RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 C3orf56Q8N813 242 aa14.8□□□□□ -0.04
SPNS2-203ENST00000570979 RNF152Q8N8N0 203 aa14.8□□□□□ -0.04
SPNS2-203ENST00000570979 IGHV4-4A0A075B6R2 117 aa14.79□□□□□ -0.04
SPNS2-203ENST00000570979 D6R8Y8 96 aa14.79□□□□□ -0.04
SPNS2-203ENST00000570979 TM4SF20Q53R12 229 aa14.79□□□□□ -0.04
SPNS2-203ENST00000570979 Q6ZVH6 145 aa14.79□□□□□ -0.04
SPNS2-203ENST00000570979 OR8A1Q8NGG7 326 aa14.79□□□□□ -0.04
SPNS2-203ENST00000570979 MS4A6AQ9H2W1 248 aa14.79□□□□□ -0.04
SPNS2-203ENST00000570979 RNASE1P07998 156 aaKnown RBP14.78□□□□□ -0.04
SPNS2-203ENST00000570979 SMIM17P0DL12 118 aa14.78□□□□□ -0.04
SPNS2-203ENST00000570979 MED14OSP0DP75 135 aa14.78□□□□□ -0.04
SPNS2-203ENST00000570979 AMN1Q8IY45 258 aa14.78□□□□□ -0.04
SPNS2-203ENST00000570979 MYOZ3Q8TDC0 251 aa14.78□□□□□ -0.04
SPNS2-203ENST00000570979 IGKV3D-20A0A0C4DH25 116 aa14.78□□□□□ -0.04
SPNS2-203ENST00000570979 SEC11AP67812 179 aa14.78□□□□□ -0.04
SPNS2-203ENST00000570979 EBLN2Q6P2I7 272 aa14.78□□□□□ -0.04
SPNS2-203ENST00000570979 SLC25A34Q6PIV7 304 aa14.78□□□□□ -0.04
SPNS2-203ENST00000570979 GTF2H5Q6ZYL4 71 aa14.78□□□□□ -0.04
SPNS2-203ENST00000570979 APRG1Q8IVJ8 170 aa14.78□□□□□ -0.04
SPNS2-203ENST00000570979 Q8N2B8 174 aa14.78□□□□□ -0.04
SPNS2-203ENST00000570979 C20orf173Q96LM9 149 aa14.78□□□□□ -0.04
SPNS2-203ENST00000570979 G3V4G9 280 aa14.77□□□□□ -0.05
SPNS2-203ENST00000570979 HOXA3O43365 443 aaPredicted RBP14.77□□□□□ -0.05
SPNS2-203ENST00000570979 SNAI2O43623 268 aa14.77□□□□□ -0.05
SPNS2-203ENST00000570979 PRB4P10163 310 aaPredicted RBP14.77□□□□□ -0.05
SPNS2-203ENST00000570979 ZNF702PQ9H963 129 aa14.77□□□□□ -0.05
SPNS2-203ENST00000570979 SYS1-DBNDD2H3BUS1 97 aa14.76□□□□□ -0.05
SPNS2-203ENST00000570979 CSN3P07498 182 aa14.76□□□□□ -0.05
SPNS2-203ENST00000570979 MAP1LC3AQ9H492 121 aa14.76□□□□□ -0.05
SPNS2-203ENST00000570979 SNRPD3P62318 126 aaKnown RBP14.75□□□□□ -0.05
SPNS2-203ENST00000570979 MPV17L2Q567V2 206 aa14.75□□□□□ -0.05
SPNS2-203ENST00000570979 SPATA12Q7Z6I5 190 aa14.75□□□□□ -0.05
SPNS2-203ENST00000570979 FAM19A4Q96LR4 140 aa14.75□□□□□ -0.05
SPNS2-203ENST00000570979 ODF3Q96PU9 254 aa14.75□□□□□ -0.05
SPNS2-203ENST00000570979 NXT2Q9NPJ8 142 aaKnown RBP14.75□□□□□ -0.05
SPNS2-203ENST00000570979 MAJINQ3KP22 176 aa14.75□□□□□ -0.05
SPNS2-203ENST00000570979 AMMECR1LQ6DCA0 310 aa14.75□□□□□ -0.05
SPNS2-203ENST00000570979 UFSP1Q6NVU6 142 aa14.75□□□□□ -0.05
SPNS2-203ENST00000570979 LCNL1Q6ZST4 164 aa14.75□□□□□ -0.05
SPNS2-203ENST00000570979 ZNF575Q86XF7 245 aa14.75□□□□□ -0.05
SPNS2-203ENST00000570979 TMEM95Q3KNT9 176 aa14.74□□□□□ -0.05
SPNS2-203ENST00000570979 SPANXN1Q5VSR9 72 aa14.74□□□□□ -0.05
SPNS2-203ENST00000570979 ZFAND2AQ8N6M9 145 aa14.74□□□□□ -0.05
SPNS2-203ENST00000570979 SIGLEC8Q9NYZ4 499 aa14.74□□□□□ -0.05
SPNS2-203ENST00000570979 NUDT3O95989 172 aa14.73□□□□□ -0.05
SPNS2-203ENST00000570979 ASIPP42127 132 aa14.73□□□□□ -0.05
SPNS2-203ENST00000570979 ZNF747Q9BV97 191 aa14.73□□□□□ -0.05
SPNS2-203ENST00000570979 S100A4P26447 101 aaKnown RBP14.72□□□□□ -0.05
SPNS2-203ENST00000570979 IFI27P40305 119 aaPredicted RBP14.72□□□□□ -0.05
SPNS2-203ENST00000570979 LEPP41159 167 aa14.72□□□□□ -0.05
SPNS2-203ENST00000570979 DCANP1Q8TF63 244 aa14.72□□□□□ -0.05
SPNS2-203ENST00000570979 WFDC12Q8WWY7 111 aa14.72□□□□□ -0.05
SPNS2-203ENST00000570979 DPF1Q92782 380 aa14.71□□□□□ -0.05
SPNS2-203ENST00000570979 C11orf21Q9P2W6 132 aa14.71□□□□□ -0.05
SPNS2-203ENST00000570979 LINC01546A6NGU7 62 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 OR4C46A6NHA9 309 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 HBDP02042 147 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 NEGR1Q7Z3B1 354 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 ATOH7Q8N100 152 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 MRAP2Q96G30 205 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 RNF185Q96GF1 192 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 SCRT2Q9NQ03 307 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 MUC21A0A0G2JKD1 596 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 MUC21A0A140T8X8 626 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 PRSS47A8MTI9 375 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 DUSP14O95147 198 aaKnown RBP14.7□□□□□ -0.06
SPNS2-203ENST00000570979 PPP1R17O96001 155 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 PSMG4Q5JS54 123 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 MUC21Q5SSG8 566 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 OR5A1Q8NGJ0 315 aa14.7□□□□□ -0.06
SPNS2-203ENST00000570979 TRRAPQ9Y4A5 3859 aa14.68□□□□□ -0.06
SPNS2-203ENST00000570979 LOC389332A0A1B0GUA5 103 aa14.68□□□□□ -0.06
SPNS2-203ENST00000570979 TNFRSF6BO95407 300 aa14.68□□□□□ -0.06
SPNS2-203ENST00000570979 RNASE4P34096 147 aaKnown RBP14.68□□□□□ -0.06
SPNS2-203ENST00000570979 PRR31Q5SQ13 230 aa14.68□□□□□ -0.06
SPNS2-203ENST00000570979 PEMTQ9UBM1 199 aa14.68□□□□□ -0.06
SPNS2-203ENST00000570979 GAGE10A6NGK3 116 aa14.68□□□□□ -0.06
SPNS2-203ENST00000570979 KLLNB2CW77 178 aa14.68□□□□□ -0.06
SPNS2-203ENST00000570979 NPYP01303 97 aa14.68□□□□□ -0.06
SPNS2-203ENST00000570979 LINC01545Q5VT33 79 aa14.68□□□□□ -0.06
SPNS2-203ENST00000570979 MSRB1Q9NZV6 116 aa14.68□□□□□ -0.06
SPNS2-203ENST00000570979 PHLDA3Q9Y5J5 127 aa14.68□□□□□ -0.06
SPNS2-203ENST00000570979 TRAV2A0A0B4J234 112 aa14.67□□□□□ -0.06
SPNS2-203ENST00000570979 H3BRM9 83 aa14.67□□□□□ -0.06
SPNS2-203ENST00000570979 SHISA2Q6UWI4 295 aa14.67□□□□□ -0.06
SPNS2-203ENST00000570979 IGKV3-7A0A075B6H7 116 aa14.66□□□□□ -0.06
SPNS2-203ENST00000570979 TRAV8-6A0A0B4J262 113 aa14.66□□□□□ -0.06
SPNS2-203ENST00000570979 A0A1B0GV72 72 aa14.66□□□□□ -0.06
SPNS2-203ENST00000570979 K7EQG2 157 aa14.66□□□□□ -0.06
SPNS2-203ENST00000570979 HOXD3P31249 432 aaPredicted RBP14.66□□□□□ -0.06
SPNS2-203ENST00000570979 FAM159AQ6UWV7 190 aa14.66□□□□□ -0.06
SPNS2-203ENST00000570979 Q8N8P6 123 aa14.66□□□□□ -0.06
SPNS2-203ENST00000570979 MGAM2Q2M2H8 2515 aa14.66□□□□□ -0.06
SPNS2-203ENST00000570979 IGHV4OR15-8A0A075B7B6 117 aa14.65□□□□□ -0.06
SPNS2-203ENST00000570979 A0A087WW49 117 aa14.65□□□□□ -0.06
SPNS2-203ENST00000570979 H3BVH4 76 aa14.65□□□□□ -0.06
SPNS2-203ENST00000570979 K7EMI3 77 aa14.65□□□□□ -0.06
SPNS2-203ENST00000570979 K7EP34 96 aa14.65□□□□□ -0.06
SPNS2-203ENST00000570979 SYNJ2BPP57105 145 aa14.65□□□□□ -0.06
SPNS2-203ENST00000570979 OR2K2Q8NGT1 345 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms