RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 CDH23Q9H251 3354 aa9.63□□□□□ -0.87
PCDHGA9-201ENST00000573521 UBE2E2Q96LR5 201 aa9.62□□□□□ -0.87
PCDHGA9-201ENST00000573521 C17orf77Q96MU5 243 aa9.62□□□□□ -0.87
PCDHGA9-201ENST00000573521 UNC80Q8N2C7 3258 aa9.62□□□□□ -0.87
PCDHGA9-201ENST00000573521 CDK2AP2O75956 126 aa9.62□□□□□ -0.87
PCDHGA9-201ENST00000573521 MAJINQ3KP22 176 aa9.62□□□□□ -0.87
PCDHGA9-201ENST00000573521 LINC01620Q4KN68 170 aa9.62□□□□□ -0.87
PCDHGA9-201ENST00000573521 ACACAQ13085 2346 aa9.62□□□□□ -0.87
PCDHGA9-201ENST00000573521 JMJD7-PLA2G4BH0Y9G9 81 aa9.62□□□□□ -0.87
PCDHGA9-201ENST00000573521 LY6DQ14210 128 aa9.62□□□□□ -0.87
PCDHGA9-201ENST00000573521 DAZAP2Q15038 168 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA9-201ENST00000573521 IGKV1OR2-108A0A075B7D4 117 aa9.62□□□□□ -0.87
PCDHGA9-201ENST00000573521 A0A0B4J2C4 111 aa9.62□□□□□ -0.87
PCDHGA9-201ENST00000573521 G3V4G9 280 aa9.62□□□□□ -0.87
PCDHGA9-201ENST00000573521 EP300Q09472 2414 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA9-201ENST00000573521 GVINP1Q7Z2Y8 2422 aa9.61□□□□□ -0.87
PCDHGA9-201ENST00000573521 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
PCDHGA9-201ENST00000573521 DAD1P61803 113 aa9.61□□□□□ -0.87
PCDHGA9-201ENST00000573521 KLK9Q9UKQ9 250 aa9.61□□□□□ -0.87
PCDHGA9-201ENST00000573521 ATRXP46100 2492 aa9.61□□□□□ -0.87
PCDHGA9-201ENST00000573521 IGHV3-53P01767 116 aa9.61□□□□□ -0.87
PCDHGA9-201ENST00000573521 RUSC1-AS1Q66K80 236 aa9.61□□□□□ -0.87
PCDHGA9-201ENST00000573521 Q8N9W7 124 aa9.61□□□□□ -0.87
PCDHGA9-201ENST00000573521 XCL2Q9UBD3 114 aa9.61□□□□□ -0.87
PCDHGA9-201ENST00000573521 SUMO4Q6EEV6 95 aa9.61□□□□□ -0.87
PCDHGA9-201ENST00000573521 KMT2EQ8IZD2 1858 aa9.61□□□□□ -0.87
PCDHGA9-201ENST00000573521 NSUN5P1Q3KNT7 163 aa9.6□□□□□ -0.87
PCDHGA9-201ENST00000573521 PRR31Q5SQ13 230 aa9.6□□□□□ -0.87
PCDHGA9-201ENST00000573521 MORN5Q5VZ52 161 aa9.6□□□□□ -0.87
PCDHGA9-201ENST00000573521 TRBV10-1A0A0K0K1A3 114 aa9.6□□□□□ -0.87
PCDHGA9-201ENST00000573521 K7ERJ3 54 aa9.6□□□□□ -0.87
PCDHGA9-201ENST00000573521 BAALC-AS2P0C853 105 aa9.6□□□□□ -0.87
PCDHGA9-201ENST00000573521 TMEM258P61165 79 aa9.6□□□□□ -0.87
PCDHGA9-201ENST00000573521 RANBP2P49792 3224 aaKnown RBP9.6□□□□□ -0.87
PCDHGA9-201ENST00000573521 YLPM1P49750 1951 aaKnown RBP9.6□□□□□ -0.87
PCDHGA9-201ENST00000573521 IGLV2-8P01709 118 aa9.6□□□□□ -0.87
PCDHGA9-201ENST00000573521 FOXI1Q12951 378 aa9.6□□□□□ -0.87
PCDHGA9-201ENST00000573521 C16orf74Q96GX8 76 aa9.6□□□□□ -0.87
PCDHGA9-201ENST00000573521 RPL35AP18077 110 aaKnown RBP9.6□□□□□ -0.87
PCDHGA9-201ENST00000573521 TM2D2Q9BX73 214 aa9.6□□□□□ -0.87
PCDHGA9-201ENST00000573521 WT1P19544 449 aaPredicted RBP9.59□□□□□ -0.87
PCDHGA9-201ENST00000573521 ICOSQ9Y6W8 199 aa9.59□□□□□ -0.87
PCDHGA9-201ENST00000573521 LY6HO94772 140 aa9.59□□□□□ -0.87
PCDHGA9-201ENST00000573521 A0A0J9YXY3 114 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 CRLF1O75462 422 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 IGLC6P0CF74 106 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 AMTNQ6UX39 209 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 C5orf56Q8N8D9 126 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 ZNF503Q96F45 646 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 Q9H8V8 135 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 MALRD1Q5VYJ5 2156 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 IGKV1D-37A0A075B6S9 117 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 NKAPP1Q8N9T2 125 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 BAALCQ8WXS3 180 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 MDFICQ9P1T7 246 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 EML6Q6ZMW3 1958 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 AKAP6Q13023 2319 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 A4D1N5 150 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 KNCNA6PVL3 124 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 TDRG1Q3Y452 100 aa9.58□□□□□ -0.88
PCDHGA9-201ENST00000573521 RIF1Q5UIP0 2472 aaKnown RBP9.57□□□□□ -0.88
PCDHGA9-201ENST00000573521 IGHG2P01859 326 aa9.57□□□□□ -0.88
PCDHGA9-201ENST00000573521 FXYD2P54710 66 aa9.57□□□□□ -0.88
PCDHGA9-201ENST00000573521 CRIP3Q6Q6R5 217 aa9.57□□□□□ -0.88
PCDHGA9-201ENST00000573521 PRSS33Q8NF86 280 aa9.57□□□□□ -0.88
PCDHGA9-201ENST00000573521 GNRH2O43555 120 aa9.57□□□□□ -0.88
PCDHGA9-201ENST00000573521 ZNF295-AS1Q8N0V1 137 aa9.57□□□□□ -0.88
PCDHGA9-201ENST00000573521 SPANXB1Q9NS25 103 aaPredicted RBP9.57□□□□□ -0.88
PCDHGA9-201ENST00000573521 PTPRSQ13332 1948 aa9.56□□□□□ -0.88
PCDHGA9-201ENST00000573521 DEFB130BP0DP73 79 aa9.56□□□□□ -0.88
PCDHGA9-201ENST00000573521 DEFB130AP0DP74 79 aa9.56□□□□□ -0.88
PCDHGA9-201ENST00000573521 HOXD3P31249 432 aaPredicted RBP9.56□□□□□ -0.88
PCDHGA9-201ENST00000573521 ROS1P08922 2347 aa9.56□□□□□ -0.88
PCDHGA9-201ENST00000573521 CACNA1HO95180 2353 aa9.56□□□□□ -0.88
PCDHGA9-201ENST00000573521 ZNF625Q96I27 306 aaPredicted RBP9.56□□□□□ -0.88
PCDHGA9-201ENST00000573521 U3KQK5 164 aa9.56□□□□□ -0.88
PCDHGA9-201ENST00000573521 IGHV1-58A0A0C4DH39 117 aa9.55□□□□□ -0.88
PCDHGA9-201ENST00000573521 LINC00173Q6ZV60 143 aa9.55□□□□□ -0.88
PCDHGA9-201ENST00000573521 C20orf203Q8NBC4 194 aa9.55□□□□□ -0.88
PCDHGA9-201ENST00000573521 RNASE8Q8TDE3 154 aaKnown RBP9.55□□□□□ -0.88
PCDHGA9-201ENST00000573521 K7EQD1 137 aa9.55□□□□□ -0.88
PCDHGA9-201ENST00000573521 PFN2P35080 140 aa9.55□□□□□ -0.88
PCDHGA9-201ENST00000573521 Q8N1Y9 231 aa9.55□□□□□ -0.88
PCDHGA9-201ENST00000573521 U3KQE9 123 aa9.55□□□□□ -0.88
PCDHGA9-201ENST00000573521 SP5Q6BEB4 398 aaPredicted RBP9.55□□□□□ -0.88
PCDHGA9-201ENST00000573521 MUSTN1Q8IVN3 82 aa9.55□□□□□ -0.88
PCDHGA9-201ENST00000573521 FANCD2OSQ96PS1 177 aa9.55□□□□□ -0.88
PCDHGA9-201ENST00000573521 TRAV12-2A0A075B6T6 113 aa9.54□□□□□ -0.88
PCDHGA9-201ENST00000573521 EBI3Q14213 229 aa9.54□□□□□ -0.88
PCDHGA9-201ENST00000573521 PKDREJQ9NTG1 2253 aa9.54□□□□□ -0.88
PCDHGA9-201ENST00000573521 LINC00643Q86TS7 51 aa9.54□□□□□ -0.88
PCDHGA9-201ENST00000573521 H7C423 109 aa9.54□□□□□ -0.88
PCDHGA9-201ENST00000573521 ODF3BA8MYP8 253 aa9.54□□□□□ -0.88
PCDHGA9-201ENST00000573521 MYCNOSP40205 109 aa9.54□□□□□ -0.88
PCDHGA9-201ENST00000573521 AJUBAQ96IF1 538 aa9.54□□□□□ -0.88
PCDHGA9-201ENST00000573521 PRR30Q53SZ7 412 aaPredicted RBP9.53□□□□□ -0.88
PCDHGA9-201ENST00000573521 BRWD1-AS2P59051 145 aa9.53□□□□□ -0.88
PCDHGA9-201ENST00000573521 OPRPNQ99935 248 aaPredicted RBP9.53□□□□□ -0.88
PCDHGA9-201ENST00000573521 SIRPDQ9H106 197 aa9.53□□□□□ -0.88
PCDHGA9-201ENST00000573521 TMEM131Q92545 1883 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms