RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 SPATA8Q6RVD6 105 aa0.59□□□□□ -2.31
CDC27-219ENST00000576484 CDK12Q9NYV4 1490 aaPredicted RBP0.59□□□□□ -2.32
CDC27-219ENST00000576484 CPDO75976 1380 aa0.58□□□□□ -2.32
CDC27-219ENST00000576484 ATG2AQ2TAZ0 1938 aa0.58□□□□□ -2.32
CDC27-219ENST00000576484 BLMP54132 1417 aaPredicted RBP0.58□□□□□ -2.32
CDC27-219ENST00000576484 TEX49A0A1B0GTD5 131 aa0.58□□□□□ -2.32
CDC27-219ENST00000576484 NCR2O95944 276 aa0.58□□□□□ -2.32
CDC27-219ENST00000576484 IGLC6P0CF74 106 aa0.58□□□□□ -2.32
CDC27-219ENST00000576484 KLKP1Q107X0 134 aa0.58□□□□□ -2.32
CDC27-219ENST00000576484 ZNF56Q15929 161 aa0.58□□□□□ -2.32
CDC27-219ENST00000576484 C6orf52Q5T4I8 152 aa0.58□□□□□ -2.32
CDC27-219ENST00000576484 NDUFA11Q86Y39 141 aa0.58□□□□□ -2.32
CDC27-219ENST00000576484 CEP152O94986 1710 aa0.58□□□□□ -2.32
CDC27-219ENST00000576484 J3QLW9 94 aa0.57□□□□□ -2.32
CDC27-219ENST00000576484 J3QR89 54 aa0.57□□□□□ -2.32
CDC27-219ENST00000576484 APOC1P02654 83 aa0.57□□□□□ -2.32
CDC27-219ENST00000576484 RPL37P61927 97 aaKnown RBP0.57□□□□□ -2.32
CDC27-219ENST00000576484 SMIM21Q3B7S5 101 aa0.57□□□□□ -2.32
CDC27-219ENST00000576484 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
CDC27-219ENST00000576484 SMIM3Q9BZL3 60 aa0.57□□□□□ -2.32
CDC27-219ENST00000576484 SAR1AQ9NR31 198 aa0.57□□□□□ -2.32
CDC27-219ENST00000576484 SYNJ1O43426 1573 aa0.57□□□□□ -2.32
CDC27-219ENST00000576484 CCDC179H3BU77 68 aa0.56□□□□□ -2.32
CDC27-219ENST00000576484 M0R2Z0 102 aa0.56□□□□□ -2.32
CDC27-219ENST00000576484 FXYD1O00168 92 aa0.56□□□□□ -2.32
CDC27-219ENST00000576484 LY6G6CO95867 125 aa0.56□□□□□ -2.32
CDC27-219ENST00000576484 SMCO1Q147U7 214 aa0.56□□□□□ -2.32
CDC27-219ENST00000576484 TMEM14BQ9NUH8 114 aa0.56□□□□□ -2.32
CDC27-219ENST00000576484 COPZ2Q9P299 210 aa0.56□□□□□ -2.32
CDC27-219ENST00000576484 MEGF8Q7Z7M0 2845 aa0.56□□□□□ -2.32
CDC27-219ENST00000576484 ABCA4P78363 2273 aa0.55□□□□□ -2.32
CDC27-219ENST00000576484 PRG4Q92954 1404 aaPredicted RBP0.55□□□□□ -2.32
CDC27-219ENST00000576484 DLEC1Q9Y238 1755 aa0.55□□□□□ -2.32
CDC27-219ENST00000576484 FAM236AA0A1B0GUQ0 79 aa0.55□□□□□ -2.32
CDC27-219ENST00000576484 FAM236BA0A1B0GV22 79 aa0.55□□□□□ -2.32
CDC27-219ENST00000576484 LINC00694P0DN24 101 aa0.55□□□□□ -2.32
CDC27-219ENST00000576484 SLC25A6P12236 298 aa0.55□□□□□ -2.32
CDC27-219ENST00000576484 CTAGE3PQ8IX95 158 aa0.55□□□□□ -2.32
CDC27-219ENST00000576484 ERG28Q9UKR5 140 aa0.55□□□□□ -2.32
CDC27-219ENST00000576484 ERCC6Q03468 1493 aa0.54□□□□□ -2.32
CDC27-219ENST00000576484 MUC5ACP98088 5654 aa0.54□□□□□ -2.32
CDC27-219ENST00000576484 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
CDC27-219ENST00000576484 A0A096LNT2 108 aa0.54□□□□□ -2.32
CDC27-219ENST00000576484 ESPL1Q14674 2120 aa0.54□□□□□ -2.32
CDC27-219ENST00000576484 OR2T2Q6IF00 324 aa0.54□□□□□ -2.32
CDC27-219ENST00000576484 PPP1R1CQ8WVI7 109 aa0.54□□□□□ -2.32
CDC27-219ENST00000576484 FAM103A1Q9BTL3 118 aaKnown RBP0.54□□□□□ -2.32
CDC27-219ENST00000576484 BDP1A6H8Y1 2624 aa0.54□□□□□ -2.32
CDC27-219ENST00000576484 NAV3Q8IVL0 2385 aa0.54□□□□□ -2.32
CDC27-219ENST00000576484 RREB1Q92766 1687 aa0.53□□□□□ -2.32
CDC27-219ENST00000576484 CASZ1Q86V15 1759 aa0.53□□□□□ -2.32
CDC27-219ENST00000576484 AFDNP55196 1824 aaKnown RBP0.53□□□□□ -2.32
CDC27-219ENST00000576484 CDK5RAP2Q96SN8 1893 aa0.53□□□□□ -2.32
CDC27-219ENST00000576484 TRAV12-2A0A075B6T6 113 aa0.53□□□□□ -2.32
CDC27-219ENST00000576484 TFF1P04155 84 aa0.53□□□□□ -2.32
CDC27-219ENST00000576484 PYYP10082 97 aa0.53□□□□□ -2.32
CDC27-219ENST00000576484 SPINK7P58062 85 aa0.53□□□□□ -2.32
CDC27-219ENST00000576484 VSTM2AQ8TAG5 236 aa0.53□□□□□ -2.32
CDC27-219ENST00000576484 TMEM141Q96I45 108 aa0.53□□□□□ -2.32
CDC27-219ENST00000576484 COA4Q9NYJ1 87 aa0.53□□□□□ -2.32
CDC27-219ENST00000576484 PTPRMP28827 1452 aa0.53□□□□□ -2.33
CDC27-219ENST00000576484 PLXNA2O75051 1894 aa0.52□□□□□ -2.33
CDC27-219ENST00000576484 FRAS1Q86XX4 4008 aa0.52□□□□□ -2.33
CDC27-219ENST00000576484 COX4I1P13073 169 aa0.52□□□□□ -2.33
CDC27-219ENST00000576484 LINC01545Q5VT33 79 aa0.52□□□□□ -2.33
CDC27-219ENST00000576484 TSTD1Q8NFU3 115 aa0.52□□□□□ -2.33
CDC27-219ENST00000576484 IFI27L1Q96BM0 104 aa0.52□□□□□ -2.33
CDC27-219ENST00000576484 BET1LQ9NYM9 111 aa0.52□□□□□ -2.33
CDC27-219ENST00000576484 PAIP2BQ9ULR5 123 aaKnown RBP0.52□□□□□ -2.33
CDC27-219ENST00000576484 BCORL1Q5H9F3 1711 aa0.52□□□□□ -2.33
CDC27-219ENST00000576484 TCRBV3S1A0A5B6 114 aa0.51□□□□□ -2.33
CDC27-219ENST00000576484 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
CDC27-219ENST00000576484 K7ERU9 68 aa0.51□□□□□ -2.33
CDC27-219ENST00000576484 NPFFO15130 113 aa0.51□□□□□ -2.33
CDC27-219ENST00000576484 PITX3O75364 302 aa0.51□□□□□ -2.33
CDC27-219ENST00000576484 EMX2Q04743 252 aa0.51□□□□□ -2.33
CDC27-219ENST00000576484 JMJD1CQ15652 2540 aa0.51□□□□□ -2.33
CDC27-219ENST00000576484 MIC13Q5XKP0 118 aa0.51□□□□□ -2.33
CDC27-219ENST00000576484 PFDN5Q99471 154 aa0.51□□□□□ -2.33
CDC27-219ENST00000576484 PLAC8Q9NZF1 115 aa0.51□□□□□ -2.33
CDC27-219ENST00000576484 ABCA1O95477 2261 aa0.5□□□□□ -2.33
CDC27-219ENST00000576484 KIAA0100Q14667 2235 aaKnown RBP0.5□□□□□ -2.33
CDC27-219ENST00000576484 LOC285556D6RIA3 1793 aa0.5□□□□□ -2.33
CDC27-219ENST00000576484 ADGRB1O14514 1584 aa0.5□□□□□ -2.33
CDC27-219ENST00000576484 MCRIP1C9JLW8 97 aa0.5□□□□□ -2.33
CDC27-219ENST00000576484 ZNF670-ZNF695F2Z2N8 137 aa0.5□□□□□ -2.33
CDC27-219ENST00000576484 M0R129 80 aa0.5□□□□□ -2.33
CDC27-219ENST00000576484 ELOF1P60002 83 aaKnown RBP0.5□□□□□ -2.33
CDC27-219ENST00000576484 S100A12P80511 92 aa0.5□□□□□ -2.33
CDC27-219ENST00000576484 SPCS2Q15005 226 aa0.5□□□□□ -2.33
CDC27-219ENST00000576484 SCIMPQ6UWF3 145 aa0.5□□□□□ -2.33
CDC27-219ENST00000576484 CYP2G1PQ6ZSU1 146 aa0.5□□□□□ -2.33
CDC27-219ENST00000576484 TSKUQ8WUA8 353 aa0.5□□□□□ -2.33
CDC27-219ENST00000576484 DSCR8Q96T75 97 aa0.5□□□□□ -2.33
CDC27-219ENST00000576484 NDUFA12Q9UI09 145 aa0.5□□□□□ -2.33
CDC27-219ENST00000576484 USP24Q9UPU5 2620 aa0.5□□□□□ -2.33
CDC27-219ENST00000576484 ZNF142P52746 1687 aaPredicted RBP0.49□□□□□ -2.33
CDC27-219ENST00000576484 RPS25P62851 125 aaKnown RBP0.49□□□□□ -2.33
CDC27-219ENST00000576484 SPANXN1Q5VSR9 72 aa0.49□□□□□ -2.33
CDC27-219ENST00000576484 Q6ZUT4 128 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms