RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 PSCAO43653 123 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 IGLV2-11P01706 119 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 ASIPP42127 132 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 KRTAP10-2P60368 255 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 RGS21Q2M5E4 152 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 LINC01556Q5JQF7 62 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 CFAP126Q5VTH2 177 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 RPL7L1Q6DKI1 246 aaKnown RBP6.62□□□□□ -1.35
CIITA-207ENST00000571545 ZFP2Q6ZN57 461 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 SYT8Q8NBV8 401 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 STOML3Q8TAV4 291 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 SGK494Q96LW2 274 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 ARL2-SNX15V9GYD0 113 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 FABP5P3A8MUU1 101 aa6.61□□□□□ -1.35
CIITA-207ENST00000571545 RHODO00212 210 aa6.61□□□□□ -1.35
CIITA-207ENST00000571545 PEX7O00628 323 aa6.61□□□□□ -1.35
CIITA-207ENST00000571545 LAGE3Q14657 143 aa6.61□□□□□ -1.35
CIITA-207ENST00000571545 OR10J3Q5JRS4 329 aa6.61□□□□□ -1.35
CIITA-207ENST00000571545 ZNF506Q5JVG8 444 aa6.61□□□□□ -1.35
CIITA-207ENST00000571545 LELP1Q5T871 98 aa6.61□□□□□ -1.35
CIITA-207ENST00000571545 SLC25A29Q8N8R3 303 aa6.61□□□□□ -1.35
CIITA-207ENST00000571545 FMC1Q96HJ9 113 aa6.61□□□□□ -1.35
CIITA-207ENST00000571545 ZFP30Q9Y2G7 519 aa6.61□□□□□ -1.35
CIITA-207ENST00000571545 PKD1P98161 4303 aa6.61□□□□□ -1.35
CIITA-207ENST00000571545 A0A087WTM6 91 aa6.6□□□□□ -1.35
CIITA-207ENST00000571545 SEC11BP0C7V7 166 aa6.6□□□□□ -1.35
CIITA-207ENST00000571545 FHITP49789 147 aa6.6□□□□□ -1.35
CIITA-207ENST00000571545 ZNF80P51504 273 aaPredicted RBP6.6□□□□□ -1.35
CIITA-207ENST00000571545 FGF8P55075 233 aaPredicted RBP6.6□□□□□ -1.35
CIITA-207ENST00000571545 UBE2G1P62253 170 aa6.6□□□□□ -1.35
CIITA-207ENST00000571545 TOR2AQ5JU69 321 aa6.6□□□□□ -1.35
CIITA-207ENST00000571545 Q86TA4 180 aa6.6□□□□□ -1.35
CIITA-207ENST00000571545 ATP6V0E2Q8NHE4 81 aa6.6□□□□□ -1.35
CIITA-207ENST00000571545 NTN5Q8WTR8 489 aaPredicted RBP6.6□□□□□ -1.35
CIITA-207ENST00000571545 GTSF1LQ9H1H1 148 aa6.6□□□□□ -1.35
CIITA-207ENST00000571545 IL36BQ9NZH7 164 aa6.6□□□□□ -1.35
CIITA-207ENST00000571545 A0A087WWC5 75 aa6.59□□□□□ -1.35
CIITA-207ENST00000571545 LOC100131303A0A0U1RQF7 123 aa6.59□□□□□ -1.35
CIITA-207ENST00000571545 MAP1LC3B2A6NCE7 125 aa6.59□□□□□ -1.35
CIITA-207ENST00000571545 PGPEP1LA6NFU8 196 aa6.59□□□□□ -1.35
CIITA-207ENST00000571545 FAM74A7A6NL05 159 aa6.59□□□□□ -1.35
CIITA-207ENST00000571545 B4DEV8 164 aa6.59□□□□□ -1.35
CIITA-207ENST00000571545 ARPC5O15511 151 aa6.59□□□□□ -1.35
CIITA-207ENST00000571545 RNASE3P12724 160 aaKnown RBP6.59□□□□□ -1.35
CIITA-207ENST00000571545 UBE2G2P60604 165 aa6.59□□□□□ -1.35
CIITA-207ENST00000571545 LGALSLQ3ZCW2 172 aaPredicted RBP6.59□□□□□ -1.35
CIITA-207ENST00000571545 MAP1LC3BQ9GZQ8 125 aa6.59□□□□□ -1.35
CIITA-207ENST00000571545 SCRT2Q9NQ03 307 aa6.59□□□□□ -1.35
CIITA-207ENST00000571545 C11orf21Q9P2W6 132 aa6.59□□□□□ -1.35
CIITA-207ENST00000571545 IBA57-AS1B1ANH7 110 aa6.58□□□□□ -1.36
CIITA-207ENST00000571545 S100A9P06702 114 aaKnown RBP6.58□□□□□ -1.36
CIITA-207ENST00000571545 ZNF345Q14585 488 aa6.58□□□□□ -1.36
CIITA-207ENST00000571545 ZNF726P1Q15940 193 aa6.58□□□□□ -1.36
CIITA-207ENST00000571545 Q5BKY6 102 aa6.58□□□□□ -1.36
CIITA-207ENST00000571545 DNLZQ5SXM8 178 aa6.58□□□□□ -1.36
CIITA-207ENST00000571545 FAM162BQ5T6X4 162 aa6.58□□□□□ -1.36
CIITA-207ENST00000571545 COX8CQ7Z4L0 72 aa6.58□□□□□ -1.36
CIITA-207ENST00000571545 OR11H4Q8NGC9 324 aa6.58□□□□□ -1.36
CIITA-207ENST00000571545 TM2D2Q9BX73 214 aa6.58□□□□□ -1.36
CIITA-207ENST00000571545 PARLQ9H300 379 aa6.58□□□□□ -1.36
CIITA-207ENST00000571545 DNAH11Q96DT5 4516 aa6.57□□□□□ -1.36
CIITA-207ENST00000571545 IGHV3-73A0A0B4J1V6 119 aa6.57□□□□□ -1.36
CIITA-207ENST00000571545 TRAV34A0A0B4J273 112 aa6.57□□□□□ -1.36
CIITA-207ENST00000571545 IGKV3D-20A0A0C4DH25 116 aa6.57□□□□□ -1.36
CIITA-207ENST00000571545 TRBV6-1A0A0K0K1D8 114 aa6.57□□□□□ -1.36
CIITA-207ENST00000571545 UMAD1C9J7I0 102 aa6.57□□□□□ -1.36
CIITA-207ENST00000571545 TPT1P13693 172 aaKnown RBP6.57□□□□□ -1.36
CIITA-207ENST00000571545 AKR1C3P42330 323 aa6.57□□□□□ -1.36
CIITA-207ENST00000571545 EIF5AP63241 154 aaKnown RBP6.57□□□□□ -1.36
CIITA-207ENST00000571545 DPPA3Q6W0C5 159 aa6.57□□□□□ -1.36
CIITA-207ENST00000571545 COX11Q9Y6N1 276 aa6.57□□□□□ -1.36
CIITA-207ENST00000571545 RYR1P21817 5038 aa6.57□□□□□ -1.36
CIITA-207ENST00000571545 TRAV8-3A0A0A6YYJ7 113 aa6.56□□□□□ -1.36
CIITA-207ENST00000571545 EPM2AB3EWF7 344 aa6.56□□□□□ -1.36
CIITA-207ENST00000571545 H3BVH4 76 aa6.56□□□□□ -1.36
CIITA-207ENST00000571545 PFDN1O60925 122 aa6.56□□□□□ -1.36
CIITA-207ENST00000571545 LTAP01374 205 aa6.56□□□□□ -1.36
CIITA-207ENST00000571545 GCSHP23434 173 aa6.56□□□□□ -1.36
CIITA-207ENST00000571545 CST9LP1Q5W188 147 aa6.56□□□□□ -1.36
CIITA-207ENST00000571545 ZFP82Q8N141 532 aa6.56□□□□□ -1.36
CIITA-207ENST00000571545 FRZBQ92765 325 aa6.56□□□□□ -1.36
CIITA-207ENST00000571545 RMI2Q96E14 147 aa6.56□□□□□ -1.36
CIITA-207ENST00000571545 LINC00479Q96M42 142 aa6.56□□□□□ -1.36
CIITA-207ENST00000571545 PHLDA3Q9Y5J5 127 aa6.56□□□□□ -1.36
CIITA-207ENST00000571545 TNFRSF18Q9Y5U5 241 aa6.56□□□□□ -1.36
CIITA-207ENST00000571545 URGCP-MRPS24S4R325 110 aa6.56□□□□□ -1.36
CIITA-207ENST00000571545 IGLV5-52A0A0A0MRZ9 124 aa6.55□□□□□ -1.36
CIITA-207ENST00000571545 A0A0D9SG52 128 aa6.55□□□□□ -1.36
CIITA-207ENST00000571545 TRBV10-1A0A0K0K1A3 114 aa6.55□□□□□ -1.36
CIITA-207ENST00000571545 KRBOX1C9JBD0 128 aa6.55□□□□□ -1.36
CIITA-207ENST00000571545 SH2D1AO60880 128 aa6.55□□□□□ -1.36
CIITA-207ENST00000571545 LINC00694P0DN24 101 aa6.55□□□□□ -1.36
CIITA-207ENST00000571545 ZNF674Q2M3X9 581 aa6.55□□□□□ -1.36
CIITA-207ENST00000571545 KCNIP4Q6PIL6 250 aa6.55□□□□□ -1.36
CIITA-207ENST00000571545 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.55□□□□□ -1.36
CIITA-207ENST00000571545 ZC2HC1AQ96GY0 325 aa6.55□□□□□ -1.36
CIITA-207ENST00000571545 TMEM70Q9BUB7 260 aa6.55□□□□□ -1.36
CIITA-207ENST00000571545 CHCHD7Q9BUK0 85 aa6.55□□□□□ -1.36
CIITA-207ENST00000571545 KRTAP4-5Q9BYR2 181 aa6.55□□□□□ -1.36
CIITA-207ENST00000571545 Q9HAA7 133 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms