RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 DOHHQ9BU89 302 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 C9orf16Q9BUW7 83 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 BOKQ9UMX3 212 aaPredicted RBP0.68□□□□□ -2.3
CDC27-218ENST00000575830 ARL2BPQ9Y2Y0 163 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 HEATR1Q9H583 2144 aaKnown RBP0.68□□□□□ -2.3
CDC27-218ENST00000575830 TANC2Q9HCD6 1990 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 hCG_1818297A0A087WSY0 165 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 A8MT66 165 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 OR2T1O43869 369 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 RPSAP08865 295 aaKnown RBP0.67□□□□□ -2.3
CDC27-218ENST00000575830 RNASE3P12724 160 aaKnown RBP0.67□□□□□ -2.3
CDC27-218ENST00000575830 ATP5G3P48201 142 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 MRPS25P82663 173 aaKnown RBP0.67□□□□□ -2.3
CDC27-218ENST00000575830 TMED2Q15363 201 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 FAM173BQ6P4H8 233 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 LCN15Q6UWW0 184 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 C7orf65Q6ZTY9 151 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 COA5Q86WW8 74 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 C15orf53Q8NAA6 179 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 PLPP5Q8NEB5 264 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 OR8B3Q8NGG8 313 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 MCFD2Q8NI22 146 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 SLC25A40Q8TBP6 338 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 GPR146Q96CH1 333 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 SLAMF6Q96DU3 332 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 BTF3L4Q96K17 158 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 LINC01600Q96MT4 127 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 RETNLBQ9BQ08 111 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 CYSTM1Q9H1C7 97 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 MIXL1Q9H2W2 232 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 TVP23BQ9NYZ1 205 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 ERGIC3Q9Y282 383 aa0.67□□□□□ -2.3
CDC27-218ENST00000575830 IGKV1D-42A0A075B6H8 117 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 IGKV2-29A2NJV5 120 aaPredicted RBP0.66□□□□□ -2.3
CDC27-218ENST00000575830 OR5F1O95221 314 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 IFNA4P05014 189 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 HTR1AP08908 422 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 METTL15P1P0C7V9 234 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 TRGC1P0CF51 173 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 CRYGAP11844 174 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 MIFP14174 115 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 SPRR2DP22532 72 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 PPP1R2P41236 205 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 SERPINB9P50453 376 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 BASP1P80723 227 aaKnown RBP0.66□□□□□ -2.3
CDC27-218ENST00000575830 KRR1Q13601 381 aaKnown RBP0.66□□□□□ -2.3
CDC27-218ENST00000575830 ZNF846Q147U1 533 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 HACD4Q5VWC8 232 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 PPP1R2P3Q6NXS1 205 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 CLVS1Q8IUQ0 354 aaPredicted RBP0.66□□□□□ -2.3
CDC27-218ENST00000575830 HIST3H2BBQ8N257 126 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 EXOC3-AS1Q8N2X6 119 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 MBD3L1Q8WWY6 194 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 AP3S1Q92572 193 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 TMEM106AQ96A25 262 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 MUCL1Q96DR8 90 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 Q96M85 177 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 KIFC1Q9BW19 673 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 TMEM126AQ9H061 195 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 CKLFQ9UBR5 152 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 PRNDQ9UKY0 176 aa0.66□□□□□ -2.3
CDC27-218ENST00000575830 TMEM212A6NML5 194 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 ATP6V1G2-DDX39BF2Z307 99 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 TCL1BO95988 128 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 OR4E1P0C645 316 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 FKBP2P26885 142 aaKnown RBP0.65□□□□□ -2.31
CDC27-218ENST00000575830 MAGEA12P43365 314 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 PIGPP57054 158 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 CNBPP62633 177 aaKnown RBP0.65□□□□□ -2.31
CDC27-218ENST00000575830 PDE6HQ13956 83 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 SPA17Q15506 151 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 NDUFA5Q16718 116 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 RRN3P1Q2M238 152 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 FP248Q71RG6 208 aaPredicted RBP0.65□□□□□ -2.31
CDC27-218ENST00000575830 GNPDA2Q8TDQ7 276 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 LCN9Q8WX39 176 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 TSLPQ969D9 159 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 SELENOSQ9BQE4 189 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 YIPF3Q9GZM5 350 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 CCDC90BQ9GZT6 254 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 ENY2Q9NPA8 101 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 C8orf4Q9NR00 106 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 OPTCQ9UBM4 332 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 SMPXQ9UHP9 88 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 EPDR1Q9UM22 224 aa0.65□□□□□ -2.31
CDC27-218ENST00000575830 CHCHD2Q9Y6H1 151 aaPredicted RBP0.65□□□□□ -2.31
CDC27-218ENST00000575830 MEIKINA0A087WXM9 373 aa0.64□□□□□ -2.31
CDC27-218ENST00000575830 A0A087X0T9 212 aa0.64□□□□□ -2.31
CDC27-218ENST00000575830 NBDYA0A0U1RRE5 68 aa0.64□□□□□ -2.31
CDC27-218ENST00000575830 F8W036 122 aa0.64□□□□□ -2.31
CDC27-218ENST00000575830 J3QRK9 145 aa0.64□□□□□ -2.31
CDC27-218ENST00000575830 M0R378 163 aa0.64□□□□□ -2.31
CDC27-218ENST00000575830 SDCBPO00560 298 aaPredicted RBP0.64□□□□□ -2.31
CDC27-218ENST00000575830 MFSD11O43934 449 aa0.64□□□□□ -2.31
CDC27-218ENST00000575830 MRPS14O60783 128 aaKnown RBP0.64□□□□□ -2.31
CDC27-218ENST00000575830 LYZL6O75951 148 aa0.64□□□□□ -2.31
CDC27-218ENST00000575830 PMP2P02689 132 aa0.64□□□□□ -2.31
CDC27-218ENST00000575830 SMIM17P0DL12 118 aa0.64□□□□□ -2.31
CDC27-218ENST00000575830 SPI1P17947 270 aa0.64□□□□□ -2.31
CDC27-218ENST00000575830 ERP29P30040 261 aaKnown RBP0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms