RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 SPXQ9BT56 116 aa9.74□□□□□ -0.85
TVP23A-208ENST00000573857 TREM1Q9NP99 234 aa9.74□□□□□ -0.85
TVP23A-208ENST00000573857 TNFRSF18Q9Y5U5 241 aa9.74□□□□□ -0.85
TVP23A-208ENST00000573857 TRGV11A0A075B6L2 103 aa9.73□□□□□ -0.85
TVP23A-208ENST00000573857 TRBV6-1A0A0K0K1D8 114 aa9.73□□□□□ -0.85
TVP23A-208ENST00000573857 SRIP30626 198 aa9.73□□□□□ -0.85
TVP23A-208ENST00000573857 ERVFC1-1P60608 527 aa9.73□□□□□ -0.85
TVP23A-208ENST00000573857 UBE2G1P62253 170 aa9.73□□□□□ -0.85
TVP23A-208ENST00000573857 GNG5P63218 68 aa9.73□□□□□ -0.85
TVP23A-208ENST00000573857 MEF2BQ02080 365 aaPredicted RBP9.73□□□□□ -0.85
TVP23A-208ENST00000573857 LYPD6BQ8NI32 183 aa9.73□□□□□ -0.85
TVP23A-208ENST00000573857 PGPEP1Q9NXJ5 209 aa9.73□□□□□ -0.85
TVP23A-208ENST00000573857 VAX2Q9UIW0 290 aa9.73□□□□□ -0.85
TVP23A-208ENST00000573857 PSG8Q9UQ74 426 aa9.73□□□□□ -0.85
TVP23A-208ENST00000573857 ZFP30Q9Y2G7 519 aa9.73□□□□□ -0.85
TVP23A-208ENST00000573857 BCL2P10415 239 aa9.72□□□□□ -0.85
TVP23A-208ENST00000573857 GYPEP15421 78 aa9.72□□□□□ -0.85
TVP23A-208ENST00000573857 TDRG1Q3Y452 100 aa9.72□□□□□ -0.85
TVP23A-208ENST00000573857 NFE4Q86UQ8 179 aa9.72□□□□□ -0.85
TVP23A-208ENST00000573857 PCNPQ8WW12 178 aaKnown RBP9.72□□□□□ -0.85
TVP23A-208ENST00000573857 NAGKQ9UJ70 344 aa9.72□□□□□ -0.85
TVP23A-208ENST00000573857 LY96Q9Y6Y9 160 aa9.72□□□□□ -0.85
TVP23A-208ENST00000573857 TRAV9-2A0A087WT02 112 aa9.71□□□□□ -0.86
TVP23A-208ENST00000573857 TRAV4A0A0B4J268 109 aa9.71□□□□□ -0.86
TVP23A-208ENST00000573857 EREGO14944 169 aa9.71□□□□□ -0.86
TVP23A-208ENST00000573857 NDUFS6O75380 124 aaKnown RBP9.71□□□□□ -0.86
TVP23A-208ENST00000573857 ORM1P02763 201 aa9.71□□□□□ -0.86
TVP23A-208ENST00000573857 FUSP35637 526 aaKnown RBP eCLIP9.71□□□□□ -0.86
TVP23A-208ENST00000573857 AKR1C3P42330 323 aa9.71□□□□□ -0.86
TVP23A-208ENST00000573857 CCL20P78556 96 aa9.71□□□□□ -0.86
TVP23A-208ENST00000573857 PRNTQ86SH4 94 aa9.71□□□□□ -0.86
TVP23A-208ENST00000573857 WFDC10BQ8IUB3 73 aa9.71□□□□□ -0.86
TVP23A-208ENST00000573857 FAT1Q14517 4588 aa9.71□□□□□ -0.86
TVP23A-208ENST00000573857 TRAV8-1A0A0A6YYK1 113 aa9.7□□□□□ -0.86
TVP23A-208ENST00000573857 TRAV21A0A0B4J279 112 aa9.7□□□□□ -0.86
TVP23A-208ENST00000573857 IGHV3-16A0A0C4DH30 117 aa9.7□□□□□ -0.86
TVP23A-208ENST00000573857 K7EP13 123 aa9.7□□□□□ -0.86
TVP23A-208ENST00000573857 M0R2P5 195 aa9.7□□□□□ -0.86
TVP23A-208ENST00000573857 IGLV2-11P01706 119 aa9.7□□□□□ -0.86
TVP23A-208ENST00000573857 RAB14P61106 215 aa9.7□□□□□ -0.86
TVP23A-208ENST00000573857 SMUG1Q53HV7 270 aa9.7□□□□□ -0.86
TVP23A-208ENST00000573857 CDPF1Q6NVV7 123 aa9.7□□□□□ -0.86
TVP23A-208ENST00000573857 C9JCJ5 164 aa9.69□□□□□ -0.86
TVP23A-208ENST00000573857 GNRH2O43555 120 aa9.69□□□□□ -0.86
TVP23A-208ENST00000573857 DNAH10OSP0CZ25 163 aa9.69□□□□□ -0.86
TVP23A-208ENST00000573857 OR4C5Q8NGB2 326 aa9.69□□□□□ -0.86
TVP23A-208ENST00000573857 C11orf52Q96A22 123 aa9.69□□□□□ -0.86
TVP23A-208ENST00000573857 TVP23CQ96ET8 276 aa9.69□□□□□ -0.86
TVP23A-208ENST00000573857 KCNS1Q96KK3 526 aa9.69□□□□□ -0.86
TVP23A-208ENST00000573857 MSRB1Q9NZV6 116 aa9.69□□□□□ -0.86
TVP23A-208ENST00000573857 HERC1Q15751 4861 aa9.68□□□□□ -0.86
TVP23A-208ENST00000573857 A0A087WTM6 91 aa9.68□□□□□ -0.86
TVP23A-208ENST00000573857 RBFOX3A6NFN3 312 aa9.68□□□□□ -0.86
TVP23A-208ENST00000573857 PFN1P07737 140 aaKnown RBP9.68□□□□□ -0.86
TVP23A-208ENST00000573857 EVI2AP22794 236 aa9.68□□□□□ -0.86
TVP23A-208ENST00000573857 COX8CQ7Z4L0 72 aa9.68□□□□□ -0.86
TVP23A-208ENST00000573857 Q86TA4 180 aa9.68□□□□□ -0.86
TVP23A-208ENST00000573857 SMIM12Q96EX1 92 aa9.68□□□□□ -0.86
TVP23A-208ENST00000573857 LOC100131303A0A0U1RQF7 123 aa9.67□□□□□ -0.86
TVP23A-208ENST00000573857 TMEM250H0YL14 139 aa9.67□□□□□ -0.86
TVP23A-208ENST00000573857 LTAP01374 205 aa9.67□□□□□ -0.86
TVP23A-208ENST00000573857 TYMSP04818 313 aa9.67□□□□□ -0.86
TVP23A-208ENST00000573857 SGK494Q96LW2 274 aa9.67□□□□□ -0.86
TVP23A-208ENST00000573857 LINC00479Q96M42 142 aa9.67□□□□□ -0.86
TVP23A-208ENST00000573857 SMDT1Q9H4I9 107 aa9.67□□□□□ -0.86
TVP23A-208ENST00000573857 SDF2L1Q9HCN8 221 aa9.67□□□□□ -0.86
TVP23A-208ENST00000573857 TRAV34A0A0B4J273 112 aa9.66□□□□□ -0.86
TVP23A-208ENST00000573857 SCO2A0A1W2PP80 73 aa9.66□□□□□ -0.86
TVP23A-208ENST00000573857 FABP5P3A8MUU1 101 aa9.66□□□□□ -0.86
TVP23A-208ENST00000573857 GCGP01275 180 aa9.66□□□□□ -0.86
TVP23A-208ENST00000573857 GATA1P15976 413 aaPredicted RBP9.66□□□□□ -0.86
TVP23A-208ENST00000573857 SH2D6Q7Z4S9 175 aa9.66□□□□□ -0.86
TVP23A-208ENST00000573857 EIF5A2Q9GZV4 153 aaKnown RBP9.66□□□□□ -0.86
TVP23A-208ENST00000573857 BIN3Q9NQY0 253 aa9.66□□□□□ -0.86
TVP23A-208ENST00000573857 MED9Q9NWA0 146 aa9.66□□□□□ -0.86
TVP23A-208ENST00000573857 EPM2AB3EWF7 344 aa9.65□□□□□ -0.86
TVP23A-208ENST00000573857 CRYGDP07320 174 aa9.65□□□□□ -0.86
TVP23A-208ENST00000573857 RPL35P42766 123 aaKnown RBP9.65□□□□□ -0.86
TVP23A-208ENST00000573857 XGP55808 180 aa9.65□□□□□ -0.86
TVP23A-208ENST00000573857 TIRAPP58753 221 aa9.65□□□□□ -0.86
TVP23A-208ENST00000573857 ZNF506Q5JVG8 444 aa9.65□□□□□ -0.86
TVP23A-208ENST00000573857 FAM162BQ5T6X4 162 aa9.65□□□□□ -0.86
TVP23A-208ENST00000573857 BAGE2Q86Y30 109 aa9.65□□□□□ -0.86
TVP23A-208ENST00000573857 C10orf126Q8N4M7 172 aa9.65□□□□□ -0.86
TVP23A-208ENST00000573857 NHLRC2Q8NBF2 726 aa9.65□□□□□ -0.86
TVP23A-208ENST00000573857 FAM210AQ96ND0 272 aa9.65□□□□□ -0.86
TVP23A-208ENST00000573857 GNG4P50150 75 aa9.64□□□□□ -0.87
TVP23A-208ENST00000573857 KRTAP10-1P60331 282 aa9.64□□□□□ -0.87
TVP23A-208ENST00000573857 IGHV3-38A0A0C4DH36 116 aa9.63□□□□□ -0.87
TVP23A-208ENST00000573857 ZNF80P51504 273 aaPredicted RBP9.63□□□□□ -0.87
TVP23A-208ENST00000573857 PEA15Q15121 130 aa9.63□□□□□ -0.87
TVP23A-208ENST00000573857 ZNF876PQ49A33 203 aa9.63□□□□□ -0.87
TVP23A-208ENST00000573857 C11orf21Q9P2W6 132 aa9.63□□□□□ -0.87
TVP23A-208ENST00000573857 VPS13BQ7Z7G8 4022 aa9.63□□□□□ -0.87
TVP23A-208ENST00000573857 LINC01556Q5JQF7 62 aa9.62□□□□□ -0.87
TVP23A-208ENST00000573857 TOR2AQ5JU69 321 aa9.62□□□□□ -0.87
TVP23A-208ENST00000573857 CFAP126Q5VTH2 177 aa9.62□□□□□ -0.87
TVP23A-208ENST00000573857 SLC25A29Q8N8R3 303 aa9.62□□□□□ -0.87
TVP23A-208ENST00000573857 MLST8Q9BVC4 326 aa9.62□□□□□ -0.87
TVP23A-208ENST00000573857 RS1O15537 224 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms