RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 STOML3Q8TAV4 291 aa13.39□□□□□ -0.27
SCARF1-208ENST00000574545 ZC2HC1AQ96GY0 325 aa13.39□□□□□ -0.27
SCARF1-208ENST00000574545 TXNDC17Q9BRA2 123 aa13.39□□□□□ -0.27
SCARF1-208ENST00000574545 ZFP30Q9Y2G7 519 aa13.39□□□□□ -0.27
SCARF1-208ENST00000574545 ABCA13Q86UQ4 5058 aa13.38□□□□□ -0.27
SCARF1-208ENST00000574545 TRBV6-4A0A1B0GX49 114 aa13.38□□□□□ -0.27
SCARF1-208ENST00000574545 TIRAPP58753 221 aa13.38□□□□□ -0.27
SCARF1-208ENST00000574545 WFDC10BQ8IUB3 73 aa13.38□□□□□ -0.27
SCARF1-208ENST00000574545 TCEAL7Q9BRU2 100 aa13.38□□□□□ -0.27
SCARF1-208ENST00000574545 UMAD1C9J7I0 102 aa13.37□□□□□ -0.27
SCARF1-208ENST00000574545 PIK3CD-AS1Q5SR53 167 aa13.37□□□□□ -0.27
SCARF1-208ENST00000574545 DNLZQ5SXM8 178 aa13.37□□□□□ -0.27
SCARF1-208ENST00000574545 FMC1Q96HJ9 113 aa13.37□□□□□ -0.27
SCARF1-208ENST00000574545 ZNF471Q9BX82 626 aaPredicted RBP13.37□□□□□ -0.27
SCARF1-208ENST00000574545 TNFRSF18Q9Y5U5 241 aa13.37□□□□□ -0.27
SCARF1-208ENST00000574545 C16orf90A8MZG2 172 aa13.36□□□□□ -0.27
SCARF1-208ENST00000574545 PAGE4O60829 102 aa13.36□□□□□ -0.27
SCARF1-208ENST00000574545 DNAH10OSP0CZ25 163 aa13.36□□□□□ -0.27
SCARF1-208ENST00000574545 SH2D6Q7Z4S9 175 aa13.36□□□□□ -0.27
SCARF1-208ENST00000574545 IL36BQ9NZH7 164 aa13.36□□□□□ -0.27
SCARF1-208ENST00000574545 LY96Q9Y6Y9 160 aa13.36□□□□□ -0.27
SCARF1-208ENST00000574545 IGHV3-73A0A0B4J1V6 119 aa13.35□□□□□ -0.27
SCARF1-208ENST00000574545 KANTRA0A1W2PQU2 76 aa13.35□□□□□ -0.27
SCARF1-208ENST00000574545 KRBOX1C9JBD0 128 aa13.35□□□□□ -0.27
SCARF1-208ENST00000574545 LTAP01374 205 aa13.35□□□□□ -0.27
SCARF1-208ENST00000574545 ZNF674Q2M3X9 581 aa13.35□□□□□ -0.27
SCARF1-208ENST00000574545 CST9LP1Q5W188 147 aa13.35□□□□□ -0.27
SCARF1-208ENST00000574545 SPATA12Q7Z6I5 190 aa13.35□□□□□ -0.27
SCARF1-208ENST00000574545 FAM213BQ8TBF2 198 aa13.35□□□□□ -0.27
SCARF1-208ENST00000574545 SFT2D1Q8WV19 159 aa13.35□□□□□ -0.27
SCARF1-208ENST00000574545 B4DEV8 164 aa13.34□□□□□ -0.27
SCARF1-208ENST00000574545 K7EP13 123 aa13.34□□□□□ -0.27
SCARF1-208ENST00000574545 SH2D1AO60880 128 aa13.34□□□□□ -0.27
SCARF1-208ENST00000574545 ASIPP42127 132 aa13.34□□□□□ -0.27
SCARF1-208ENST00000574545 KRTAP10-2P60368 255 aa13.34□□□□□ -0.27
SCARF1-208ENST00000574545 UBE2G1P62253 170 aa13.34□□□□□ -0.27
SCARF1-208ENST00000574545 RHOHQ15669 191 aa13.34□□□□□ -0.27
SCARF1-208ENST00000574545 Q6ZSN1 163 aa13.34□□□□□ -0.27
SCARF1-208ENST00000574545 TMUB2Q71RG4 321 aa13.34□□□□□ -0.27
SCARF1-208ENST00000574545 PARLQ9H300 379 aa13.34□□□□□ -0.27
SCARF1-208ENST00000574545 S100A4P26447 101 aaKnown RBP13.33□□□□□ -0.28
SCARF1-208ENST00000574545 UFSP1Q6NVU6 142 aa13.33□□□□□ -0.28
SCARF1-208ENST00000574545 ZFP2Q6ZN57 461 aa13.33□□□□□ -0.28
SCARF1-208ENST00000574545 NHLRC2Q8NBF2 726 aa13.33□□□□□ -0.28
SCARF1-208ENST00000574545 PRADC1Q9BSG0 188 aa13.33□□□□□ -0.28
SCARF1-208ENST00000574545 DNAH8Q96JB1 4490 aa13.32□□□□□ -0.28
SCARF1-208ENST00000574545 TRAV9-2A0A087WT02 112 aa13.32□□□□□ -0.28
SCARF1-208ENST00000574545 A8MWV9 139 aa13.32□□□□□ -0.28
SCARF1-208ENST00000574545 MGST1P10620 155 aaKnown RBP13.32□□□□□ -0.28
SCARF1-208ENST00000574545 EIF5AP63241 154 aaKnown RBP13.32□□□□□ -0.28
SCARF1-208ENST00000574545 LINC01559Q495D7 138 aa13.32□□□□□ -0.28
SCARF1-208ENST00000574545 FAM162BQ5T6X4 162 aa13.32□□□□□ -0.28
SCARF1-208ENST00000574545 DMRTA1Q5VZB9 504 aa13.32□□□□□ -0.28
SCARF1-208ENST00000574545 JPT2Q9H910 190 aa13.32□□□□□ -0.28
SCARF1-208ENST00000574545 SCRT2Q9NQ03 307 aa13.32□□□□□ -0.28
SCARF1-208ENST00000574545 H3BVH4 76 aa13.31□□□□□ -0.28
SCARF1-208ENST00000574545 M0R036 132 aa13.31□□□□□ -0.28
SCARF1-208ENST00000574545 ARMS2P0C7Q2 107 aa13.31□□□□□ -0.28
SCARF1-208ENST00000574545 AKR1C3P42330 323 aa13.31□□□□□ -0.28
SCARF1-208ENST00000574545 MLST8Q9BVC4 326 aa13.31□□□□□ -0.28
SCARF1-208ENST00000574545 SAMD10Q9BYL1 202 aa13.31□□□□□ -0.28
SCARF1-208ENST00000574545 A0A1B0GV50 99 aa13.3□□□□□ -0.28
SCARF1-208ENST00000574545 GRIFINA4D1Z8 144 aa13.3□□□□□ -0.28
SCARF1-208ENST00000574545 H2AFB1P0C5Y9 115 aa13.3□□□□□ -0.28
SCARF1-208ENST00000574545 LINC00694P0DN24 101 aa13.3□□□□□ -0.28
SCARF1-208ENST00000574545 TPT1P13693 172 aaKnown RBP13.3□□□□□ -0.28
SCARF1-208ENST00000574545 EVI2AP22794 236 aa13.3□□□□□ -0.28
SCARF1-208ENST00000574545 LGALSLQ3ZCW2 172 aaPredicted RBP13.3□□□□□ -0.28
SCARF1-208ENST00000574545 NFE4Q86UQ8 179 aa13.3□□□□□ -0.28
SCARF1-208ENST00000574545 SCO2A0A1W2PP80 73 aa13.29□□□□□ -0.28
SCARF1-208ENST00000574545 CDK2AP2O75956 126 aa13.29□□□□□ -0.28
SCARF1-208ENST00000574545 MSRB1Q9NZV6 116 aa13.29□□□□□ -0.28
SCARF1-208ENST00000574545 Q9UF83 564 aa13.29□□□□□ -0.28
SCARF1-208ENST00000574545 IGHV3-38A0A0C4DH36 116 aa13.28□□□□□ -0.28
SCARF1-208ENST00000574545 PFDN1O60925 122 aa13.28□□□□□ -0.28
SCARF1-208ENST00000574545 S100A9P06702 114 aaKnown RBP13.28□□□□□ -0.28
SCARF1-208ENST00000574545 CCL20P78556 96 aa13.28□□□□□ -0.28
SCARF1-208ENST00000574545 LINC01556Q5JQF7 62 aa13.28□□□□□ -0.28
SCARF1-208ENST00000574545 FAT1Q14517 4588 aa13.27□□□□□ -0.28
SCARF1-208ENST00000574545 CRYGDP07320 174 aa13.27□□□□□ -0.29
SCARF1-208ENST00000574545 LELP1Q5T871 98 aa13.27□□□□□ -0.29
SCARF1-208ENST00000574545 TCTE3Q8IZS6 198 aa13.27□□□□□ -0.29
SCARF1-208ENST00000574545 ATP6V0E2Q8NHE4 81 aa13.27□□□□□ -0.29
SCARF1-208ENST00000574545 GTSF1LQ9H1H1 148 aa13.27□□□□□ -0.29
SCARF1-208ENST00000574545 TMSB15BA0A087X1C1 80 aa13.26□□□□□ -0.29
SCARF1-208ENST00000574545 TRAV1-1A0A0B4J248 108 aa13.26□□□□□ -0.29
SCARF1-208ENST00000574545 C10orf126Q8N4M7 172 aa13.26□□□□□ -0.29
SCARF1-208ENST00000574545 C14orf178Q8N769 122 aaPredicted RBP13.26□□□□□ -0.29
SCARF1-208ENST00000574545 SFRP2Q96HF1 295 aa13.26□□□□□ -0.29
SCARF1-208ENST00000574545 Q6ZNX1 250 aa13.25□□□□□ -0.29
SCARF1-208ENST00000574545 BAGE2Q86Y30 109 aa13.25□□□□□ -0.29
SCARF1-208ENST00000574545 SYT8Q8NBV8 401 aa13.25□□□□□ -0.29
SCARF1-208ENST00000574545 KRTAP4-5Q9BYR2 181 aa13.25□□□□□ -0.29
SCARF1-208ENST00000574545 A0A087WTM6 91 aa13.24□□□□□ -0.29
SCARF1-208ENST00000574545 TRAV8-6A0A0B4J262 113 aa13.24□□□□□ -0.29
SCARF1-208ENST00000574545 IBA57-AS1B1ANH7 110 aa13.24□□□□□ -0.29
SCARF1-208ENST00000574545 RAB5CP51148 216 aa13.24□□□□□ -0.29
SCARF1-208ENST00000574545 ERVFC1-1P60608 527 aa13.24□□□□□ -0.29
SCARF1-208ENST00000574545 OR10J3Q5JRS4 329 aa13.24□□□□□ -0.29
SCARF1-208ENST00000574545 BOLA1Q9Y3E2 137 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms