RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 WIPF3A6NGB9 483 aa7.86□□□□□ -1.15
MSI2-209ENST00000579483 MED14OSP0DP75 135 aa7.86□□□□□ -1.15
MSI2-209ENST00000579483 DDTP30046 118 aa7.86□□□□□ -1.15
MSI2-209ENST00000579483 HSD52Q0P140 79 aa7.86□□□□□ -1.15
MSI2-209ENST00000579483 ADAMTSL5Q6ZMM2 481 aa7.86□□□□□ -1.15
MSI2-209ENST00000579483 SPANXA1Q9NS26 97 aa7.86□□□□□ -1.15
MSI2-209ENST00000579483 PRO0255Q9UI72 69 aa7.86□□□□□ -1.15
MSI2-209ENST00000579483 LYRM9A8MSI8 78 aa7.86□□□□□ -1.15
MSI2-209ENST00000579483 NDUFAF3Q9BU61 184 aa7.86□□□□□ -1.15
MSI2-209ENST00000579483 TMEM126AQ9H061 195 aa7.86□□□□□ -1.15
MSI2-209ENST00000579483 MAP6D1Q9H9H5 199 aa7.86□□□□□ -1.15
MSI2-209ENST00000579483 ZNF106Q9H2Y7 1883 aaKnown RBP7.86□□□□□ -1.15
MSI2-209ENST00000579483 LINC01006Q8NI28 216 aa7.85□□□□□ -1.15
MSI2-209ENST00000579483 GNRH2O43555 120 aa7.85□□□□□ -1.15
MSI2-209ENST00000579483 SNAI2O43623 268 aa7.85□□□□□ -1.15
MSI2-209ENST00000579483 FANCD2OSQ96PS1 177 aa7.85□□□□□ -1.15
MSI2-209ENST00000579483 LAMTOR3Q9UHA4 124 aa7.85□□□□□ -1.15
MSI2-209ENST00000579483 MRPL51Q4U2R6 128 aaKnown RBP7.85□□□□□ -1.15
MSI2-209ENST00000579483 TTC32Q5I0X7 151 aa7.85□□□□□ -1.15
MSI2-209ENST00000579483 LINC00518Q8N0U6 118 aa7.85□□□□□ -1.15
MSI2-209ENST00000579483 C15orf53Q8NAA6 179 aa7.85□□□□□ -1.15
MSI2-209ENST00000579483 HLA-DMBP28068 263 aa7.85□□□□□ -1.15
MSI2-209ENST00000579483 DEFB125Q8N687 156 aa7.85□□□□□ -1.15
MSI2-209ENST00000579483 ODF3Q96PU9 254 aa7.85□□□□□ -1.15
MSI2-209ENST00000579483 A0A0J9YX75 114 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 VWC2LB2RUY7 222 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 MIFP14174 115 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 DEFB114Q30KQ6 69 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 ZC2HC1BQ5TFG8 222 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 C17orf77Q96MU5 243 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 POLR3KQ9Y2Y1 108 aaPredicted RBP7.84□□□□□ -1.15
MSI2-209ENST00000579483 HIST1H2BKO60814 126 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 HIST1H2BJP06899 126 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 IGLL1P15814 213 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 HIST1H2BOP23527 126 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 HIST1H2BBP33778 126 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 HIST1H2BDP58876 126 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 HIST1H2BCP62807 126 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 HIST2H2BEQ16778 126 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.84□□□□□ -1.15
MSI2-209ENST00000579483 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.84□□□□□ -1.15
MSI2-209ENST00000579483 HIST1H2BHQ93079 126 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 HIST1H2BNQ99877 126 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 HIST1H2BMQ99879 126 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 HIVEP3Q5T1R4 2406 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 DYSFO75923 2080 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 DEFB104AQ8WTQ1 72 aa7.84□□□□□ -1.15
MSI2-209ENST00000579483 IL15RAQ13261 267 aa7.83□□□□□ -1.16
MSI2-209ENST00000579483 Q6ZQT7 251 aa7.83□□□□□ -1.16
MSI2-209ENST00000579483 SMIM27A0A1W2PRY6 76 aa7.83□□□□□ -1.16
MSI2-209ENST00000579483 CTAG1AP78358 180 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 Q0VG73 95 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 FREM1Q5H8C1 2179 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 ORAOV1Q8WV07 137 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 TRBV10-1A0A0K0K1A3 114 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 SYS1-DBNDD2H3BUS1 97 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 ZNF726P1Q15940 193 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 SNHG12Q9BXW3 62 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 PCDH15Q96QU1 1955 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 A0A1B0GWB2 263 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 LY6LH3BQJ8 138 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 CXCL1P09341 107 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 PFN2P35080 140 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 CAMK2N2Q96S95 79 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 CHD8Q9HCK8 2581 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 ESDP10768 282 aa7.82□□□□□ -1.16
MSI2-209ENST00000579483 EGR2P11161 476 aaPredicted RBP7.82□□□□□ -1.16
MSI2-209ENST00000579483 ZNF503Q96F45 646 aa7.81□□□□□ -1.16
MSI2-209ENST00000579483 ZNF702PQ9H963 129 aa7.81□□□□□ -1.16
MSI2-209ENST00000579483 EML6Q6ZMW3 1958 aa7.81□□□□□ -1.16
MSI2-209ENST00000579483 PTPRSQ13332 1948 aa7.81□□□□□ -1.16
MSI2-209ENST00000579483 TRBV7-3A0A075B6L6 115 aa7.81□□□□□ -1.16
MSI2-209ENST00000579483 XCL1P47992 114 aa7.81□□□□□ -1.16
MSI2-209ENST00000579483 AMTNQ6UX39 209 aa7.81□□□□□ -1.16
MSI2-209ENST00000579483 TRAV4A0A0B4J268 109 aa7.81□□□□□ -1.16
MSI2-209ENST00000579483 COX7A2LO14548 114 aa7.81□□□□□ -1.16
MSI2-209ENST00000579483 UNQ9165/PRO28630Q6UXU0 137 aa7.81□□□□□ -1.16
MSI2-209ENST00000579483 CYYR1Q96J86 154 aa7.81□□□□□ -1.16
MSI2-209ENST00000579483 V9GYV3 84 aa7.81□□□□□ -1.16
MSI2-209ENST00000579483 SPCS1Q9Y6A9 102 aa7.81□□□□□ -1.16
MSI2-209ENST00000579483 IGHV3-30P01768 117 aa7.8□□□□□ -1.16
MSI2-209ENST00000579483 IGHV3-33P01772 117 aa7.8□□□□□ -1.16
MSI2-209ENST00000579483 IGHV3-30-3P0DP02 117 aa7.8□□□□□ -1.16
MSI2-209ENST00000579483 IGHV3-30-5P0DP03 117 aa7.8□□□□□ -1.16
MSI2-209ENST00000579483 CCDC140Q96MF4 163 aa7.8□□□□□ -1.16
MSI2-209ENST00000579483 Q8N1Y9 231 aa7.8□□□□□ -1.16
MSI2-209ENST00000579483 TRAV10A0A0B4J240 114 aa7.8□□□□□ -1.16
MSI2-209ENST00000579483 KIR2DL5BA0A0G2JN68 375 aa7.8□□□□□ -1.16
MSI2-209ENST00000579483 KIR2DL5BA0A0G2JPC4 375 aa7.8□□□□□ -1.16
MSI2-209ENST00000579483 KIR2DL5AQ8N109 375 aa7.8□□□□□ -1.16
MSI2-209ENST00000579483 KIR2DL5BQ8NHK3 375 aa7.8□□□□□ -1.16
MSI2-209ENST00000579483 MRPL36Q9P0J6 103 aaKnown RBP7.8□□□□□ -1.16
MSI2-209ENST00000579483 CHD3Q12873 2000 aaKnown RBP7.8□□□□□ -1.16
MSI2-209ENST00000579483 HERV-K104P63124 156 aa7.8□□□□□ -1.16
MSI2-209ENST00000579483 NDUFA12Q9UI09 145 aa7.8□□□□□ -1.16
MSI2-209ENST00000579483 TLN1Q9Y490 2541 aaKnown RBP7.8□□□□□ -1.16
MSI2-209ENST00000579483 K7EQG2 157 aa7.79□□□□□ -1.16
MSI2-209ENST00000579483 PATE2Q6UY27 113 aa7.79□□□□□ -1.16
MSI2-209ENST00000579483 DEFB131BA0A096LNP1 70 aa7.79□□□□□ -1.16
MSI2-209ENST00000579483 TRBV12-3P01733 135 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms