RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TAGLN2P37802 199 aaKnown RBP2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 AKR1C3P42330 323 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 NANOS2P60321 138 aaKnown RBP2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 DAZ2Q13117 558 aaKnown RBP2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 RRN3P1Q2M238 152 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 SMUG1Q53HV7 270 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 CENPWQ5EE01 88 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 MUC21Q5SSG8 566 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 SAPCD1Q5SSQ6 148 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 FAM222AQ5U5X8 452 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 ZNF493Q6ZR52 646 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 Q6ZTC4 211 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 Q6ZTI0 123 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 ZNF767PQ75MW2 155 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 EIF4E3Q8N5X7 224 aaKnown RBP2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 NHLRC2Q8NBF2 726 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 MUC7Q8TAX7 377 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 SMIM12Q96EX1 92 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 C16orf74Q96GX8 76 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 PARLQ9H300 379 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 SCRT2Q9NQ03 307 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 GSN-AS1Q9NRJ2 163 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 MED9Q9NWA0 146 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 ZFP30Q9Y2G7 519 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 DNAH11Q96DT5 4516 aa2.65□□□□□ -1.98
SMARCE1-215ENST00000578995 TRAV21A0A0B4J279 112 aa2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 TMEM189A5PLL7 270 aa2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 LYRM9A8MSI8 78 aa2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 IFNA1P01562 189 aa2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 S100A9P06702 114 aaKnown RBP2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 CXCL1P09341 107 aa2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 IGLC6P0CF74 106 aa2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 RPL19P84098 196 aaKnown RBP2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 CASC10Q5T4H9 136 aa2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 UFSP1Q6NVU6 142 aa2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 BAGE2Q86Y30 109 aa2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 OCC1Q8TAD7 63 aa2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 RASL10AQ92737 203 aa2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 PTH2Q96A98 100 aa2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 LINC01587Q99440 93 aa2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 NIPSNAP3BQ9BS92 247 aa2.65□□□□□ -1.99
SMARCE1-215ENST00000578995 PKD1P98161 4303 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 LINC00862A6NCI5 91 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 FABP5P3A8MUU1 101 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 C3orf84H3BNL1 204 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 K7EQM0 130 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 SNAI2O43623 268 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 SPART-AS1P0CW21 52 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 LINC00315P59091 139 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 UBE2G1P62253 170 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 ZNF415Q09FC8 603 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 OR5I1Q13606 314 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 LGALS9BQ3B8N2 356 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 FAM162BQ5T6X4 162 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 CEMP1Q6PRD7 247 aaPredicted RBP2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 FAM231DQ6ZW35 169 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 LINC01551Q86U37 167 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 C11orf45Q8TAV5 145 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 PHLDA1Q8WV24 401 aaPredicted RBP2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 GTSF1Q8WW33 167 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 VSIG2Q96IQ7 327 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 NDFIP1Q9BT67 221 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 CNFNQ9BYD5 112 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 SMDT1Q9H4I9 107 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 SDF2L1Q9HCN8 221 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 NOP10Q9NPE3 64 aaKnown RBP2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 MRPL16Q9NX20 251 aaKnown RBP2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 IL36BQ9NZH7 164 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 APLNQ9ULZ1 77 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 TIMM8BQ9Y5J9 83 aaPredicted RBP2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 LY96Q9Y6Y9 160 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 KIF25-AS1Q9Y6Z4 181 aa2.64□□□□□ -1.99
SMARCE1-215ENST00000578995 DYNC1H1Q14204 4646 aaKnown RBP2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 TRGV11A0A075B6L2 103 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 IGHV4-4A0A075B6R2 117 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 TEX48A0A1B0GUV7 120 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 GRIFINA4D1Z8 144 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 CXorf65A6NEN9 183 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 CBY3A6NI87 242 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 B4DEV8 164 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 H3BVH4 76 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 M0R036 132 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 RS1O15537 224 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 OR5AL1P0C617 328 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 ARMS2P0C7Q2 107 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 LINC00694P0DN24 101 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 GZMBP10144 247 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 HTN1P15515 57 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 CTRLP40313 264 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 GNG4P50150 75 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 EMP1P54849 157 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 RPL23P62829 140 aaKnown RBP2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 PIK3CD-AS1Q5SR53 167 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 C10orf91Q5T1B1 145 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 ZFAND6Q6FIF0 208 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 FAM159AQ6UWV7 190 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 OR10AG1Q8NH19 301 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 ISOC2Q96AB3 205 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 ZNF479Q96JC4 524 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 KCNS1Q96KK3 526 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms