RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 UBE2G1P62253 170 aa8.68□□□□□ -1.02
NPLOC4-213ENST00000573519 CCL20P78556 96 aa8.68□□□□□ -1.02
NPLOC4-213ENST00000573519 AKAP14Q86UN6 197 aa8.68□□□□□ -1.02
NPLOC4-213ENST00000573519 ZC2HC1AQ96GY0 325 aa8.68□□□□□ -1.02
NPLOC4-213ENST00000573519 KRTAP17-1Q9BYP8 105 aa8.68□□□□□ -1.02
NPLOC4-213ENST00000573519 LY96Q9Y6Y9 160 aa8.68□□□□□ -1.02
NPLOC4-213ENST00000573519 TRAV9-2A0A087WT02 112 aa8.67□□□□□ -1.02
NPLOC4-213ENST00000573519 IGKV3D-20A0A0C4DH25 116 aa8.67□□□□□ -1.02
NPLOC4-213ENST00000573519 SCO2A0A1W2PP80 73 aa8.67□□□□□ -1.02
NPLOC4-213ENST00000573519 FABP5P3A8MUU1 101 aa8.67□□□□□ -1.02
NPLOC4-213ENST00000573519 BTF3P20290 206 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-213ENST00000573519 S100A4P26447 101 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-213ENST00000573519 CRIP1P50238 77 aa8.67□□□□□ -1.02
NPLOC4-213ENST00000573519 DYNC1H1Q14204 4646 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-213ENST00000573519 CFAP126Q5VTH2 177 aa8.67□□□□□ -1.02
NPLOC4-213ENST00000573519 WFDC10BQ8IUB3 73 aa8.67□□□□□ -1.02
NPLOC4-213ENST00000573519 FMC1Q96HJ9 113 aa8.67□□□□□ -1.02
NPLOC4-213ENST00000573519 C9orf85Q96MD7 179 aa8.67□□□□□ -1.02
NPLOC4-213ENST00000573519 PGPEP1LA6NFU8 196 aa8.66□□□□□ -1.02
NPLOC4-213ENST00000573519 M0R036 132 aa8.66□□□□□ -1.02
NPLOC4-213ENST00000573519 RS1O15537 224 aa8.66□□□□□ -1.02
NPLOC4-213ENST00000573519 RNASE3P12724 160 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-213ENST00000573519 GATA1P15976 413 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-213ENST00000573519 ZNF506Q5JVG8 444 aa8.66□□□□□ -1.02
NPLOC4-213ENST00000573519 SLC25A29Q8N8R3 303 aa8.66□□□□□ -1.02
NPLOC4-213ENST00000573519 PRADC1Q9BSG0 188 aa8.66□□□□□ -1.02
NPLOC4-213ENST00000573519 GNG13Q9P2W3 67 aa8.66□□□□□ -1.02
NPLOC4-213ENST00000573519 ZFP30Q9Y2G7 519 aa8.66□□□□□ -1.02
NPLOC4-213ENST00000573519 TNFRSF18Q9Y5U5 241 aa8.66□□□□□ -1.02
NPLOC4-213ENST00000573519 TRBV6-1A0A0K0K1D8 114 aa8.65□□□□□ -1.02
NPLOC4-213ENST00000573519 A0A1B0GVG6 124 aa8.65□□□□□ -1.02
NPLOC4-213ENST00000573519 GRIFINA4D1Z8 144 aa8.65□□□□□ -1.02
NPLOC4-213ENST00000573519 B4DEV8 164 aa8.65□□□□□ -1.02
NPLOC4-213ENST00000573519 SH2D1AO60880 128 aa8.65□□□□□ -1.02
NPLOC4-213ENST00000573519 LTAP01374 205 aa8.65□□□□□ -1.02
NPLOC4-213ENST00000573519 EVI2AP22794 236 aa8.65□□□□□ -1.02
NPLOC4-213ENST00000573519 ASIPP42127 132 aa8.65□□□□□ -1.02
NPLOC4-213ENST00000573519 EIF5AL1Q6IS14 154 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-213ENST00000573519 SH2D6Q7Z4S9 175 aa8.65□□□□□ -1.02
NPLOC4-213ENST00000573519 SLC51BQ86UW2 128 aa8.65□□□□□ -1.02
NPLOC4-213ENST00000573519 TCEAL7Q9BRU2 100 aa8.65□□□□□ -1.02
NPLOC4-213ENST00000573519 TMSB15BA0A087X1C1 80 aa8.64□□□□□ -1.03
NPLOC4-213ENST00000573519 SULT1A2P50226 295 aa8.64□□□□□ -1.03
NPLOC4-213ENST00000573519 RAB5CP51148 216 aa8.64□□□□□ -1.03
NPLOC4-213ENST00000573519 RHOHQ15669 191 aa8.64□□□□□ -1.03
NPLOC4-213ENST00000573519 FAM162BQ5T6X4 162 aa8.64□□□□□ -1.03
NPLOC4-213ENST00000573519 Q6ZRN7 208 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-213ENST00000573519 COX8CQ7Z4L0 72 aa8.64□□□□□ -1.03
NPLOC4-213ENST00000573519 NFE4Q86UQ8 179 aa8.64□□□□□ -1.03
NPLOC4-213ENST00000573519 C9orf62Q8N4C0 152 aa8.64□□□□□ -1.03
NPLOC4-213ENST00000573519 TRAV1-1A0A0B4J248 108 aa8.63□□□□□ -1.03
NPLOC4-213ENST00000573519 TRBV6-4A0A1B0GX49 114 aa8.63□□□□□ -1.03
NPLOC4-213ENST00000573519 KRBOX1C9JBD0 128 aa8.63□□□□□ -1.03
NPLOC4-213ENST00000573519 H3BVH4 76 aa8.63□□□□□ -1.03
NPLOC4-213ENST00000573519 EREGO14944 169 aa8.63□□□□□ -1.03
NPLOC4-213ENST00000573519 CIDEAO60543 219 aa8.63□□□□□ -1.03
NPLOC4-213ENST00000573519 CRYGDP07320 174 aa8.63□□□□□ -1.03
NPLOC4-213ENST00000573519 KRTAP10-2P60368 255 aa8.63□□□□□ -1.03
NPLOC4-213ENST00000573519 ERVFC1-1P60608 527 aa8.63□□□□□ -1.03
NPLOC4-213ENST00000573519 ZNF674Q2M3X9 581 aa8.63□□□□□ -1.03
NPLOC4-213ENST00000573519 MSRB1Q9NZV6 116 aa8.63□□□□□ -1.03
NPLOC4-213ENST00000573519 TRAV8-6A0A0B4J262 113 aa8.62□□□□□ -1.03
NPLOC4-213ENST00000573519 DNAH10OSP0CZ25 163 aa8.62□□□□□ -1.03
NPLOC4-213ENST00000573519 MGST1P10620 155 aaKnown RBP8.62□□□□□ -1.03
NPLOC4-213ENST00000573519 OR10J3Q5JRS4 329 aa8.62□□□□□ -1.03
NPLOC4-213ENST00000573519 BAGE2Q86Y30 109 aa8.62□□□□□ -1.03
NPLOC4-213ENST00000573519 PTH2Q96A98 100 aa8.62□□□□□ -1.03
NPLOC4-213ENST00000573519 MANBALQ9NQG1 85 aa8.62□□□□□ -1.03
NPLOC4-213ENST00000573519 IGHV3-38A0A0C4DH36 116 aa8.61□□□□□ -1.03
NPLOC4-213ENST00000573519 A8MWV9 139 aa8.61□□□□□ -1.03
NPLOC4-213ENST00000573519 K7EP13 123 aa8.61□□□□□ -1.03
NPLOC4-213ENST00000573519 S100A9P06702 114 aaKnown RBP8.61□□□□□ -1.03
NPLOC4-213ENST00000573519 ARMS2P0C7Q2 107 aa8.61□□□□□ -1.03
NPLOC4-213ENST00000573519 NKX2-5P52952 324 aaPredicted RBP8.61□□□□□ -1.03
NPLOC4-213ENST00000573519 DERL1Q9BUN8 251 aa8.61□□□□□ -1.03
NPLOC4-213ENST00000573519 PARLQ9H300 379 aa8.61□□□□□ -1.03
NPLOC4-213ENST00000573519 JPT2Q9H910 190 aa8.61□□□□□ -1.03
NPLOC4-213ENST00000573519 IL36BQ9NZH7 164 aa8.61□□□□□ -1.03
NPLOC4-213ENST00000573519 PCLOQ9Y6V0 5065 aa8.61□□□□□ -1.03
NPLOC4-213ENST00000573519 TEX46H3BTG2 121 aa8.6□□□□□ -1.03
NPLOC4-213ENST00000573519 CDK2AP2O75956 126 aa8.6□□□□□ -1.03
NPLOC4-213ENST00000573519 FUSP35637 526 aaKnown RBP eCLIP8.6□□□□□ -1.03
NPLOC4-213ENST00000573519 RPL35P42766 123 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-213ENST00000573519 TIRAPP58753 221 aa8.6□□□□□ -1.03
NPLOC4-213ENST00000573519 RPL19P84098 196 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-213ENST00000573519 LINC01559Q495D7 138 aa8.6□□□□□ -1.03
NPLOC4-213ENST00000573519 DMRTA1Q5VZB9 504 aa8.6□□□□□ -1.03
NPLOC4-213ENST00000573519 Q6ZSN1 163 aa8.6□□□□□ -1.03
NPLOC4-213ENST00000573519 C10orf126Q8N4M7 172 aa8.6□□□□□ -1.03
NPLOC4-213ENST00000573519 MAPKAPK5-AS1Q8N8E1 139 aa8.6□□□□□ -1.03
NPLOC4-213ENST00000573519 SYT8Q8NBV8 401 aa8.6□□□□□ -1.03
NPLOC4-213ENST00000573519 ATP6V0E2Q8NHE4 81 aa8.6□□□□□ -1.03
NPLOC4-213ENST00000573519 GAGE12JA6NER3 117 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 IGHV3-30P01768 117 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 IGHV3-33P01772 117 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 IGHV3-30-3P0DP02 117 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 IGHV3-30-5P0DP03 117 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 GAGE1Q13065 139 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 GAGE4Q13068 117 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 GAGE5Q13069 117 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms