RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 OR2T35Q8NGX2 323 aa6.46□□□□□ -1.38
RFFL-208ENST00000581039 UBE2WQ96B02 151 aa6.46□□□□□ -1.38
RFFL-208ENST00000581039 DAZAP1Q96EP5 407 aaKnown RBP6.46□□□□□ -1.38
RFFL-208ENST00000581039 DNAJC30Q96LL9 226 aa6.46□□□□□ -1.38
RFFL-208ENST00000581039 C9orf85Q96MD7 179 aa6.46□□□□□ -1.38
RFFL-208ENST00000581039 NUDT15Q9NV35 164 aa6.46□□□□□ -1.38
RFFL-208ENST00000581039 KLK12Q9UKR0 248 aa6.46□□□□□ -1.38
RFFL-208ENST00000581039 A8MWV9 139 aa6.45□□□□□ -1.38
RFFL-208ENST00000581039 HNRNPA3P51991 378 aaKnown RBP6.45□□□□□ -1.38
RFFL-208ENST00000581039 ELOBQ15370 118 aa6.45□□□□□ -1.38
RFFL-208ENST00000581039 LGALSLQ3ZCW2 172 aaPredicted RBP6.45□□□□□ -1.38
RFFL-208ENST00000581039 KCNIP4Q6PIL6 250 aa6.45□□□□□ -1.38
RFFL-208ENST00000581039 NIT1Q86X76 327 aa6.45□□□□□ -1.38
RFFL-208ENST00000581039 OR10G9Q8NGN4 311 aa6.45□□□□□ -1.38
RFFL-208ENST00000581039 SGK494Q96LW2 274 aa6.45□□□□□ -1.38
RFFL-208ENST00000581039 C11orf21Q9P2W6 132 aa6.45□□□□□ -1.38
RFFL-208ENST00000581039 A0A087WX48 190 aa6.44□□□□□ -1.38
RFFL-208ENST00000581039 EIF3GO75821 320 aaKnown RBP eCLIP6.44□□□□□ -1.38
RFFL-208ENST00000581039 GCGP01275 180 aa6.44□□□□□ -1.38
RFFL-208ENST00000581039 H2AFB2P0C5Z0 115 aa6.44□□□□□ -1.38
RFFL-208ENST00000581039 LINC00694P0DN24 101 aa6.44□□□□□ -1.38
RFFL-208ENST00000581039 ZNF80P51504 273 aaPredicted RBP6.44□□□□□ -1.38
RFFL-208ENST00000581039 GNG5P63218 68 aa6.44□□□□□ -1.38
RFFL-208ENST00000581039 Q0VG73 95 aa6.44□□□□□ -1.38
RFFL-208ENST00000581039 SCGB1C1Q8TD33 95 aa6.44□□□□□ -1.38
RFFL-208ENST00000581039 SAMD10Q9BYL1 202 aa6.44□□□□□ -1.38
RFFL-208ENST00000581039 PARLQ9H300 379 aa6.44□□□□□ -1.38
RFFL-208ENST00000581039 RNF213Q63HN8 5207 aa6.43□□□□□ -1.38
RFFL-208ENST00000581039 SERTM2A0A1B0GWG4 89 aa6.43□□□□□ -1.38
RFFL-208ENST00000581039 A0A1W2PPV4 95 aa6.43□□□□□ -1.38
RFFL-208ENST00000581039 K7EQM0 130 aa6.43□□□□□ -1.38
RFFL-208ENST00000581039 RNASE3P12724 160 aaKnown RBP6.43□□□□□ -1.38
RFFL-208ENST00000581039 S100A4P26447 101 aaKnown RBP6.43□□□□□ -1.38
RFFL-208ENST00000581039 ZFP69Q49AA0 526 aa6.43□□□□□ -1.38
RFFL-208ENST00000581039 LRRC37A5PQ49AS3 106 aa6.43□□□□□ -1.38
RFFL-208ENST00000581039 PQLC2Q6ZP29 291 aa6.43□□□□□ -1.38
RFFL-208ENST00000581039 TMEM75Q8N9X5 138 aa6.43□□□□□ -1.38
RFFL-208ENST00000581039 OR5AC2Q9NZP5 309 aa6.43□□□□□ -1.38
RFFL-208ENST00000581039 Q9UF83 564 aa6.43□□□□□ -1.38
RFFL-208ENST00000581039 MT1HL1P0DM35 61 aa6.42□□□□□ -1.38
RFFL-208ENST00000581039 SMUG1Q53HV7 270 aa6.42□□□□□ -1.38
RFFL-208ENST00000581039 PIK3CD-AS1Q5SR53 167 aa6.42□□□□□ -1.38
RFFL-208ENST00000581039 DMRTA1Q5VZB9 504 aa6.42□□□□□ -1.38
RFFL-208ENST00000581039 ATRAIDQ6UW56 229 aa6.42□□□□□ -1.38
RFFL-208ENST00000581039 Q6ZRU5 148 aa6.42□□□□□ -1.38
RFFL-208ENST00000581039 C14orf178Q8N769 122 aaPredicted RBP6.42□□□□□ -1.38
RFFL-208ENST00000581039 LINC00479Q96M42 142 aa6.42□□□□□ -1.38
RFFL-208ENST00000581039 CHCHD7Q9BUK0 85 aa6.42□□□□□ -1.38
RFFL-208ENST00000581039 C1orf43Q9BWL3 253 aa6.42□□□□□ -1.38
RFFL-208ENST00000581039 PSG8Q9UQ74 426 aa6.42□□□□□ -1.38
RFFL-208ENST00000581039 FAM240BA0A1B0GVZ2 78 aa6.41□□□□□ -1.38
RFFL-208ENST00000581039 TMEM262E9PQX1 116 aa6.41□□□□□ -1.38
RFFL-208ENST00000581039 H0YIZ8 118 aa6.41□□□□□ -1.38
RFFL-208ENST00000581039 SIX6O95475 246 aa6.41□□□□□ -1.38
RFFL-208ENST00000581039 TCRAP04437 139 aa6.41□□□□□ -1.38
RFFL-208ENST00000581039 OR2G3Q8NGZ4 309 aa6.41□□□□□ -1.38
RFFL-208ENST00000581039 JPT2Q9H910 190 aa6.41□□□□□ -1.38
RFFL-208ENST00000581039 A0A0D9SG52 128 aa6.4□□□□□ -1.38
RFFL-208ENST00000581039 HMGB3O15347 200 aaKnown RBP6.4□□□□□ -1.38
RFFL-208ENST00000581039 ASIPP42127 132 aa6.4□□□□□ -1.38
RFFL-208ENST00000581039 CYCSP99999 105 aaKnown RBP6.4□□□□□ -1.38
RFFL-208ENST00000581039 SAPCD1Q5SSQ6 148 aa6.4□□□□□ -1.38
RFFL-208ENST00000581039 DGAT2L7PQ6IED9 249 aa6.4□□□□□ -1.38
RFFL-208ENST00000581039 UFSP1Q6NVU6 142 aa6.4□□□□□ -1.38
RFFL-208ENST00000581039 PRNTQ86SH4 94 aa6.4□□□□□ -1.38
RFFL-208ENST00000581039 C5orf17Q8NAS9 161 aa6.4□□□□□ -1.38
RFFL-208ENST00000581039 SMIM3Q9BZL3 60 aa6.4□□□□□ -1.38
RFFL-208ENST00000581039 RBM38Q9H0Z9 239 aaKnown RBP6.4□□□□□ -1.38
RFFL-208ENST00000581039 LRP2P98164 4655 aa6.39□□□□□ -1.39
RFFL-208ENST00000581039 IGKV3D-20A0A0C4DH25 116 aa6.39□□□□□ -1.39
RFFL-208ENST00000581039 USP17L23D6RBM5 183 aa6.39□□□□□ -1.39
RFFL-208ENST00000581039 RHODO00212 210 aa6.39□□□□□ -1.39
RFFL-208ENST00000581039 CRPP02741 224 aa6.39□□□□□ -1.39
RFFL-208ENST00000581039 FLI1Q01543 452 aaPredicted RBP6.39□□□□□ -1.39
RFFL-208ENST00000581039 FAM74A4Q5TZK3 123 aa6.39□□□□□ -1.39
RFFL-208ENST00000581039 ENHOQ6UWT2 76 aa6.39□□□□□ -1.39
RFFL-208ENST00000581039 OR10G7Q8NGN6 311 aa6.39□□□□□ -1.39
RFFL-208ENST00000581039 ZC2HC1AQ96GY0 325 aa6.39□□□□□ -1.39
RFFL-208ENST00000581039 DPH3P1Q9H4G8 78 aa6.39□□□□□ -1.39
RFFL-208ENST00000581039 HSPB11Q9Y547 144 aa6.39□□□□□ -1.39
RFFL-208ENST00000581039 FABP5P3A8MUU1 101 aa6.38□□□□□ -1.39
RFFL-208ENST00000581039 HLA-DQA1P01909 254 aa6.38□□□□□ -1.39
RFFL-208ENST00000581039 PRSS1P07477 247 aa6.38□□□□□ -1.39
RFFL-208ENST00000581039 RAB2AP61019 212 aa6.38□□□□□ -1.39
RFFL-208ENST00000581039 MZT2BQ6NZ67 158 aa6.38□□□□□ -1.39
RFFL-208ENST00000581039 C15orf54Q8N8G6 183 aa6.38□□□□□ -1.39
RFFL-208ENST00000581039 C9orf163Q8N9P6 203 aa6.38□□□□□ -1.39
RFFL-208ENST00000581039 HSD17B11Q8NBQ5 300 aa6.38□□□□□ -1.39
RFFL-208ENST00000581039 DPH3Q96FX2 82 aa6.38□□□□□ -1.39
RFFL-208ENST00000581039 IL36BQ9NZH7 164 aa6.38□□□□□ -1.39
RFFL-208ENST00000581039 EPDR1Q9UM22 224 aa6.38□□□□□ -1.39
RFFL-208ENST00000581039 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.38□□□□□ -1.39
RFFL-208ENST00000581039 PKHD1L1Q86WI1 4243 aa6.37□□□□□ -1.39
RFFL-208ENST00000581039 ARL14EPLP0DKL9 152 aa6.37□□□□□ -1.39
RFFL-208ENST00000581039 RPL12P30050 165 aaKnown RBP6.37□□□□□ -1.39
RFFL-208ENST00000581039 SUMO1P63165 101 aaKnown RBP6.37□□□□□ -1.39
RFFL-208ENST00000581039 RPL36AP83881 106 aaKnown RBP6.37□□□□□ -1.39
RFFL-208ENST00000581039 OR11H4Q8NGC9 324 aa6.37□□□□□ -1.39
RFFL-208ENST00000581039 PPP1R1CQ8WVI7 109 aa6.37□□□□□ -1.39
RFFL-208ENST00000581039 RPL36ALQ969Q0 106 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms