RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 PIFOQ8TCI5 191 aa11.14□□□□□ -0.63
SCARF1-209ENST00000576012 IGFL2Q6UWQ7 119 aa11.13□□□□□ -0.63
SCARF1-209ENST00000576012 SMIM2Q9BVW6 85 aa11.13□□□□□ -0.63
SCARF1-209ENST00000576012 CENPEQ02224 2701 aa11.13□□□□□ -0.63
SCARF1-209ENST00000576012 G3V318 75 aa11.13□□□□□ -0.63
SCARF1-209ENST00000576012 PRR9Q5T870 116 aa11.13□□□□□ -0.63
SCARF1-209ENST00000576012 DUSP14O95147 198 aaKnown RBP11.13□□□□□ -0.63
SCARF1-209ENST00000576012 TCTEX1D4Q5JR98 221 aa11.13□□□□□ -0.63
SCARF1-209ENST00000576012 TRPT1Q86TN4 253 aaKnown RBP11.13□□□□□ -0.63
SCARF1-209ENST00000576012 IGHV7-4-1A0A0J9YVY3 117 aa11.12□□□□□ -0.63
SCARF1-209ENST00000576012 CRIP2P52943 208 aaPredicted RBP11.12□□□□□ -0.63
SCARF1-209ENST00000576012 LINC01559Q495D7 138 aa11.12□□□□□ -0.63
SCARF1-209ENST00000576012 BAALCQ8WXS3 180 aa11.12□□□□□ -0.63
SCARF1-209ENST00000576012 RASL10AQ92737 203 aa11.12□□□□□ -0.63
SCARF1-209ENST00000576012 TRAV8-2A0A0B4J237 113 aa11.11□□□□□ -0.63
SCARF1-209ENST00000576012 SUMO2P61956 95 aaKnown RBP11.11□□□□□ -0.63
SCARF1-209ENST00000576012 RPL39P62891 51 aaKnown RBP11.11□□□□□ -0.63
SCARF1-209ENST00000576012 TAL2Q16559 108 aa11.11□□□□□ -0.63
SCARF1-209ENST00000576012 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.11□□□□□ -0.63
SCARF1-209ENST00000576012 ANKRD29Q8N6D5 301 aa11.11□□□□□ -0.63
SCARF1-209ENST00000576012 F6UB75 175 aa11.11□□□□□ -0.63
SCARF1-209ENST00000576012 C16orf92Q96LL3 132 aa11.11□□□□□ -0.63
SCARF1-209ENST00000576012 KAAG1Q9UBP8 84 aa11.11□□□□□ -0.63
SCARF1-209ENST00000576012 MSRB2Q9Y3D2 182 aa11.11□□□□□ -0.63
SCARF1-209ENST00000576012 C9JAW5 83 aa11.11□□□□□ -0.63
SCARF1-209ENST00000576012 PHLDA3Q9Y5J5 127 aa11.11□□□□□ -0.63
SCARF1-209ENST00000576012 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.1□□□□□ -0.63
SCARF1-209ENST00000576012 F5H697 171 aa11.1□□□□□ -0.63
SCARF1-209ENST00000576012 GNRH2O43555 120 aa11.1□□□□□ -0.63
SCARF1-209ENST00000576012 Q1RN00 199 aa11.1□□□□□ -0.63
SCARF1-209ENST00000576012 C3orf56Q8N813 242 aa11.1□□□□□ -0.63
SCARF1-209ENST00000576012 FAM57AQ8TBR7 257 aa11.1□□□□□ -0.63
SCARF1-209ENST00000576012 JPT2Q9H910 190 aa11.1□□□□□ -0.63
SCARF1-209ENST00000576012 C11orf86A6NJI1 115 aa11.1□□□□□ -0.63
SCARF1-209ENST00000576012 A8MWV9 139 aa11.1□□□□□ -0.63
SCARF1-209ENST00000576012 IGHV4-39P01824 125 aa11.1□□□□□ -0.63
SCARF1-209ENST00000576012 SRD5A1P18405 259 aa11.1□□□□□ -0.63
SCARF1-209ENST00000576012 GRNP28799 593 aaKnown RBP11.1□□□□□ -0.63
SCARF1-209ENST00000576012 PIMREGQ9BSJ6 248 aa11.1□□□□□ -0.63
SCARF1-209ENST00000576012 CNFNQ9BYD5 112 aa11.1□□□□□ -0.63
SCARF1-209ENST00000576012 BUB3O43684 328 aa11.09□□□□□ -0.63
SCARF1-209ENST00000576012 OPRPNQ99935 248 aaPredicted RBP11.09□□□□□ -0.63
SCARF1-209ENST00000576012 NEXN-AS1Q8NBZ9 246 aa11.09□□□□□ -0.63
SCARF1-209ENST00000576012 A0A087WWL8 130 aa11.08□□□□□ -0.64
SCARF1-209ENST00000576012 TRAV25A0A0B4J276 109 aa11.08□□□□□ -0.64
SCARF1-209ENST00000576012 LY6LH3BQJ8 138 aa11.08□□□□□ -0.64
SCARF1-209ENST00000576012 RNASE4P34096 147 aaKnown RBP11.08□□□□□ -0.64
SCARF1-209ENST00000576012 FOXC1Q12948 553 aa11.08□□□□□ -0.64
SCARF1-209ENST00000576012 TEX29Q8N6K0 151 aa11.08□□□□□ -0.64
SCARF1-209ENST00000576012 PPDPFLQ8WWR9 84 aa11.08□□□□□ -0.64
SCARF1-209ENST00000576012 ADARB2-AS1A8MUL3 147 aa11.08□□□□□ -0.64
SCARF1-209ENST00000576012 ZNF672Q499Z4 452 aaPredicted RBP11.08□□□□□ -0.64
SCARF1-209ENST00000576012 FAM74A4Q5TZK3 123 aa11.08□□□□□ -0.64
SCARF1-209ENST00000576012 TEN1Q86WV5 123 aa11.08□□□□□ -0.64
SCARF1-209ENST00000576012 NDUFA11Q86Y39 141 aa11.08□□□□□ -0.64
SCARF1-209ENST00000576012 TRAV2A0A0B4J234 112 aa11.07□□□□□ -0.64
SCARF1-209ENST00000576012 PSMG4Q5JS54 123 aa11.07□□□□□ -0.64
SCARF1-209ENST00000576012 TP53TG1Q9Y2A0 90 aa11.07□□□□□ -0.64
SCARF1-209ENST00000576012 TSPEAR-AS2P59090 65 aa11.07□□□□□ -0.64
SCARF1-209ENST00000576012 NPC2P61916 151 aa11.07□□□□□ -0.64
SCARF1-209ENST00000576012 ZFAND6Q6FIF0 208 aa11.07□□□□□ -0.64
SCARF1-209ENST00000576012 OR11H6Q8NGC7 330 aa11.07□□□□□ -0.64
SCARF1-209ENST00000576012 SCGB2A1O75556 95 aa11.06□□□□□ -0.64
SCARF1-209ENST00000576012 ZNF256Q9Y2P7 627 aaPredicted RBP11.06□□□□□ -0.64
SCARF1-209ENST00000576012 IGHV3OR16-10A0A075B7F0 116 aa11.06□□□□□ -0.64
SCARF1-209ENST00000576012 CFC1BP0CG36 223 aa11.06□□□□□ -0.64
SCARF1-209ENST00000576012 CFC1P0CG37 223 aa11.06□□□□□ -0.64
SCARF1-209ENST00000576012 ORMDL2Q53FV1 153 aa11.06□□□□□ -0.64
SCARF1-209ENST00000576012 DOPEY2Q9Y3R5 2298 aa11.06□□□□□ -0.64
SCARF1-209ENST00000576012 CRLF1O75462 422 aa11.06□□□□□ -0.64
SCARF1-209ENST00000576012 ZNF688P0C7X2 276 aa11.06□□□□□ -0.64
SCARF1-209ENST00000576012 Q6ZS92 163 aa11.06□□□□□ -0.64
SCARF1-209ENST00000576012 AJUBAQ96IF1 538 aa11.06□□□□□ -0.64
SCARF1-209ENST00000576012 IGHV7-81A0A0B4J1V7 117 aa11.05□□□□□ -0.64
SCARF1-209ENST00000576012 LINC01546A6NGU7 62 aa11.05□□□□□ -0.64
SCARF1-209ENST00000576012 ATP6V0E1O15342 81 aa11.05□□□□□ -0.64
SCARF1-209ENST00000576012 CD3EP07766 207 aa11.05□□□□□ -0.64
SCARF1-209ENST00000576012 TOMM6Q96B49 74 aa11.05□□□□□ -0.64
SCARF1-209ENST00000576012 C2CD3Q4AC94 2353 aa11.05□□□□□ -0.64
SCARF1-209ENST00000576012 ERG28Q9UKR5 140 aa11.05□□□□□ -0.64
SCARF1-209ENST00000576012 TRAV4A0A0B4J268 109 aa11.04□□□□□ -0.64
SCARF1-209ENST00000576012 CD7P09564 240 aa11.04□□□□□ -0.64
SCARF1-209ENST00000576012 TMEM219Q86XT9 240 aa11.04□□□□□ -0.64
SCARF1-209ENST00000576012 NTN5Q8WTR8 489 aaPredicted RBP11.04□□□□□ -0.64
SCARF1-209ENST00000576012 C20orf173Q96LM9 149 aa11.04□□□□□ -0.64
SCARF1-209ENST00000576012 HRNRQ86YZ3 2850 aaPredicted RBP11.04□□□□□ -0.64
SCARF1-209ENST00000576012 IGKV3-20P01619 116 aa11.04□□□□□ -0.64
SCARF1-209ENST00000576012 COX8CQ7Z4L0 72 aa11.04□□□□□ -0.64
SCARF1-209ENST00000576012 VMO1Q7Z5L0 202 aa11.04□□□□□ -0.64
SCARF1-209ENST00000576012 PSMG3-AS1Q96PY0 264 aa11.04□□□□□ -0.64
SCARF1-209ENST00000576012 A0A0J9YY99 117 aa11.03□□□□□ -0.64
SCARF1-209ENST00000576012 SLC25A20O43772 301 aa11.03□□□□□ -0.64
SCARF1-209ENST00000576012 UBE2D1P51668 147 aa11.03□□□□□ -0.64
SCARF1-209ENST00000576012 CSPG4Q6UVK1 2322 aa11.03□□□□□ -0.64
SCARF1-209ENST00000576012 CACNA1AO00555 2505 aa11.03□□□□□ -0.64
SCARF1-209ENST00000576012 PRSS2P07478 247 aa11.03□□□□□ -0.64
SCARF1-209ENST00000576012 ELANEP08246 267 aa11.03□□□□□ -0.64
SCARF1-209ENST00000576012 C5orf47Q569G3 176 aa11.03□□□□□ -0.64
SCARF1-209ENST00000576012 METTL26Q96S19 204 aa11.03□□□□□ -0.64
SCARF1-209ENST00000576012 ZNF580Q9UK33 172 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms