RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 PFN1P07737 140 aaKnown RBP6.22□□□□□ -1.41
CDK5RAP3-211ENST00000578996 IGHV3-30-3P0DP02 117 aa6.22□□□□□ -1.41
CDK5RAP3-211ENST00000578996 IGHV3-30-5P0DP03 117 aa6.22□□□□□ -1.41
CDK5RAP3-211ENST00000578996 NDUFA5Q16718 116 aa6.22□□□□□ -1.41
CDK5RAP3-211ENST00000578996 CFAP126Q5VTH2 177 aa6.22□□□□□ -1.41
CDK5RAP3-211ENST00000578996 DPPA3Q6W0C5 159 aa6.22□□□□□ -1.41
CDK5RAP3-211ENST00000578996 KCNRGQ8N5I3 272 aa6.22□□□□□ -1.41
CDK5RAP3-211ENST00000578996 CYB561D1Q8N8Q1 229 aa6.22□□□□□ -1.41
CDK5RAP3-211ENST00000578996 Q9HAA7 133 aa6.22□□□□□ -1.41
CDK5RAP3-211ENST00000578996 EPDR1Q9UM22 224 aa6.22□□□□□ -1.41
CDK5RAP3-211ENST00000578996 FXYD6-FXYD2A0A087WZ82 144 aa6.21□□□□□ -1.42
CDK5RAP3-211ENST00000578996 TRAV34A0A0B4J273 112 aa6.21□□□□□ -1.42
CDK5RAP3-211ENST00000578996 PGPEP1LA6NFU8 196 aa6.21□□□□□ -1.42
CDK5RAP3-211ENST00000578996 RS1O15537 224 aa6.21□□□□□ -1.42
CDK5RAP3-211ENST00000578996 IFNA7P01567 189 aa6.21□□□□□ -1.42
CDK5RAP3-211ENST00000578996 S100A4P26447 101 aaKnown RBP6.21□□□□□ -1.42
CDK5RAP3-211ENST00000578996 KRTAP10-1P60331 282 aa6.21□□□□□ -1.42
CDK5RAP3-211ENST00000578996 UBE2G2P60604 165 aa6.21□□□□□ -1.42
CDK5RAP3-211ENST00000578996 SERF2P84101 59 aa6.21□□□□□ -1.42
CDK5RAP3-211ENST00000578996 ZNF506Q5JVG8 444 aa6.21□□□□□ -1.42
CDK5RAP3-211ENST00000578996 RPL7L1Q6DKI1 246 aaKnown RBP6.21□□□□□ -1.42
CDK5RAP3-211ENST00000578996 INO80EQ8NBZ0 244 aaPredicted RBP6.21□□□□□ -1.42
CDK5RAP3-211ENST00000578996 LINC00479Q96M42 142 aa6.21□□□□□ -1.42
CDK5RAP3-211ENST00000578996 BOLA1Q9Y3E2 137 aa6.21□□□□□ -1.42
CDK5RAP3-211ENST00000578996 IGLV5-52A0A0A0MRZ9 124 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 BORCS7-ASMTA0A0B4J1R7 106 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 TRBV6-4A0A1B0GX49 114 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 RNF222A6NCQ9 220 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 CIDEAO60543 219 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 IGLV2-11P01706 119 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 MGST1P10620 155 aaKnown RBP6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 RNASE3P12724 160 aaKnown RBP6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 GCSHP23434 173 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 HAMPP81172 84 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 LINC01556Q5JQF7 62 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 SAPCD1Q5SSQ6 148 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 TEX261Q6UWH6 196 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 TMUB2Q71RG4 321 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 SLC51BQ86UW2 128 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 SUN5Q8TC36 379 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 C9orf85Q96MD7 179 aa6.2□□□□□ -1.42
CDK5RAP3-211ENST00000578996 A0A1W2PRE2 83 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 GAGE12JA6NER3 117 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 ARPC5O15511 151 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 SMR3BP02814 79 aaPredicted RBP6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 ASIPP42127 132 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 FGF8P55075 233 aaPredicted RBP6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 XGP55808 180 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 TIRAPP58753 221 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 GAGE1Q13065 139 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 GAGE4Q13068 117 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 GAGE5Q13069 117 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 GAGE13Q4V321 117 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 LELP1Q5T871 98 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 Q5VSD8 79 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 ATP6V0E2Q8NHE4 81 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 FRZBQ92765 325 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 ARL2-SNX15V9GYD0 113 aa6.19□□□□□ -1.42
CDK5RAP3-211ENST00000578996 IGKV3D-20A0A0C4DH25 116 aa6.18□□□□□ -1.42
CDK5RAP3-211ENST00000578996 CTXND1A0A1B0GTU2 59 aa6.18□□□□□ -1.42
CDK5RAP3-211ENST00000578996 IBA57-AS1B1ANH7 110 aa6.18□□□□□ -1.42
CDK5RAP3-211ENST00000578996 B4DEV8 164 aa6.18□□□□□ -1.42
CDK5RAP3-211ENST00000578996 M0R036 132 aa6.18□□□□□ -1.42
CDK5RAP3-211ENST00000578996 PEX7O00628 323 aa6.18□□□□□ -1.42
CDK5RAP3-211ENST00000578996 BCL2L11O43521 198 aa6.18□□□□□ -1.42
CDK5RAP3-211ENST00000578996 INAFM2P0DMQ5 153 aa6.18□□□□□ -1.42
CDK5RAP3-211ENST00000578996 ZNF726P1Q15940 193 aa6.18□□□□□ -1.42
CDK5RAP3-211ENST00000578996 AKR1C8PQ5T2L2 129 aa6.18□□□□□ -1.42
CDK5RAP3-211ENST00000578996 STOML3Q8TAV4 291 aa6.18□□□□□ -1.42
CDK5RAP3-211ENST00000578996 GTSF1LQ9H1H1 148 aa6.18□□□□□ -1.42
CDK5RAP3-211ENST00000578996 PARLQ9H300 379 aa6.18□□□□□ -1.42
CDK5RAP3-211ENST00000578996 KANTRA0A1W2PQU2 76 aa6.17□□□□□ -1.42
CDK5RAP3-211ENST00000578996 FABP5P3A8MUU1 101 aa6.17□□□□□ -1.42
CDK5RAP3-211ENST00000578996 A8MWV9 139 aa6.17□□□□□ -1.42
CDK5RAP3-211ENST00000578996 H3BVH4 76 aa6.17□□□□□ -1.42
CDK5RAP3-211ENST00000578996 EIF5AP63241 154 aaKnown RBP6.17□□□□□ -1.42
CDK5RAP3-211ENST00000578996 FAM74A4Q5TZK3 123 aa6.17□□□□□ -1.42
CDK5RAP3-211ENST00000578996 Q6ZSN1 163 aa6.17□□□□□ -1.42
CDK5RAP3-211ENST00000578996 Q86TA4 180 aa6.17□□□□□ -1.42
CDK5RAP3-211ENST00000578996 Q8N3U1 123 aa6.17□□□□□ -1.42
CDK5RAP3-211ENST00000578996 Q8N814 137 aa6.17□□□□□ -1.42
CDK5RAP3-211ENST00000578996 JPT2Q9H910 190 aa6.17□□□□□ -1.42
CDK5RAP3-211ENST00000578996 TMSB15BA0A087X1C1 80 aa6.16□□□□□ -1.42
CDK5RAP3-211ENST00000578996 GRIFINA4D1Z8 144 aa6.16□□□□□ -1.42
CDK5RAP3-211ENST00000578996 LRCOL1A6NCL2 159 aa6.16□□□□□ -1.42
CDK5RAP3-211ENST00000578996 FAM74A7A6NL05 159 aa6.16□□□□□ -1.42
CDK5RAP3-211ENST00000578996 UBE2G1P62253 170 aa6.16□□□□□ -1.42
CDK5RAP3-211ENST00000578996 SYT8Q8NBV8 401 aa6.16□□□□□ -1.42
CDK5RAP3-211ENST00000578996 NTN5Q8WTR8 489 aaPredicted RBP6.16□□□□□ -1.42
CDK5RAP3-211ENST00000578996 HIST1H2BAQ96A08 127 aa6.16□□□□□ -1.42
CDK5RAP3-211ENST00000578996 PTH2Q96A98 100 aa6.16□□□□□ -1.42
CDK5RAP3-211ENST00000578996 SAMD10Q9BYL1 202 aa6.16□□□□□ -1.42
CDK5RAP3-211ENST00000578996 FAT1Q14517 4588 aa6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 MAP1LC3B2A6NCE7 125 aa6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 LECT2O14960 151 aa6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 SH2D1AO60880 128 aa6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 ARMS2P0C7Q2 107 aa6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 CLLU1Q5K131 121 aa6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 DMRTA1Q5VZB9 504 aa6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 CST9LP1Q5W188 147 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms