105 aaPredicted RBP16.81■□□□□ 0.28
CCDC47-204ENST00000582252 NRACQ8N912 160 aa16.81■□□□□ 0.28
CCDC47-204ENST00000582252 SPAG8Q99932 426 aaPredicted RBP16.81■□□□□ 0.28
CCDC47-204ENST00000582252 LINC01545Q5VT33 79 aa16.8■□□□□ 0.28
CCDC47-204ENST00000582252 AMTNQ6UX39 209 aa16.8■□□□□ 0.28
CCDC47-204ENST00000582252 MRPL52Q86TS9 123 aaKnown RBP16.8■□□□□ 0.28
CCDC47-204ENST00000582252 UQCR10Q9UDW1 63 aa16.8■□□□□ 0.28
CCDC47-204ENST00000582252 TRAV12-2A0A075B6T6 113 aa16.79■□□□□ 0.28
CCDC47-204ENST00000582252 HSBP1L1C9JCN9 74 aa16.79■□□□□ 0.28
CCDC47-204ENST00000582252 GAS8-AS1O95177 125 aa16.79■□□□□ 0.28
CCDC47-204ENST00000582252 GATA1P15976 413 aaPredicted RBP16.79■□□□□ 0.28
CCDC47-204ENST00000582252 FCER1GP30273 86 aa16.79■□□□□ 0.28
CCDC47-204ENST00000582252 C14orf178Q8N769 122 aaPredicted RBP16.79■□□□□ 0.28
CCDC47-204ENST00000582252 SYT8Q8NBV8 401 aa16.79■□□□□ 0.28
CCDC47-204ENST00000582252 A0A1W2PRX2 142 aa16.79■□□□□ 0.28
CCDC47-204ENST00000582252 WNK1Q9H4A3 2382 aa16.78■□□□□ 0.28
CCDC47-204ENST00000582252 TRGV11A0A075B6L2 103 aa16.78■□□□□ 0.28
CCDC47-204ENST00000582252 TRAV26-2A0A0B4J265 109 aa16.77■□□□□ 0.28
CCDC47-204ENST00000582252 IGHV3-16A0A0C4DH30 117 aa16.77■□□□□ 0.28
CCDC47-204ENST00000582252 KNCNA6PVL3 124 aa16.77■□□□□ 0.28
CCDC47-204ENST00000582252 H0Y8G0 127 aa16.77■□□□□ 0.28
CCDC47-204ENST00000582252 MGPP08493 103 aa16.77■□□□□ 0.28
CCDC47-204ENST00000582252 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.77■□□□□ 0.28
CCDC47-204ENST00000582252 C11orf44Q8N8P7 122 aa16.77■□□□□ 0.28
CCDC47-204ENST00000582252 C9orf85Q96MD7 179 aa16.77■□□□□ 0.28
CCDC47-204ENST00000582252 CITED2Q99967 270 aaPredicted RBP16.77■□□□□ 0.28
CCDC47-204ENST00000582252 C20orf78Q9BR46 151 aa16.77■□□□□ 0.28
CCDC47-204ENST00000582252 MAP6D1Q9H9H5 199 aa16.77■□□□□ 0.28
CCDC47-204ENST00000582252 IGLV2-18A0A075B6J9 118 aa16.76■□□□□ 0.27
CCDC47-204ENST00000582252 H3BMM0 161 aa16.76■□□□□ 0.27
CCDC47-204ENST00000582252 IGLC3P0DOY3 106 aa16.76■□□□□ 0.27
CCDC47-204ENST00000582252 CD300EQ496F6 205 aaPredicted RBP16.76■□□□□ 0.27
CCDC47-204ENST00000582252 POM121L12Q8N7R1 296 aa16.76■□□□□ 0.27
CCDC47-204ENST00000582252 IFI27L1Q96BM0 104 aa16.76■□□□□ 0.27
CCDC47-204ENST00000582252 ST20Q9HBF5 79 aa16.76■□□□□ 0.27
CCDC47-204ENST00000582252 LAGE3Q14657 143 aa16.75■□□□□ 0.27
CCDC47-204ENST00000582252 LGALS9BQ3B8N2 356 aa16.75■□□□□ 0.27
CCDC47-204ENST00000582252 LGALS9CQ6DKI2 356 aa16.75■□□□□ 0.27
CCDC47-204ENST00000582252 K7EMI3 77 aa16.74■□□□□ 0.27
CCDC47-204ENST00000582252 M0R143 59 aa16.74■□□□□ 0.27
CCDC47-204ENST00000582252 SPRY2O43597 315 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms