RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 SPINK9Q5DT21 86 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 GPHB5Q86YW7 130 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 NUP35Q8NFH5 326 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 H1FXQ92522 213 aaKnown RBP3.3□□□□□ -1.88
TSR1-203ENST00000575049 NABP2Q9BQ15 211 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 MRPL32Q9BYC8 188 aaKnown RBP3.3□□□□□ -1.88
TSR1-203ENST00000575049 MPDZO75970 2070 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 SPTBP11277 2137 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 IGHV1-24A0A0C4DH33 117 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 C7orf71A4D174 169 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 TMEM189A5PLL7 270 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 J3KT08 172 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 LEPROTL1O95214 131 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 CGB3P0DN86 165 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 CGB7P0DN87 165 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 MGST1P10620 155 aaKnown RBP3.29□□□□□ -1.88
TSR1-203ENST00000575049 RPL7P18124 248 aaKnown RBP3.29□□□□□ -1.88
TSR1-203ENST00000575049 CXCL12P48061 93 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 HBBP68871 147 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 LPAL2Q16609 132 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 LINC01545Q5VT33 79 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
TSR1-203ENST00000575049 Q6Q795 121 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 C2orf91Q6ZV80 131 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 TSTD1Q8NFU3 115 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 OR5A1Q8NGJ0 315 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 UBALD1Q8TB05 177 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 ZNF714Q96N38 554 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 NDFIP1Q9BT67 221 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 TMEM14BQ9NUH8 114 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 ZNRD1Q9P1U0 126 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 RPUSD1Q9UJJ7 312 aaKnown RBP3.29□□□□□ -1.88
TSR1-203ENST00000575049 HSPB8Q9UJY1 196 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 DOCK9Q9BZ29 2069 aa3.29□□□□□ -1.88
TSR1-203ENST00000575049 CACNA1CQ13936 2221 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 PRRC2BQ5JSZ5 2229 aaKnown RBP3.28□□□□□ -1.88
TSR1-203ENST00000575049 TMEM223A0PJW6 202 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 C19orf71A6NCJ1 209 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 IQCF6A8MYZ5 107 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 HSD52Q0P140 79 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 C2orf83Q53S99 150 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 PSMG4Q5JS54 123 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 Q6ZS52 159 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 SSX8Q7RTT4 187 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 GTSCR1Q86UQ5 136 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 BPIFA4PQ86YQ2 179 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 C5orf17Q8NAS9 161 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.28□□□□□ -1.88
TSR1-203ENST00000575049 RNASE6Q93091 150 aaKnown RBP3.28□□□□□ -1.88
TSR1-203ENST00000575049 FAM167A-AS1Q96KT0 104 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 ZNF355PQ9NSJ1 428 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 SPANXCQ9NY87 97 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 AMMECR1Q9Y4X0 333 aaPredicted RBP3.28□□□□□ -1.88
TSR1-203ENST00000575049 EXPH5Q8NEV8 1989 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 ALPK2Q86TB3 2170 aa3.28□□□□□ -1.88
TSR1-203ENST00000575049 THADAQ6YHU6 1953 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 TNRC6AQ8NDV7 1962 aaKnown RBP3.27□□□□□ -1.89
TSR1-203ENST00000575049 IGHV3-21A0A0B4J1V1 117 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 TRAV3A0A0B4J244 114 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 IGHV1-3A0A0C4DH29 117 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 A0A0G2JMM0 328 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 TRBV6-1A0A0K0K1D8 114 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 A0A1B0GX51 115 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 A0A1W2PPB8 328 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 HIGD1CA8MV81 97 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 KIR3DP1A8MWS1 328 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 KLF7O75840 302 aaPredicted RBP3.27□□□□□ -1.89
TSR1-203ENST00000575049 FOXA3P55318 350 aaPredicted RBP3.27□□□□□ -1.89
TSR1-203ENST00000575049 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 RPS28P62857 69 aaKnown RBP3.27□□□□□ -1.89
TSR1-203ENST00000575049 PRCDQ00LT1 54 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 FAM104BQ5XKR9 115 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 SCXQ7RTU7 201 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 AMN1Q8IY45 258 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 DEFB119Q8N690 84 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 OR4X2Q8NGF9 303 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 VSTM2AQ8TAG5 236 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 LINC01560Q8TB33 94 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 AP1S3Q96PC3 154 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 TMEM126AQ9H061 195 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 TP73-AS1Q9UF72 201 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 EPDR1Q9UM22 224 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 BOKQ9UMX3 212 aaPredicted RBP3.27□□□□□ -1.89
TSR1-203ENST00000575049 CELA1Q9UNI1 258 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 PHLDA3Q9Y5J5 127 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 SHANK1Q9Y566 2161 aa3.27□□□□□ -1.89
TSR1-203ENST00000575049 PCNTO95613 3336 aa3.26□□□□□ -1.89
TSR1-203ENST00000575049 TNRC6BQ9UPQ9 1833 aaKnown RBP3.26□□□□□ -1.89
TSR1-203ENST00000575049 GOLGB1Q14789 3259 aaKnown RBP3.26□□□□□ -1.89
TSR1-203ENST00000575049 IGKV1OR2-108A0A075B7D4 117 aa3.26□□□□□ -1.89
TSR1-203ENST00000575049 IGKV3D-20A0A0C4DH25 116 aa3.26□□□□□ -1.89
TSR1-203ENST00000575049 A0A1W2PPM0 123 aa3.26□□□□□ -1.89
TSR1-203ENST00000575049 PINLYPA6NC86 204 aa3.26□□□□□ -1.89
TSR1-203ENST00000575049 IGLL5B9A064 214 aa3.26□□□□□ -1.89
TSR1-203ENST00000575049 K7ERS5 55 aa3.26□□□□□ -1.89
TSR1-203ENST00000575049 RNASE2P10153 161 aaKnown RBP3.26□□□□□ -1.89
TSR1-203ENST00000575049 CSN1S1P47710 185 aa3.26□□□□□ -1.89
TSR1-203ENST00000575049 UBE2L3P68036 154 aaKnown RBP3.26□□□□□ -1.89
TSR1-203ENST00000575049 LGALS9BQ3B8N2 356 aa3.26□□□□□ -1.89
TSR1-203ENST00000575049 LGALS9CQ6DKI2 356 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms