RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 FER1L6-AS1Q8NA97 138 aa10.24□□□□□ -0.77
SKA2-205ENST00000580541 BORCS7Q96B45 105 aa10.24□□□□□ -0.77
SKA2-205ENST00000580541 C9orf85Q96MD7 179 aa10.24□□□□□ -0.77
SKA2-205ENST00000580541 CTDSP1Q9GZU7 261 aa10.24□□□□□ -0.77
SKA2-205ENST00000580541 TRGV1A0A0A0MS02 117 aa10.23□□□□□ -0.77
SKA2-205ENST00000580541 PLAC8L1A1L4L8 177 aa10.23□□□□□ -0.77
SKA2-205ENST00000580541 H3BVH4 76 aa10.23□□□□□ -0.77
SKA2-205ENST00000580541 SPINK4O60575 86 aa10.23□□□□□ -0.77
SKA2-205ENST00000580541 RNASE3P12724 160 aaKnown RBP10.23□□□□□ -0.77
SKA2-205ENST00000580541 FOXA3P55318 350 aaPredicted RBP10.23□□□□□ -0.77
SKA2-205ENST00000580541 DAD1P61803 113 aa10.23□□□□□ -0.77
SKA2-205ENST00000580541 CACNG7P62955 275 aa10.23□□□□□ -0.77
SKA2-205ENST00000580541 RHEBQ15382 184 aa10.23□□□□□ -0.77
SKA2-205ENST00000580541 ZNF876PQ49A33 203 aa10.23□□□□□ -0.77
SKA2-205ENST00000580541 WDR73Q6P4I2 378 aa10.23□□□□□ -0.77
SKA2-205ENST00000580541 ZFP82Q8N141 532 aa10.23□□□□□ -0.77
SKA2-205ENST00000580541 RASL10AQ92737 203 aa10.23□□□□□ -0.77
SKA2-205ENST00000580541 SSBP4Q9BWG4 385 aaPredicted RBP10.23□□□□□ -0.77
SKA2-205ENST00000580541 V9GYV3 84 aa10.23□□□□□ -0.77
SKA2-205ENST00000580541 TRGV2A0A075B6R0 118 aa10.22□□□□□ -0.77
SKA2-205ENST00000580541 CIDEAO60543 219 aa10.22□□□□□ -0.77
SKA2-205ENST00000580541 RNF212Q495C1 297 aa10.22□□□□□ -0.77
SKA2-205ENST00000580541 SPANXN1Q5VSR9 72 aa10.22□□□□□ -0.77
SKA2-205ENST00000580541 TPPP3Q9BW30 176 aa10.22□□□□□ -0.77
SKA2-205ENST00000580541 SCRT2Q9NQ03 307 aa10.22□□□□□ -0.77
SKA2-205ENST00000580541 SNAI2O43623 268 aa10.21□□□□□ -0.77
SKA2-205ENST00000580541 DEFB130BP0DP73 79 aa10.21□□□□□ -0.77
SKA2-205ENST00000580541 DEFB130AP0DP74 79 aa10.21□□□□□ -0.77
SKA2-205ENST00000580541 GZMBP10144 247 aa10.21□□□□□ -0.77
SKA2-205ENST00000580541 CLRN3Q8NCR9 226 aa10.21□□□□□ -0.77
SKA2-205ENST00000580541 TMEM242Q9NWH2 141 aa10.21□□□□□ -0.77
SKA2-205ENST00000580541 NAT8BQ9UHF3 227 aa10.21□□□□□ -0.77
SKA2-205ENST00000580541 A0A087WWC5 75 aa10.2□□□□□ -0.78
SKA2-205ENST00000580541 GAGE12BA1L429 117 aa10.2□□□□□ -0.78
SKA2-205ENST00000580541 A8MWV9 139 aa10.2□□□□□ -0.78
SKA2-205ENST00000580541 GAGE7O76087 117 aa10.2□□□□□ -0.78
SKA2-205ENST00000580541 IGLC6P0CF74 106 aa10.2□□□□□ -0.78
SKA2-205ENST00000580541 GAGE12FP0CL80 117 aa10.2□□□□□ -0.78
SKA2-205ENST00000580541 GAGE12GP0CL81 117 aa10.2□□□□□ -0.78
SKA2-205ENST00000580541 GAGE12IP0CL82 117 aa10.2□□□□□ -0.78
SKA2-205ENST00000580541 ZNF575Q86XF7 245 aa10.2□□□□□ -0.78
SKA2-205ENST00000580541 C18orf15Q96N68 181 aa10.2□□□□□ -0.78
SKA2-205ENST00000580541 IMMP2LQ96T52 175 aa10.2□□□□□ -0.78
SKA2-205ENST00000580541 SMIM27A0A1W2PRY6 76 aa10.19□□□□□ -0.78
SKA2-205ENST00000580541 C7orf77A4D0Y5 90 aa10.19□□□□□ -0.78
SKA2-205ENST00000580541 HIGD1CA8MV81 97 aa10.19□□□□□ -0.78
SKA2-205ENST00000580541 M0R381 172 aa10.19□□□□□ -0.78
SKA2-205ENST00000580541 KCNIP4Q6PIL6 250 aa10.19□□□□□ -0.78
SKA2-205ENST00000580541 LYZL1Q6UWQ5 148 aa10.19□□□□□ -0.78
SKA2-205ENST00000580541 Q6ZTI0 123 aa10.19□□□□□ -0.78
SKA2-205ENST00000580541 SMIM15Q7Z3B0 74 aa10.19□□□□□ -0.78
SKA2-205ENST00000580541 LINC00612Q8N6U2 182 aa10.19□□□□□ -0.78
SKA2-205ENST00000580541 EDA2RQ9HAV5 297 aa10.19□□□□□ -0.78
SKA2-205ENST00000580541 MRPL16Q9NX20 251 aaKnown RBP10.19□□□□□ -0.78
SKA2-205ENST00000580541 PRKDCP78527 4128 aaKnown RBP10.19□□□□□ -0.78
SKA2-205ENST00000580541 ATP5G1P05496 136 aa10.18□□□□□ -0.78
SKA2-205ENST00000580541 S100PP25815 95 aa10.18□□□□□ -0.78
SKA2-205ENST00000580541 CTRLP40313 264 aa10.18□□□□□ -0.78
SKA2-205ENST00000580541 OR4C5Q8NGB2 326 aa10.18□□□□□ -0.78
SKA2-205ENST00000580541 PGLYRP4Q96LB8 373 aa10.18□□□□□ -0.78
SKA2-205ENST00000580541 RPS10P5Q9NQ39 176 aa10.18□□□□□ -0.78
SKA2-205ENST00000580541 MUC4Q99102 2169 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 IGHV4-4A0A075B6R2 117 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 TRAV4A0A0B4J268 109 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 A0A1B0GUT8 65 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 A0A1B0GW15 77 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 TRGC1P0CF51 173 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 SMIM17P0DL12 118 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 SLAQ13239 276 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 RIGQ13278 110 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 TWIST1Q15672 202 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 C12orf74Q32Q52 190 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 GTSF1Q8WW33 167 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 CNFNQ9BYD5 112 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 CELA1Q9UNI1 258 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 DNAH9Q9NYC9 4486 aa10.17□□□□□ -0.78
SKA2-205ENST00000580541 RHODO00212 210 aa10.16□□□□□ -0.78
SKA2-205ENST00000580541 S100A8P05109 93 aa10.16□□□□□ -0.78
SKA2-205ENST00000580541 NTF3P20783 257 aa10.16□□□□□ -0.78
SKA2-205ENST00000580541 NUP35Q8NFH5 326 aa10.16□□□□□ -0.78
SKA2-205ENST00000580541 OR10AG1Q8NH19 301 aa10.16□□□□□ -0.78
SKA2-205ENST00000580541 BTF3L4Q96K17 158 aa10.16□□□□□ -0.78
SKA2-205ENST00000580541 WWC2-AS2Q96NR7 200 aa10.16□□□□□ -0.78
SKA2-205ENST00000580541 TRAV9-1A0A075B6T8 112 aa10.15□□□□□ -0.78
SKA2-205ENST00000580541 TRAV10A0A0B4J240 114 aa10.15□□□□□ -0.78
SKA2-205ENST00000580541 NXPH4O95158 308 aa10.15□□□□□ -0.78
SKA2-205ENST00000580541 NANOS2P60321 138 aaKnown RBP10.15□□□□□ -0.78
SKA2-205ENST00000580541 SSTP61278 116 aa10.15□□□□□ -0.78
SKA2-205ENST00000580541 ZFP2Q6ZN57 461 aa10.15□□□□□ -0.78
SKA2-205ENST00000580541 AP1S3Q96PC3 154 aa10.15□□□□□ -0.78
SKA2-205ENST00000580541 TENM3Q9P273 2699 aa10.14□□□□□ -0.79
SKA2-205ENST00000580541 HUWE1Q7Z6Z7 4374 aaKnown RBP10.14□□□□□ -0.79
SKA2-205ENST00000580541 RS1O15537 224 aa10.14□□□□□ -0.79
SKA2-205ENST00000580541 S100A1P23297 94 aa10.14□□□□□ -0.79
SKA2-205ENST00000580541 DEFB131BA0A096LNP1 70 aa10.13□□□□□ -0.79
SKA2-205ENST00000580541 TRGV4A0A0C4DH28 118 aa10.13□□□□□ -0.79
SKA2-205ENST00000580541 MUC21A0A0G2JKD1 596 aa10.13□□□□□ -0.79
SKA2-205ENST00000580541 MUC21A0A140T8X8 626 aa10.13□□□□□ -0.79
SKA2-205ENST00000580541 CFAP126Q5VTH2 177 aa10.13□□□□□ -0.79
SKA2-205ENST00000580541 Q6ZTC4 211 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms