RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 SERF1AO75920 110 aa12.51□□□□□ -0.41
SREBF1-218ENST00000578469 AMBPP02760 352 aa12.51□□□□□ -0.41
SREBF1-218ENST00000578469 ODF3L2Q3SX64 289 aa12.51□□□□□ -0.41
SREBF1-218ENST00000578469 TDRG1Q3Y452 100 aa12.51□□□□□ -0.41
SREBF1-218ENST00000578469 STHQ8IWL8 128 aa12.51□□□□□ -0.41
SREBF1-218ENST00000578469 OR10AG1Q8NH19 301 aa12.51□□□□□ -0.41
SREBF1-218ENST00000578469 HIST1H2BLQ99880 126 aa12.51□□□□□ -0.41
SREBF1-218ENST00000578469 TP53TG3Q9ULZ0 132 aa12.51□□□□□ -0.41
SREBF1-218ENST00000578469 PHLDA3Q9Y5J5 127 aa12.51□□□□□ -0.41
SREBF1-218ENST00000578469 IGHV1OR15-1A0A075B7D0 117 aa12.5□□□□□ -0.41
SREBF1-218ENST00000578469 GNRH2O43555 120 aa12.5□□□□□ -0.41
SREBF1-218ENST00000578469 CD7P09564 240 aa12.5□□□□□ -0.41
SREBF1-218ENST00000578469 ZNF124Q15973 351 aa12.5□□□□□ -0.41
SREBF1-218ENST00000578469 AMN1Q8IY45 258 aa12.5□□□□□ -0.41
SREBF1-218ENST00000578469 OR10D4PQ8NGN7 298 aa12.5□□□□□ -0.41
SREBF1-218ENST00000578469 FAM110AQ9BQ89 295 aa12.5□□□□□ -0.41
SREBF1-218ENST00000578469 INSL3P51460 131 aa12.49□□□□□ -0.41
SREBF1-218ENST00000578469 FXYD7P58549 80 aa12.49□□□□□ -0.41
SREBF1-218ENST00000578469 DMRTA1Q5VZB9 504 aa12.49□□□□□ -0.41
SREBF1-218ENST00000578469 PACRGQ96M98 296 aaPredicted RBP12.49□□□□□ -0.41
SREBF1-218ENST00000578469 SCRT2Q9NQ03 307 aa12.49□□□□□ -0.41
SREBF1-218ENST00000578469 MSRB1Q9NZV6 116 aa12.49□□□□□ -0.41
SREBF1-218ENST00000578469 TRGV11A0A075B6L2 103 aa12.48□□□□□ -0.41
SREBF1-218ENST00000578469 RBMY1BA6NDE4 496 aaKnown RBP12.48□□□□□ -0.41
SREBF1-218ENST00000578469 RBMY1EA6NEQ0 496 aaKnown RBP12.48□□□□□ -0.41
SREBF1-218ENST00000578469 RBMY1DP0C7P1 496 aaKnown RBP12.48□□□□□ -0.41
SREBF1-218ENST00000578469 IQCJQ1A5X6 159 aa12.48□□□□□ -0.41
SREBF1-218ENST00000578469 BEAN1Q3B7T3 259 aa12.48□□□□□ -0.41
SREBF1-218ENST00000578469 MRPL51Q4U2R6 128 aaKnown RBP12.48□□□□□ -0.41
SREBF1-218ENST00000578469 C9orf66Q5T8R8 295 aa12.48□□□□□ -0.41
SREBF1-218ENST00000578469 ORMDL3Q8N138 153 aa12.48□□□□□ -0.41
SREBF1-218ENST00000578469 C20orf144Q9BQM9 153 aa12.48□□□□□ -0.41
SREBF1-218ENST00000578469 SAMD10Q9BYL1 202 aa12.48□□□□□ -0.41
SREBF1-218ENST00000578469 NUPR1O60356 82 aa12.47□□□□□ -0.41
SREBF1-218ENST00000578469 PPBPP02775 128 aa12.47□□□□□ -0.41
SREBF1-218ENST00000578469 SMIM6P0DI80 62 aa12.47□□□□□ -0.41
SREBF1-218ENST00000578469 RNASE3P12724 160 aaKnown RBP12.47□□□□□ -0.41
SREBF1-218ENST00000578469 CKS2P33552 79 aa12.47□□□□□ -0.41
SREBF1-218ENST00000578469 U3KQK5 164 aa12.47□□□□□ -0.41
SREBF1-218ENST00000578469 M0R381 172 aa12.46□□□□□ -0.41
SREBF1-218ENST00000578469 RAB4AP20338 218 aa12.46□□□□□ -0.41
SREBF1-218ENST00000578469 LINC00310P59036 64 aa12.46□□□□□ -0.41
SREBF1-218ENST00000578469 NUTF2P61970 127 aaKnown RBP12.46□□□□□ -0.41
SREBF1-218ENST00000578469 LINC00518Q8N0U6 118 aa12.46□□□□□ -0.41
SREBF1-218ENST00000578469 PRELID3AQ96N28 172 aa12.46□□□□□ -0.41
SREBF1-218ENST00000578469 NBEAL2Q6ZNJ1 2754 aa12.45□□□□□ -0.42
SREBF1-218ENST00000578469 IGHV3-16A0A0C4DH30 117 aa12.45□□□□□ -0.42
SREBF1-218ENST00000578469 D6R8Y8 96 aa12.45□□□□□ -0.42
SREBF1-218ENST00000578469 CRXO43186 299 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-218ENST00000578469 HSBP1O75506 76 aa12.45□□□□□ -0.42
SREBF1-218ENST00000578469 INSP01308 110 aa12.45□□□□□ -0.42
SREBF1-218ENST00000578469 RNASEKQ6P5S7 137 aaKnown RBP12.45□□□□□ -0.42
SREBF1-218ENST00000578469 TRPT1Q86TN4 253 aaKnown RBP12.45□□□□□ -0.42
SREBF1-218ENST00000578469 NIT1Q86X76 327 aa12.45□□□□□ -0.42
SREBF1-218ENST00000578469 SYT8Q8NBV8 401 aa12.45□□□□□ -0.42
SREBF1-218ENST00000578469 CHCHD1Q96BP2 118 aaKnown RBP12.45□□□□□ -0.42
SREBF1-218ENST00000578469 RCHY1Q96PM5 261 aa12.45□□□□□ -0.42
SREBF1-218ENST00000578469 MCRIP2Q9BUT9 160 aaKnown RBP12.45□□□□□ -0.42
SREBF1-218ENST00000578469 CBY3A6NI87 242 aa12.44□□□□□ -0.42
SREBF1-218ENST00000578469 EVI2AP22794 236 aa12.44□□□□□ -0.42
SREBF1-218ENST00000578469 Q8N1Y9 231 aa12.44□□□□□ -0.42
SREBF1-218ENST00000578469 RNF185Q96GF1 192 aa12.44□□□□□ -0.42
SREBF1-218ENST00000578469 AP1S3Q96PC3 154 aa12.44□□□□□ -0.42
SREBF1-218ENST00000578469 LAMTOR2Q9Y2Q5 125 aa12.44□□□□□ -0.42
SREBF1-218ENST00000578469 G3V4G9 280 aa12.43□□□□□ -0.42
SREBF1-218ENST00000578469 NXPH4O95158 308 aa12.43□□□□□ -0.42
SREBF1-218ENST00000578469 AMTP48728 403 aa12.43□□□□□ -0.42
SREBF1-218ENST00000578469 C9orf85Q96MD7 179 aa12.43□□□□□ -0.42
SREBF1-218ENST00000578469 LINC00467Q9BRT7 94 aa12.43□□□□□ -0.42
SREBF1-218ENST00000578469 LINC00614P0C842 121 aa12.42□□□□□ -0.42
SREBF1-218ENST00000578469 PMCHP20382 165 aa12.42□□□□□ -0.42
SREBF1-218ENST00000578469 PRSS3P2Q8NHM4 247 aa12.42□□□□□ -0.42
SREBF1-218ENST00000578469 LINC01587Q99440 93 aa12.42□□□□□ -0.42
SREBF1-218ENST00000578469 C12orf57Q99622 126 aa12.42□□□□□ -0.42
SREBF1-218ENST00000578469 DPH3P1Q9H4G8 78 aa12.42□□□□□ -0.42
SREBF1-218ENST00000578469 AGRNO00468 2067 aa12.41□□□□□ -0.42
SREBF1-218ENST00000578469 SORL1Q92673 2214 aa12.41□□□□□ -0.42
SREBF1-218ENST00000578469 RBMY1A1P0DJD3 496 aaKnown RBP12.41□□□□□ -0.42
SREBF1-218ENST00000578469 RBMY1CP0DJD4 496 aa12.41□□□□□ -0.42
SREBF1-218ENST00000578469 SMIM17P0DL12 118 aa12.41□□□□□ -0.42
SREBF1-218ENST00000578469 RBMY1FQ15415 496 aaKnown RBP12.41□□□□□ -0.42
SREBF1-218ENST00000578469 KPRPQ5T749 579 aaPredicted RBP12.41□□□□□ -0.42
SREBF1-218ENST00000578469 FA2HQ7L5A8 372 aa12.41□□□□□ -0.42
SREBF1-218ENST00000578469 MRAP2Q96G30 205 aa12.41□□□□□ -0.42
SREBF1-218ENST00000578469 SPRY2O43597 315 aa12.4□□□□□ -0.42
SREBF1-218ENST00000578469 ZNF415Q09FC8 603 aa12.4□□□□□ -0.42
SREBF1-218ENST00000578469 SAMD5Q5TGI4 173 aa12.4□□□□□ -0.42
SREBF1-218ENST00000578469 MORN3Q6PF18 240 aaPredicted RBP12.4□□□□□ -0.42
SREBF1-218ENST00000578469 GTSCR1Q86UQ5 136 aa12.4□□□□□ -0.42
SREBF1-218ENST00000578469 MRAPQ8TCY5 172 aa12.4□□□□□ -0.42
SREBF1-218ENST00000578469 MAP1LC3AQ9H492 121 aa12.4□□□□□ -0.42
SREBF1-218ENST00000578469 C19orf73Q9NVV2 129 aa12.4□□□□□ -0.42
SREBF1-218ENST00000578469 MDFICQ9P1T7 246 aa12.4□□□□□ -0.42
SREBF1-218ENST00000578469 XCL2Q9UBD3 114 aa12.4□□□□□ -0.42
SREBF1-218ENST00000578469 SMKR1H3BMG3 65 aa12.39□□□□□ -0.43
SREBF1-218ENST00000578469 NCR2O95944 276 aa12.39□□□□□ -0.43
SREBF1-218ENST00000578469 HTN1P15515 57 aa12.39□□□□□ -0.43
SREBF1-218ENST00000578469 TMEM208Q9BTX3 173 aa12.39□□□□□ -0.43
SREBF1-218ENST00000578469 NPYP01303 97 aa12.38□□□□□ -0.43
SREBF1-218ENST00000578469 PRB2P02812 416 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms