RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 C12orf54Q6X4T0 127 aa7.96□□□□□ -1.13
TOP3A-209ENST00000580095 CNFNQ9BYD5 112 aa7.96□□□□□ -1.13
TOP3A-209ENST00000580095 TEX15Q9BXT5 2789 aa7.96□□□□□ -1.14
TOP3A-209ENST00000580095 C19orf54Q5BKX5 351 aa7.96□□□□□ -1.14
TOP3A-209ENST00000580095 OR4X2Q8NGF9 303 aa7.96□□□□□ -1.14
TOP3A-209ENST00000580095 OR2K2Q8NGT1 345 aa7.96□□□□□ -1.14
TOP3A-209ENST00000580095 TMEM190Q8WZ59 177 aa7.96□□□□□ -1.14
TOP3A-209ENST00000580095 FOXC2Q99958 501 aa7.96□□□□□ -1.14
TOP3A-209ENST00000580095 RBAKDNA6NC62 111 aa7.96□□□□□ -1.14
TOP3A-209ENST00000580095 GNRH2O43555 120 aa7.96□□□□□ -1.14
TOP3A-209ENST00000580095 RPL24P83731 157 aaKnown RBP7.96□□□□□ -1.14
TOP3A-209ENST00000580095 LGALS9BQ3B8N2 356 aa7.96□□□□□ -1.14
TOP3A-209ENST00000580095 LGALS9CQ6DKI2 356 aa7.96□□□□□ -1.14
TOP3A-209ENST00000580095 C10orf105Q8TEF2 133 aa7.96□□□□□ -1.14
TOP3A-209ENST00000580095 C9orf47Q6ZRZ4 202 aa7.95□□□□□ -1.14
TOP3A-209ENST00000580095 GTSCR1Q86UQ5 136 aa7.95□□□□□ -1.14
TOP3A-209ENST00000580095 MTURNQ8N3F0 131 aa7.95□□□□□ -1.14
TOP3A-209ENST00000580095 C14orf178Q8N769 122 aaPredicted RBP7.95□□□□□ -1.14
TOP3A-209ENST00000580095 RAB37Q96AX2 223 aa7.95□□□□□ -1.14
TOP3A-209ENST00000580095 TMEM97Q5BJF2 176 aa7.95□□□□□ -1.14
TOP3A-209ENST00000580095 MRPL16Q9NX20 251 aaKnown RBP7.95□□□□□ -1.14
TOP3A-209ENST00000580095 USP24Q9UPU5 2620 aa7.94□□□□□ -1.14
TOP3A-209ENST00000580095 FAM223BA6NKX1 122 aa7.94□□□□□ -1.14
TOP3A-209ENST00000580095 IGKV3-20P01619 116 aa7.94□□□□□ -1.14
TOP3A-209ENST00000580095 S100A4P26447 101 aaKnown RBP7.94□□□□□ -1.14
TOP3A-209ENST00000580095 FCER1GP30273 86 aa7.94□□□□□ -1.14
TOP3A-209ENST00000580095 FAM223AQ8IWN6 122 aa7.94□□□□□ -1.14
TOP3A-209ENST00000580095 ZFAND2AQ8N6M9 145 aa7.94□□□□□ -1.14
TOP3A-209ENST00000580095 RHPN1-AS1Q9BWJ2 59 aa7.94□□□□□ -1.14
TOP3A-209ENST00000580095 TMEM160Q9NX00 188 aa7.94□□□□□ -1.14
TOP3A-209ENST00000580095 CCDC168Q8NDH2 2452 aa7.94□□□□□ -1.14
TOP3A-209ENST00000580095 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.94□□□□□ -1.14
TOP3A-209ENST00000580095 NRACQ8N912 160 aa7.94□□□□□ -1.14
TOP3A-209ENST00000580095 RPL39LQ96EH5 51 aaKnown RBP7.94□□□□□ -1.14
TOP3A-209ENST00000580095 NF1P21359 2839 aa7.93□□□□□ -1.14
TOP3A-209ENST00000580095 KLK9Q2XQG4 91 aa7.93□□□□□ -1.14
TOP3A-209ENST00000580095 ANXA2RQ3ZCQ2 193 aa7.93□□□□□ -1.14
TOP3A-209ENST00000580095 FOXI2Q6ZQN5 318 aa7.93□□□□□ -1.14
TOP3A-209ENST00000580095 OR10J6PQ8NGY7 276 aa7.93□□□□□ -1.14
TOP3A-209ENST00000580095 NXT2Q9NPJ8 142 aaKnown RBP7.93□□□□□ -1.14
TOP3A-209ENST00000580095 KLK9Q9UKQ9 250 aa7.93□□□□□ -1.14
TOP3A-209ENST00000580095 ERG28Q9UKR5 140 aa7.93□□□□□ -1.14
TOP3A-209ENST00000580095 C9orf118A6NHY6 69 aa7.93□□□□□ -1.14
TOP3A-209ENST00000580095 PRB1P04280 392 aa7.93□□□□□ -1.14
TOP3A-209ENST00000580095 MSMBP08118 114 aa7.93□□□□□ -1.14
TOP3A-209ENST00000580095 MGPP08493 103 aa7.93□□□□□ -1.14
TOP3A-209ENST00000580095 IGLV2-18A0A075B6J9 118 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 A1L4Q6 167 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 H3BUT2 72 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 IGHV4-59P01825 116 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 IGHG2P01859 326 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 SRSF2Q01130 221 aaKnown RBP7.92□□□□□ -1.14
TOP3A-209ENST00000580095 C9orf139Q6ZV77 190 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 NOTCH3Q9UM47 2321 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 A4D1N5 150 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 A6NDX4 124 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 B5MCH6 92 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 HIST2H2BDQ6DRA6 164 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 ZNF418Q8TF45 676 aaPredicted RBP7.92□□□□□ -1.14
TOP3A-209ENST00000580095 JPT2Q9H910 190 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 MRPL35Q9NZE8 188 aaKnown RBP7.92□□□□□ -1.14
TOP3A-209ENST00000580095 HHLA3Q9XRX5 114 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 AGRNO00468 2067 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 NIPBLQ6KC79 2804 aaeCLIP7.92□□□□□ -1.14
TOP3A-209ENST00000580095 NDUFA4O00483 81 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 ZC2HC1BQ5TFG8 222 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 Q8N8P6 123 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 DUX5Q96PT3 197 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 PHLDA3Q9Y5J5 127 aa7.92□□□□□ -1.14
TOP3A-209ENST00000580095 SOCS3O14543 225 aa7.91□□□□□ -1.14
TOP3A-209ENST00000580095 GAGE5Q13069 117 aa7.91□□□□□ -1.14
TOP3A-209ENST00000580095 GAGE6Q13070 117 aa7.91□□□□□ -1.14
TOP3A-209ENST00000580095 OR5A1Q8NGJ0 315 aa7.91□□□□□ -1.14
TOP3A-209ENST00000580095 LAGE3Q14657 143 aa7.9□□□□□ -1.14
TOP3A-209ENST00000580095 ADAMTSL5Q6ZMM2 481 aa7.9□□□□□ -1.14
TOP3A-209ENST00000580095 MRPL53Q96EL3 112 aaKnown RBP7.9□□□□□ -1.14
TOP3A-209ENST00000580095 K7ERJ3 54 aa7.9□□□□□ -1.15
TOP3A-209ENST00000580095 M0QXV9 152 aa7.9□□□□□ -1.15
TOP3A-209ENST00000580095 IGKCP01834 107 aa7.9□□□□□ -1.15
TOP3A-209ENST00000580095 GCSHP23434 173 aa7.9□□□□□ -1.15
TOP3A-209ENST00000580095 DEFB112Q30KQ8 113 aa7.9□□□□□ -1.15
TOP3A-209ENST00000580095 WNK1Q9H4A3 2382 aa7.9□□□□□ -1.15
TOP3A-209ENST00000580095 TRAV12-2A0A075B6T6 113 aa7.89□□□□□ -1.15
TOP3A-209ENST00000580095 ZNF688P0C7X2 276 aa7.89□□□□□ -1.15
TOP3A-209ENST00000580095 RASL10AQ92737 203 aa7.89□□□□□ -1.15
TOP3A-209ENST00000580095 SPCS1Q9Y6A9 102 aa7.89□□□□□ -1.15
TOP3A-209ENST00000580095 TRAV21A0A0B4J279 112 aa7.89□□□□□ -1.15
TOP3A-209ENST00000580095 ASIPP42127 132 aa7.89□□□□□ -1.15
TOP3A-209ENST00000580095 MYOZ3Q8TDC0 251 aa7.89□□□□□ -1.15
TOP3A-209ENST00000580095 LINC00477Q96M19 166 aa7.89□□□□□ -1.15
TOP3A-209ENST00000580095 DAZ1Q9NQZ3 744 aaKnown RBP7.89□□□□□ -1.15
TOP3A-209ENST00000580095 A0A087WWL8 130 aa7.89□□□□□ -1.15
TOP3A-209ENST00000580095 TRAV12-3A0A0B4J271 114 aa7.89□□□□□ -1.15
TOP3A-209ENST00000580095 A0A0G2JLM5 398 aa7.89□□□□□ -1.15
TOP3A-209ENST00000580095 H3BRM9 83 aa7.89□□□□□ -1.15
TOP3A-209ENST00000580095 MAPKAPK5-AS1Q8N8E1 139 aa7.89□□□□□ -1.15
TOP3A-209ENST00000580095 MUC4Q99102 2169 aa7.88□□□□□ -1.15
TOP3A-209ENST00000580095 DPM2O94777 84 aa7.88□□□□□ -1.15
TOP3A-209ENST00000580095 RNASE3P12724 160 aaKnown RBP7.88□□□□□ -1.15
TOP3A-209ENST00000580095 CRIP2P52943 208 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms