RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 CD7P09564 240 aa6.56□□□□□ -1.36
RPAIN-215ENST00000575112 SAMD13Q5VXD3 122 aa6.56□□□□□ -1.36
RPAIN-215ENST00000575112 USP24Q9UPU5 2620 aa6.56□□□□□ -1.36
RPAIN-215ENST00000575112 MRPS12O15235 138 aaKnown RBP6.55□□□□□ -1.36
RPAIN-215ENST00000575112 IGHV4-59P01825 116 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 PRM2P04554 102 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 CRYGBP07316 175 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 UBE2E1P51965 193 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 SYNJ2BPP57105 145 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 LGALS9BQ3B8N2 356 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 TMEM170BQ5T4T1 132 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 ZC2HC1BQ5TFG8 222 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 LGALS9CQ6DKI2 356 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 CFAP161Q6P656 301 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 OR11H6Q8NGC7 330 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 DYNLRB2Q8TF09 96 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 PHLDA1Q8WV24 401 aaPredicted RBP6.55□□□□□ -1.36
RPAIN-215ENST00000575112 RHPN1-AS1Q9BWJ2 59 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 KLK9Q9UKQ9 250 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 NBEAL2Q6ZNJ1 2754 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 ODF1Q14990 250 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 ITLN2Q8WWU7 325 aaPredicted RBP6.55□□□□□ -1.36
RPAIN-215ENST00000575112 CHAC1Q9BUX1 264 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 A0A0U1RRA0 63 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 INS-IGF2F8WCM5 200 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 APOMO95445 188 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 IGHG4P01861 327 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 FABP2P12104 132 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 RNF185Q96GF1 192 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 JPT2Q9H910 190 aa6.55□□□□□ -1.36
RPAIN-215ENST00000575112 TMEM8BA6NDV4 472 aa6.54□□□□□ -1.36
RPAIN-215ENST00000575112 NDUFS8O00217 210 aa6.54□□□□□ -1.36
RPAIN-215ENST00000575112 FAM159AQ6UWV7 190 aa6.54□□□□□ -1.36
RPAIN-215ENST00000575112 TEP1Q99973 2627 aaKnown RBP6.54□□□□□ -1.36
RPAIN-215ENST00000575112 SMAD5-AS1Q9Y6J3 95 aa6.54□□□□□ -1.36
RPAIN-215ENST00000575112 TNFRSF6BO95407 300 aa6.54□□□□□ -1.36
RPAIN-215ENST00000575112 SMIM13P0DJ93 91 aa6.54□□□□□ -1.36
RPAIN-215ENST00000575112 LMO4P61968 165 aa6.54□□□□□ -1.36
RPAIN-215ENST00000575112 SPAG8Q99932 426 aaPredicted RBP6.54□□□□□ -1.36
RPAIN-215ENST00000575112 ZNF493Q6ZR52 646 aa6.53□□□□□ -1.36
RPAIN-215ENST00000575112 DTX2Q86UW9 622 aa6.53□□□□□ -1.36
RPAIN-215ENST00000575112 MRPL35Q9NZE8 188 aaKnown RBP6.53□□□□□ -1.36
RPAIN-215ENST00000575112 C11orf21Q9P2W6 132 aa6.53□□□□□ -1.36
RPAIN-215ENST00000575112 LY6LH3BQJ8 138 aa6.53□□□□□ -1.36
RPAIN-215ENST00000575112 CD300EQ496F6 205 aaPredicted RBP6.53□□□□□ -1.36
RPAIN-215ENST00000575112 MOB4Q9Y3A3 225 aa6.53□□□□□ -1.36
RPAIN-215ENST00000575112 IGHV1-69DA0A0B4J2H0 117 aa6.53□□□□□ -1.36
RPAIN-215ENST00000575112 F8W735 103 aaPredicted RBP6.53□□□□□ -1.36
RPAIN-215ENST00000575112 IGHV1-69P01742 117 aa6.53□□□□□ -1.36
RPAIN-215ENST00000575112 SPINK13Q1W4C9 94 aa6.53□□□□□ -1.36
RPAIN-215ENST00000575112 PTH2Q96A98 100 aa6.53□□□□□ -1.36
RPAIN-215ENST00000575112 CCDC140Q96MF4 163 aa6.53□□□□□ -1.36
RPAIN-215ENST00000575112 C20orf78Q9BR46 151 aa6.53□□□□□ -1.36
RPAIN-215ENST00000575112 U3KQK5 164 aa6.53□□□□□ -1.36
RPAIN-215ENST00000575112 NIPBLQ6KC79 2804 aaeCLIP6.53□□□□□ -1.36
RPAIN-215ENST00000575112 BUB3O43684 328 aa6.52□□□□□ -1.37
RPAIN-215ENST00000575112 MINOS1Q5TGZ0 78 aa6.52□□□□□ -1.37
RPAIN-215ENST00000575112 TTC9CQ8N5M4 171 aa6.52□□□□□ -1.37
RPAIN-215ENST00000575112 RPL39LQ96EH5 51 aaKnown RBP6.52□□□□□ -1.37
RPAIN-215ENST00000575112 SCGB3A1Q96QR1 104 aa6.52□□□□□ -1.37
RPAIN-215ENST00000575112 MINOS1-NBL1R4GNA1 71 aa6.52□□□□□ -1.37
RPAIN-215ENST00000575112 ANXA2RQ3ZCQ2 193 aa6.52□□□□□ -1.37
RPAIN-215ENST00000575112 RNF5Q99942 180 aa6.52□□□□□ -1.37
RPAIN-215ENST00000575112 RNASE13Q5GAN3 156 aaKnown RBP6.52□□□□□ -1.37
RPAIN-215ENST00000575112 SPANXB1Q9NS25 103 aaPredicted RBP6.52□□□□□ -1.37
RPAIN-215ENST00000575112 GAGE12HA6NDE8 117 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 PRSS29PA6NIE9 313 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 OR11H12B2RN74 326 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 COX6B1P14854 86 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 FHL3Q13643 280 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 DEFB112Q30KQ8 113 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 C1orf122Q6ZSJ8 110 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 LY6G5BQ8NDX9 201 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 OR11H1Q8NG94 326 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 OR9G4Q8NGQ1 327 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 OR11H2Q8NH07 326 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 FAM110DQ8TAY7 271 aaPredicted RBP6.51□□□□□ -1.37
RPAIN-215ENST00000575112 ZNF418Q8TF45 676 aaPredicted RBP6.51□□□□□ -1.37
RPAIN-215ENST00000575112 PSMG3-AS1Q96PY0 264 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 SIRPDQ9H106 197 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 TMEM14CQ9P0S9 112 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 IGLL5B9A064 214 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 AVPP01185 164 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 ID1P41134 155 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 ASIPP42127 132 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 C8orf31Q8N9H6 132 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 ATRQ13535 2644 aa6.51□□□□□ -1.37
RPAIN-215ENST00000575112 CEND1Q8N111 149 aa6.5□□□□□ -1.37
RPAIN-215ENST00000575112 NPBQ8NG41 125 aa6.5□□□□□ -1.37
RPAIN-215ENST00000575112 IGHV3-16A0A0C4DH30 117 aa6.5□□□□□ -1.37
RPAIN-215ENST00000575112 J3QR89 54 aa6.5□□□□□ -1.37
RPAIN-215ENST00000575112 IGKCP01834 107 aa6.5□□□□□ -1.37
RPAIN-215ENST00000575112 MSMBP08118 114 aa6.5□□□□□ -1.37
RPAIN-215ENST00000575112 NPC2P61916 151 aa6.5□□□□□ -1.37
RPAIN-215ENST00000575112 GATD1Q8NB37 220 aa6.5□□□□□ -1.37
RPAIN-215ENST00000575112 AJUBAQ96IF1 538 aa6.5□□□□□ -1.37
RPAIN-215ENST00000575112 UBE2E2Q96LR5 201 aa6.5□□□□□ -1.37
RPAIN-215ENST00000575112 CYSLTR1Q9Y271 337 aa6.5□□□□□ -1.37
RPAIN-215ENST00000575112 GATA3P23771 443 aa6.49□□□□□ -1.37
RPAIN-215ENST00000575112 ZNF479Q96JC4 524 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms