RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 C6orf223Q8N319 242 aa6.65□□□□□ -1.34
TOP3A-211ENST00000581536 OR4C5Q8NGB2 326 aa6.65□□□□□ -1.34
TOP3A-211ENST00000581536 KCNS1Q96KK3 526 aa6.65□□□□□ -1.34
TOP3A-211ENST00000581536 NDFIP1Q9BT67 221 aa6.65□□□□□ -1.34
TOP3A-211ENST00000581536 UPK3BQ9BT76 320 aa6.65□□□□□ -1.34
TOP3A-211ENST00000581536 MAP1LC3BQ9GZQ8 125 aa6.65□□□□□ -1.34
TOP3A-211ENST00000581536 SDF2L1Q9HCN8 221 aa6.65□□□□□ -1.34
TOP3A-211ENST00000581536 MRPS16Q9Y3D3 137 aaKnown RBP6.65□□□□□ -1.34
TOP3A-211ENST00000581536 TNFRSF18Q9Y5U5 241 aa6.65□□□□□ -1.34
TOP3A-211ENST00000581536 ICOSQ9Y6W8 199 aa6.65□□□□□ -1.34
TOP3A-211ENST00000581536 ARL2-SNX15V9GYD0 113 aa6.65□□□□□ -1.34
TOP3A-211ENST00000581536 DNAH5Q8TE73 4624 aa6.65□□□□□ -1.34
TOP3A-211ENST00000581536 IGHV3-73A0A0B4J1V6 119 aa6.64□□□□□ -1.35
TOP3A-211ENST00000581536 TRAV4A0A0B4J268 109 aa6.64□□□□□ -1.35
TOP3A-211ENST00000581536 A0A1B0GV50 99 aa6.64□□□□□ -1.35
TOP3A-211ENST00000581536 K7EQD1 137 aa6.64□□□□□ -1.35
TOP3A-211ENST00000581536 PEX7O00628 323 aa6.64□□□□□ -1.35
TOP3A-211ENST00000581536 PFN1P07737 140 aaKnown RBP6.64□□□□□ -1.35
TOP3A-211ENST00000581536 RNASE3P12724 160 aaKnown RBP6.64□□□□□ -1.35
TOP3A-211ENST00000581536 TMUB2Q71RG4 321 aa6.64□□□□□ -1.35
TOP3A-211ENST00000581536 ZNF575Q86XF7 245 aa6.64□□□□□ -1.35
TOP3A-211ENST00000581536 FAM210AQ96ND0 272 aa6.64□□□□□ -1.35
TOP3A-211ENST00000581536 LRP1BQ9NZR2 4599 aa6.64□□□□□ -1.35
TOP3A-211ENST00000581536 A0A0D9SG52 128 aa6.63□□□□□ -1.35
TOP3A-211ENST00000581536 PAGE4O60829 102 aa6.63□□□□□ -1.35
TOP3A-211ENST00000581536 PFDN1O60925 122 aa6.63□□□□□ -1.35
TOP3A-211ENST00000581536 GYPEP15421 78 aa6.63□□□□□ -1.35
TOP3A-211ENST00000581536 SLAQ13239 276 aa6.63□□□□□ -1.35
TOP3A-211ENST00000581536 ZNF345Q14585 488 aa6.63□□□□□ -1.35
TOP3A-211ENST00000581536 MRPL23Q16540 153 aaKnown RBP6.63□□□□□ -1.35
TOP3A-211ENST00000581536 LGALSLQ3ZCW2 172 aaPredicted RBP6.63□□□□□ -1.35
TOP3A-211ENST00000581536 ZNF876PQ49A33 203 aa6.63□□□□□ -1.35
TOP3A-211ENST00000581536 SOHLH1Q5JUK2 328 aa6.63□□□□□ -1.35
TOP3A-211ENST00000581536 SAPCD1Q5SSQ6 148 aa6.63□□□□□ -1.35
TOP3A-211ENST00000581536 CST9LP1Q5W188 147 aa6.63□□□□□ -1.35
TOP3A-211ENST00000581536 MBD3L1Q8WWY6 194 aa6.63□□□□□ -1.35
TOP3A-211ENST00000581536 ZNF471Q9BX82 626 aaPredicted RBP6.63□□□□□ -1.35
TOP3A-211ENST00000581536 HSPG2P98160 4391 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 RYR1P21817 5038 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 KANTRA0A1W2PQU2 76 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 FABP5P3A8MUU1 101 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 RS1O15537 224 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 BCL2L11O43521 198 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 NXPH4O95158 308 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 SEC11BP0C7V7 166 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 CCL20P78556 96 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 CFAP126Q5VTH2 177 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 NEGR1Q7Z3B1 354 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 FAM213BQ8TBF2 198 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 SFT2D1Q8WV19 159 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 ZC2HC1AQ96GY0 325 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 C9orf85Q96MD7 179 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 JPT2Q9H910 190 aa6.62□□□□□ -1.35
TOP3A-211ENST00000581536 A0A1B0GVG6 124 aa6.61□□□□□ -1.35
TOP3A-211ENST00000581536 GRIFINA4D1Z8 144 aa6.61□□□□□ -1.35
TOP3A-211ENST00000581536 SIVA1O15304 175 aa6.61□□□□□ -1.35
TOP3A-211ENST00000581536 ORM1P02763 201 aa6.61□□□□□ -1.35
TOP3A-211ENST00000581536 ZFP69Q49AA0 526 aa6.61□□□□□ -1.35
TOP3A-211ENST00000581536 ZNF506Q5JVG8 444 aa6.61□□□□□ -1.35
TOP3A-211ENST00000581536 Q6ZSN1 163 aa6.61□□□□□ -1.35
TOP3A-211ENST00000581536 Q86TA4 180 aa6.61□□□□□ -1.35
TOP3A-211ENST00000581536 SLC25A29Q8N8R3 303 aa6.61□□□□□ -1.35
TOP3A-211ENST00000581536 HIST1H2BAQ96A08 127 aa6.61□□□□□ -1.35
TOP3A-211ENST00000581536 NKX6-2Q9C056 277 aaPredicted RBP6.61□□□□□ -1.35
TOP3A-211ENST00000581536 Q9UF83 564 aa6.61□□□□□ -1.35
TOP3A-211ENST00000581536 FBLL1A6NHQ2 334 aaKnown RBP6.6□□□□□ -1.35
TOP3A-211ENST00000581536 KRBOX1C9JBD0 128 aa6.6□□□□□ -1.35
TOP3A-211ENST00000581536 M0R036 132 aa6.6□□□□□ -1.35
TOP3A-211ENST00000581536 SH2D1AO60880 128 aa6.6□□□□□ -1.35
TOP3A-211ENST00000581536 GATA1P15976 413 aaPredicted RBP6.6□□□□□ -1.35
TOP3A-211ENST00000581536 SRIP30626 198 aa6.6□□□□□ -1.35
TOP3A-211ENST00000581536 PPT1P50897 306 aa6.6□□□□□ -1.35
TOP3A-211ENST00000581536 WFDC10BQ8IUB3 73 aa6.6□□□□□ -1.35
TOP3A-211ENST00000581536 NHLRC2Q8NBF2 726 aa6.6□□□□□ -1.35
TOP3A-211ENST00000581536 STOML3Q8TAV4 291 aa6.6□□□□□ -1.35
TOP3A-211ENST00000581536 SAMD10Q9BYL1 202 aa6.6□□□□□ -1.35
TOP3A-211ENST00000581536 KRTAP17-1Q9BYP8 105 aa6.6□□□□□ -1.35
TOP3A-211ENST00000581536 PCLOQ9Y6V0 5065 aa6.6□□□□□ -1.35
TOP3A-211ENST00000581536 APOBP04114 4563 aaKnown RBP6.59□□□□□ -1.35
TOP3A-211ENST00000581536 TMSB15BA0A087X1C1 80 aa6.59□□□□□ -1.35
TOP3A-211ENST00000581536 B4DEV8 164 aa6.59□□□□□ -1.35
TOP3A-211ENST00000581536 UMAD1C9J7I0 102 aa6.59□□□□□ -1.35
TOP3A-211ENST00000581536 FUSP35637 526 aaKnown RBP eCLIP6.59□□□□□ -1.35
TOP3A-211ENST00000581536 LINC00315P59091 139 aa6.59□□□□□ -1.35
TOP3A-211ENST00000581536 ZNF674Q2M3X9 581 aa6.59□□□□□ -1.35
TOP3A-211ENST00000581536 Q6ZNX1 250 aa6.59□□□□□ -1.35
TOP3A-211ENST00000581536 PTH2Q96A98 100 aa6.59□□□□□ -1.35
TOP3A-211ENST00000581536 ZFP30Q9Y2G7 519 aa6.59□□□□□ -1.35
TOP3A-211ENST00000581536 TRBV6-1A0A0K0K1D8 114 aa6.58□□□□□ -1.36
TOP3A-211ENST00000581536 A0A1W2PPQ1 181 aa6.58□□□□□ -1.36
TOP3A-211ENST00000581536 H3BVH4 76 aa6.58□□□□□ -1.36
TOP3A-211ENST00000581536 LTAP01374 205 aa6.58□□□□□ -1.36
TOP3A-211ENST00000581536 ARMS2P0C7Q2 107 aa6.58□□□□□ -1.36
TOP3A-211ENST00000581536 S100A4P26447 101 aaKnown RBP6.58□□□□□ -1.36
TOP3A-211ENST00000581536 KRTAP10-2P60368 255 aa6.58□□□□□ -1.36
TOP3A-211ENST00000581536 UBE2G1P62253 170 aa6.58□□□□□ -1.36
TOP3A-211ENST00000581536 GAGE13Q4V321 117 aa6.58□□□□□ -1.36
TOP3A-211ENST00000581536 Q6ZRN7 208 aaPredicted RBP6.58□□□□□ -1.36
TOP3A-211ENST00000581536 COX8CQ7Z4L0 72 aa6.58□□□□□ -1.36
TOP3A-211ENST00000581536 PCNPQ8WW12 178 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms