RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 PRAC2D3DTV9 90 aa6.38□□□□□ -1.39
SMARCD2-208ENST00000580054 FAM229AH3BQW9 127 aa6.38□□□□□ -1.39
SMARCD2-208ENST00000580054 GPX1P07203 203 aa6.38□□□□□ -1.39
SMARCD2-208ENST00000580054 MGST1P10620 155 aaKnown RBP6.38□□□□□ -1.39
SMARCD2-208ENST00000580054 HTN1P15515 57 aa6.38□□□□□ -1.39
SMARCD2-208ENST00000580054 S100A1P23297 94 aa6.38□□□□□ -1.39
SMARCD2-208ENST00000580054 ERCC8Q13216 396 aa6.38□□□□□ -1.39
SMARCD2-208ENST00000580054 CENPWQ5EE01 88 aa6.38□□□□□ -1.39
SMARCD2-208ENST00000580054 Q86TA4 180 aa6.38□□□□□ -1.39
SMARCD2-208ENST00000580054 TMEM183AQ8IXX5 376 aa6.38□□□□□ -1.39
SMARCD2-208ENST00000580054 TMEM256Q8N2U0 113 aa6.38□□□□□ -1.39
SMARCD2-208ENST00000580054 C16orf74Q96GX8 76 aa6.38□□□□□ -1.39
SMARCD2-208ENST00000580054 VGLL1Q99990 258 aa6.38□□□□□ -1.39
SMARCD2-208ENST00000580054 UPK3BQ9BT76 320 aa6.38□□□□□ -1.39
SMARCD2-208ENST00000580054 FAT3Q8TDW7 4589 aa6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 KRTAP29-1A8MX34 341 aaPredicted RBP6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 B4DEV8 164 aa6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 C9JQL5 133 aa6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 LTAP01374 205 aa6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 PRB4P10163 310 aaPredicted RBP6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 CDKN1BP46527 198 aa6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 ERVFC1-1P60608 527 aa6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 OR5I1Q13606 314 aa6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 ESRGQ1W209 222 aa6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 SVBPQ8N300 66 aa6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 C15orf54Q8N8G6 183 aa6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 SGK494Q96LW2 274 aa6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 LINC00479Q96M42 142 aa6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 DERL1Q9BUN8 251 aa6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 NOP10Q9NPE3 64 aaKnown RBP6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 TIMM8BQ9Y5J9 83 aaPredicted RBP6.37□□□□□ -1.39
SMARCD2-208ENST00000580054 TRAV26-1A0A087WT03 109 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 TRAV8-1A0A0A6YYK1 113 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 TRAV21A0A0B4J279 112 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 XKRY2A2RUG3 117 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 FABP5P3A8MUU1 101 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 M0R036 132 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 PPP1R2P9O14990 202 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 SNAPINO95295 136 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 APOC3P02656 99 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 MT-ND4LP03901 98 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 CRISP2P16562 243 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 ADIRFQ15847 76 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 SERTAD4-AS1Q5TG53 156 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 SYT8Q8NBV8 401 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 RNASE8Q8TDE3 154 aaKnown RBP6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 TMEM263Q8WUH6 116 aaKnown RBP6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 C20orf144Q9BQM9 153 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 SDF2L1Q9HCN8 221 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 CARHSP1Q9Y2V2 147 aaKnown RBP6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 MRPS16Q9Y3D3 137 aaKnown RBP6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 TNFRSF18Q9Y5U5 241 aa6.36□□□□□ -1.39
SMARCD2-208ENST00000580054 A0A087WTM6 91 aa6.35□□□□□ -1.39
SMARCD2-208ENST00000580054 A0A0J9YY99 117 aa6.35□□□□□ -1.39
SMARCD2-208ENST00000580054 IGLV2-11P01706 119 aa6.35□□□□□ -1.39
SMARCD2-208ENST00000580054 FAM162BQ5T6X4 162 aa6.35□□□□□ -1.39
SMARCD2-208ENST00000580054 PRR27Q6MZM9 219 aa6.35□□□□□ -1.39
SMARCD2-208ENST00000580054 OCC1Q8TAD7 63 aa6.35□□□□□ -1.39
SMARCD2-208ENST00000580054 Q8TAT8 98 aa6.35□□□□□ -1.39
SMARCD2-208ENST00000580054 PLA2G2DQ9UNK4 145 aa6.35□□□□□ -1.39
SMARCD2-208ENST00000580054 GAGE12BA1L429 117 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 C7orf71A4D174 169 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 EREGO14944 169 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 GAGE7O76087 117 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 GCGP01275 180 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 P01737 135 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 GAGE12FP0CL80 117 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 GAGE12GP0CL81 117 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 GAGE12IP0CL82 117 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 HOXA5P20719 270 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 RNASE4P34096 147 aaKnown RBP6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 RPS20P60866 119 aaKnown RBP6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 RPL23P62829 140 aaKnown RBP6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 C10orf91Q5T1B1 145 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 IBA57Q5T440 356 aaKnown RBP6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 ZNF493Q6ZR52 646 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 COX8CQ7Z4L0 72 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 LINC01551Q86U37 167 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 ANAPC16Q96DE5 110 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 KCNS1Q96KK3 526 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 MLST8Q9BVC4 326 aa6.34□□□□□ -1.39
SMARCD2-208ENST00000580054 H7BYZ3 331 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 J3KRW8 73 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 GATCO43716 136 aaKnown RBP6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 ATP6V1G1O75348 118 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 PFN1P07737 140 aaKnown RBP6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 GCSHP23434 173 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 RPL19P84098 196 aaKnown RBP6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 KIR3DS1Q14943 382 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 RHEBQ15382 184 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 FAM159AQ6UWV7 190 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 FAM231DQ6ZW35 169 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 LINC00612Q8N6U2 182 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 NHLRC2Q8NBF2 726 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 OR10G8Q8NGN5 311 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 FAM19A4Q96LR4 140 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 C8orf49Q96NF6 230 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 CTDSP1Q9GZU7 261 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 OSTCQ9NRP0 149 aa6.33□□□□□ -1.4
SMARCD2-208ENST00000580054 RNF213Q63HN8 5207 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms