RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 HLA-DRB4X5D2U9 266 aa20.53■□□□□ 0.88
LIMD2-203ENST00000578067 OR4C46A6NHA9 309 aa20.52■□□□□ 0.88
LIMD2-203ENST00000578067 CD7P09564 240 aa20.52■□□□□ 0.88
LIMD2-203ENST00000578067 LINC00173Q6ZV60 143 aa20.52■□□□□ 0.88
LIMD2-203ENST00000578067 SPAG8Q99932 426 aaPredicted RBP20.52■□□□□ 0.88
LIMD2-203ENST00000578067 HIVEP2P31629 2446 aa20.52■□□□□ 0.88
LIMD2-203ENST00000578067 TRAV25A0A0B4J276 109 aa20.51■□□□□ 0.87
LIMD2-203ENST00000578067 A8MTW9 85 aa20.51■□□□□ 0.87
LIMD2-203ENST00000578067 DDTP30046 118 aa20.51■□□□□ 0.87
LIMD2-203ENST00000578067 MAP6D1Q9H9H5 199 aa20.51■□□□□ 0.87
LIMD2-203ENST00000578067 MTORP42345 2549 aa20.51■□□□□ 0.87
LIMD2-203ENST00000578067 GATA1P15976 413 aaPredicted RBP20.51■□□□□ 0.87
LIMD2-203ENST00000578067 PROK1P58294 105 aa20.51■□□□□ 0.87
LIMD2-203ENST00000578067 VAMP8Q9BV40 100 aa20.51■□□□□ 0.87
LIMD2-203ENST00000578067 HSPB8Q9UJY1 196 aa20.51■□□□□ 0.87
LIMD2-203ENST00000578067 NF1P21359 2839 aa20.5■□□□□ 0.87
LIMD2-203ENST00000578067 H3BMM0 161 aa20.5■□□□□ 0.87
LIMD2-203ENST00000578067 KIR2DL5BA0A0G2JN68 375 aa20.49■□□□□ 0.87
LIMD2-203ENST00000578067 KIR2DL5BA0A0G2JPC4 375 aa20.49■□□□□ 0.87
LIMD2-203ENST00000578067 NXPH4O95158 308 aa20.49■□□□□ 0.87
LIMD2-203ENST00000578067 KIR2DL5AQ8N109 375 aa20.49■□□□□ 0.87
LIMD2-203ENST00000578067 OR2K2Q8NGT1 345 aa20.49■□□□□ 0.87
LIMD2-203ENST00000578067 MRAP2Q96G30 205 aa20.49■□□□□ 0.87
LIMD2-203ENST00000578067 DPH3P1Q9H4G8 78 aa20.49■□□□□ 0.87
LIMD2-203ENST00000578067 ZNF256Q9Y2P7 627 aaPredicted RBP20.49■□□□□ 0.87
LIMD2-203ENST00000578067 CUBNO60494 3623 aa20.49■□□□□ 0.87
LIMD2-203ENST00000578067 IGHV1OR15-1A0A075B7D0 117 aa20.48■□□□□ 0.87
LIMD2-203ENST00000578067 TRAV26-2A0A0B4J265 109 aa20.48■□□□□ 0.87
LIMD2-203ENST00000578067 CRXO43186 299 aaPredicted RBP20.48■□□□□ 0.87
LIMD2-203ENST00000578067 NXT2Q9NPJ8 142 aaKnown RBP20.48■□□□□ 0.87
LIMD2-203ENST00000578067 SYS1-DBNDD2H3BUS1 97 aa20.47■□□□□ 0.87
LIMD2-203ENST00000578067 ZNF124Q15973 351 aa20.47■□□□□ 0.87
LIMD2-203ENST00000578067 C14orf178Q8N769 122 aaPredicted RBP20.47■□□□□ 0.87
LIMD2-203ENST00000578067 MAP1LC3CQ9BXW4 147 aa20.47■□□□□ 0.87
LIMD2-203ENST00000578067 PAM16Q9Y3D7 125 aa20.47■□□□□ 0.87
LIMD2-203ENST00000578067 A0A096LNJ9 63 aa20.46■□□□□ 0.87
LIMD2-203ENST00000578067 INAFM1C9JVW0 142 aa20.46■□□□□ 0.87
LIMD2-203ENST00000578067 NRACQ8N912 160 aa20.46■□□□□ 0.87
LIMD2-203ENST00000578067 AP1S3Q96PC3 154 aa20.46■□□□□ 0.87
LIMD2-203ENST00000578067 IGHV3-16A0A0C4DH30 117 aa20.46■□□□□ 0.87
LIMD2-203ENST00000578067 LINC01546A6NGU7 62 aa20.46■□□□□ 0.87
LIMD2-203ENST00000578067 CTAG1AP78358 180 aa20.46■□□□□ 0.87
LIMD2-203ENST00000578067 AGRNO00468 2067 aa20.45■□□□□ 0.86
LIMD2-203ENST00000578067 FXYD7P58549 80 aa20.45■□□□□ 0.86
LIMD2-203ENST00000578067 SPATA12Q7Z6I5 190 aa20.45■□□□□ 0.86
LIMD2-203ENST00000578067 PRSS47A8MTI9 375 aa20.44■□□□□ 0.86
LIMD2-203ENST00000578067 Q8N1Y9 231 aa20.44■□□□□ 0.86
LIMD2-203ENST00000578067 C20orf144Q9BQM9 153 aa20.44■□□□□ 0.86
LIMD2-203ENST00000578067 ZNF747Q9BV97 191 aa20.44■□□□□ 0.86
LIMD2-203ENST00000578067 ADARB2-AS1A8MUL3 147 aa20.44■□□□□ 0.86
LIMD2-203ENST00000578067 C9orf85Q96MD7 179 aa20.44■□□□□ 0.86
LIMD2-203ENST00000578067 OTOGQ6ZRI0 2925 aa20.43■□□□□ 0.86
LIMD2-203ENST00000578067 RBMY1BA6NDE4 496 aaKnown RBP20.43■□□□□ 0.86
LIMD2-203ENST00000578067 RBMY1EA6NEQ0 496 aaKnown RBP20.43■□□□□ 0.86
LIMD2-203ENST00000578067 RBMY1DP0C7P1 496 aaKnown RBP20.43■□□□□ 0.86
LIMD2-203ENST00000578067 DEFB125Q8N687 156 aa20.43■□□□□ 0.86
LIMD2-203ENST00000578067 HBDP02042 147 aa20.43■□□□□ 0.86
LIMD2-203ENST00000578067 Q8N8P6 123 aa20.43■□□□□ 0.86
LIMD2-203ENST00000578067 MDFICQ9P1T7 246 aa20.43■□□□□ 0.86
LIMD2-203ENST00000578067 SORL1Q92673 2214 aa20.42■□□□□ 0.86
LIMD2-203ENST00000578067 DEFA6Q01524 100 aa20.42■□□□□ 0.86
LIMD2-203ENST00000578067 PET117Q6UWS5 81 aa20.42■□□□□ 0.86
LIMD2-203ENST00000578067 NOTCH2Q04721 2471 aa20.41■□□□□ 0.86
LIMD2-203ENST00000578067 FOSL1P15407 271 aa20.41■□□□□ 0.86
LIMD2-203ENST00000578067 NSUN5P1Q3KNT7 163 aa20.41■□□□□ 0.86
LIMD2-203ENST00000578067 C20orf202A1L168 122 aa20.41■□□□□ 0.86
LIMD2-203ENST00000578067 ATOH7Q8N100 152 aa20.41■□□□□ 0.86
LIMD2-203ENST00000578067 IGLV2-18A0A075B6J9 118 aa20.4■□□□□ 0.86
LIMD2-203ENST00000578067 MGPP08493 103 aa20.4■□□□□ 0.86
LIMD2-203ENST00000578067 RBMY1A1P0DJD3 496 aaKnown RBP20.4■□□□□ 0.86
LIMD2-203ENST00000578067 RBMY1CP0DJD4 496 aa20.4■□□□□ 0.86
LIMD2-203ENST00000578067 RBMY1FQ15415 496 aaKnown RBP20.4■□□□□ 0.86
LIMD2-203ENST00000578067 ODF3L2Q3SX64 289 aa20.39■□□□□ 0.86
LIMD2-203ENST00000578067 KIF25-AS1Q9Y6Z4 181 aa20.39■□□□□ 0.86
LIMD2-203ENST00000578067 TRGV11A0A075B6L2 103 aa20.39■□□□□ 0.85
LIMD2-203ENST00000578067 POM121L12Q8N7R1 296 aa20.39■□□□□ 0.85
LIMD2-203ENST00000578067 SMIM17P0DL12 118 aa20.38■□□□□ 0.85
LIMD2-203ENST00000578067 SPATA45Q537H7 98 aa20.38■□□□□ 0.85
LIMD2-203ENST00000578067 MUC4Q99102 2169 aa20.38■□□□□ 0.85
LIMD2-203ENST00000578067 SAP30O75446 220 aa20.37■□□□□ 0.85
LIMD2-203ENST00000578067 NDUFAF3Q9BU61 184 aa20.37■□□□□ 0.85
LIMD2-203ENST00000578067 SYT8Q8NBV8 401 aa20.37■□□□□ 0.85
LIMD2-203ENST00000578067 RASL10AQ92737 203 aa20.37■□□□□ 0.85
LIMD2-203ENST00000578067 CLUHP3Q96NS8 147 aa20.37■□□□□ 0.85
LIMD2-203ENST00000578067 CBY3A6NI87 242 aa20.36■□□□□ 0.85
LIMD2-203ENST00000578067 LINC00315P59091 139 aa20.36■□□□□ 0.85
LIMD2-203ENST00000578067 KRTAP10-3P60369 221 aa20.36■□□□□ 0.85
LIMD2-203ENST00000578067 FCER1GP30273 86 aa20.36■□□□□ 0.85
LIMD2-203ENST00000578067 ZNF705AQ6ZN79 300 aaPredicted RBP20.36■□□□□ 0.85
LIMD2-203ENST00000578067 NDUFA11Q86Y39 141 aa20.36■□□□□ 0.85
LIMD2-203ENST00000578067 TRAV9-2A0A087WT02 112 aa20.35■□□□□ 0.85
LIMD2-203ENST00000578067 H0Y8G0 127 aa20.35■□□□□ 0.85
LIMD2-203ENST00000578067 C14orf144Q96I85 54 aa20.35■□□□□ 0.85
LIMD2-203ENST00000578067 JPT2Q9H910 190 aa20.35■□□□□ 0.85
LIMD2-203ENST00000578067 C20orf78Q9BR46 151 aa20.34■□□□□ 0.85
LIMD2-203ENST00000578067 OR11H12B2RN74 326 aa20.34■□□□□ 0.85
LIMD2-203ENST00000578067 LINC01545Q5VT33 79 aa20.34■□□□□ 0.85
LIMD2-203ENST00000578067 MAJINQ3KP22 176 aa20.33■□□□□ 0.85
LIMD2-203ENST00000578067 PPP1R17O96001 155 aa20.32■□□□□ 0.84
LIMD2-203ENST00000578067 MIEN1Q9BRT3 115 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms