RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	CCL20	P78556	96 aa		12.56	□□□□□ -0.4
PKD1-238	ENST00000570150	ALKAL2	Q6UX46	152 aa		12.56	□□□□□ -0.4
PKD1-238	ENST00000570150	ZFP2	Q6ZN57	461 aa		12.56	□□□□□ -0.4
PKD1-238	ENST00000570150	MED9	Q9NWA0	146 aa		12.56	□□□□□ -0.4
PKD1-238	ENST00000570150	C11orf21	Q9P2W6	132 aa		12.56	□□□□□ -0.4
PKD1-238	ENST00000570150	PHLDA3	Q9Y5J5	127 aa		12.56	□□□□□ -0.4
PKD1-238	ENST00000570150	KMT2A	Q03164	3969 aa		12.55	□□□□□ -0.4
PKD1-238	ENST00000570150	IGKV3D-20	A0A0C4DH25	116 aa		12.55	□□□□□ -0.4
PKD1-238	ENST00000570150		A0A1B0GVG6	124 aa		12.55	□□□□□ -0.4
PKD1-238	ENST00000570150	RHOD	O00212	210 aa		12.55	□□□□□ -0.4
PKD1-238	ENST00000570150	MGST1	P10620	155 aa	Known RBP	12.55	□□□□□ -0.4
PKD1-238	ENST00000570150	FHL2	Q14192	279 aa		12.55	□□□□□ -0.4
PKD1-238	ENST00000570150	PRADC1	Q9BSG0	188 aa		12.55	□□□□□ -0.4
PKD1-238	ENST00000570150	TMEM250	H0YL14	139 aa		12.54	□□□□□ -0.4
PKD1-238	ENST00000570150	IGHV3-53	P01767	116 aa		12.54	□□□□□ -0.4
PKD1-238	ENST00000570150	RNASE3	P12724	160 aa	Known RBP	12.54	□□□□□ -0.4
PKD1-238	ENST00000570150	SRI	P30626	198 aa		12.54	□□□□□ -0.4
PKD1-238	ENST00000570150	RPS20	P60866	119 aa	Known RBP	12.54	□□□□□ -0.4
PKD1-238	ENST00000570150	TTC32	Q5I0X7	151 aa		12.54	□□□□□ -0.4
PKD1-238	ENST00000570150	NEGR1	Q7Z3B1	354 aa		12.54	□□□□□ -0.4
PKD1-238	ENST00000570150	ZFP82	Q8N141	532 aa		12.54	□□□□□ -0.4
PKD1-238	ENST00000570150	LYPD6B	Q8NI32	183 aa		12.54	□□□□□ -0.4
PKD1-238	ENST00000570150	UPK3B	Q9BT76	320 aa		12.54	□□□□□ -0.4
PKD1-238	ENST00000570150	TRBV6-4	A0A1B0GX49	114 aa		12.53	□□□□□ -0.4
PKD1-238	ENST00000570150	BTF3	P20290	206 aa	Known RBP	12.53	□□□□□ -0.4
PKD1-238	ENST00000570150	CRIP1	P50238	77 aa		12.53	□□□□□ -0.4
PKD1-238	ENST00000570150	LINC00336	Q6ZUF6	198 aa		12.53	□□□□□ -0.4
PKD1-238	ENST00000570150	VSIG2	Q96IQ7	327 aa		12.53	□□□□□ -0.4
PKD1-238	ENST00000570150	ZNF479	Q96JC4	524 aa		12.53	□□□□□ -0.4
PKD1-238	ENST00000570150	RBFOX3	A6NFN3	312 aa		12.52	□□□□□ -0.41
PKD1-238	ENST00000570150		K7EP13	123 aa		12.52	□□□□□ -0.41
PKD1-238	ENST00000570150		M0R036	132 aa		12.52	□□□□□ -0.41
PKD1-238	ENST00000570150	RS1	O15537	224 aa		12.52	□□□□□ -0.41
PKD1-238	ENST00000570150	RHOH	Q15669	191 aa		12.52	□□□□□ -0.41
PKD1-238	ENST00000570150	CENPW	Q5EE01	88 aa		12.52	□□□□□ -0.41
PKD1-238	ENST00000570150	ZNF506	Q5JVG8	444 aa		12.52	□□□□□ -0.41
PKD1-238	ENST00000570150	CFAP126	Q5VTH2	177 aa		12.52	□□□□□ -0.41
PKD1-238	ENST00000570150	MRPS16	Q9Y3D3	137 aa	Known RBP	12.52	□□□□□ -0.41
PKD1-238	ENST00000570150		A0A096LPF7	62 aa		12.51	□□□□□ -0.41
PKD1-238	ENST00000570150	ARMS2	P0C7Q2	107 aa		12.51	□□□□□ -0.41
PKD1-238	ENST00000570150		A0A1W2PPQ1	181 aa		12.5	□□□□□ -0.41
PKD1-238	ENST00000570150		H3BVH4	76 aa		12.5	□□□□□ -0.41
PKD1-238	ENST00000570150	SFTA3	P0C7M3	94 aa		12.5	□□□□□ -0.41
PKD1-238	ENST00000570150	GATA1	P15976	413 aa	Predicted RBP	12.5	□□□□□ -0.41
PKD1-238	ENST00000570150	NKX2-5	P52952	324 aa	Predicted RBP	12.5	□□□□□ -0.41
PKD1-238	ENST00000570150	NHLRC2	Q8NBF2	726 aa		12.5	□□□□□ -0.41
PKD1-238	ENST00000570150	SCRT2	Q9NQ03	307 aa		12.5	□□□□□ -0.41
PKD1-238	ENST00000570150	LINC00588	Q9Y4M8	146 aa		12.5	□□□□□ -0.41
PKD1-238	ENST00000570150	GYPE	P15421	78 aa		12.49	□□□□□ -0.41
PKD1-238	ENST00000570150	PRR27	Q6MZM9	219 aa		12.49	□□□□□ -0.41
PKD1-238	ENST00000570150	EIF5A2	Q9GZV4	153 aa	Known RBP	12.49	□□□□□ -0.41
PKD1-238	ENST00000570150	PGPEP1L	A6NFU8	196 aa		12.48	□□□□□ -0.41
PKD1-238	ENST00000570150		P01737	135 aa		12.48	□□□□□ -0.41
PKD1-238	ENST00000570150	OR5AL1	P0C617	328 aa		12.48	□□□□□ -0.41
PKD1-238	ENST00000570150	TIRAP	P58753	221 aa		12.48	□□□□□ -0.41
PKD1-238	ENST00000570150	ZNRF2	Q8NHG8	242 aa		12.48	□□□□□ -0.41
PKD1-238	ENST00000570150		Q9H8V8	135 aa		12.48	□□□□□ -0.41
PKD1-238	ENST00000570150	MUC4	Q99102	2169 aa		12.47	□□□□□ -0.41
PKD1-238	ENST00000570150	TRAV9-2	A0A087WT02	112 aa		12.47	□□□□□ -0.41
PKD1-238	ENST00000570150		K7EQD1	137 aa		12.47	□□□□□ -0.41
PKD1-238	ENST00000570150	ESRG	Q1W209	222 aa		12.47	□□□□□ -0.41
PKD1-238	ENST00000570150	DERL1	Q9BUN8	251 aa		12.47	□□□□□ -0.41
PKD1-238	ENST00000570150	SMDT1	Q9H4I9	107 aa		12.47	□□□□□ -0.41
PKD1-238	ENST00000570150	TMSB15B	A0A087X1C1	80 aa		12.46	□□□□□ -0.41
PKD1-238	ENST00000570150	NBDY	A0A0U1RRE5	68 aa		12.46	□□□□□ -0.41
PKD1-238	ENST00000570150	GRIFIN	A4D1Z8	144 aa		12.46	□□□□□ -0.41
PKD1-238	ENST00000570150		F2Z2F3	143 aa		12.46	□□□□□ -0.41
PKD1-238	ENST00000570150	SPANXN1	Q5VSR9	72 aa		12.46	□□□□□ -0.41
PKD1-238	ENST00000570150	TEX261	Q6UWH6	196 aa		12.46	□□□□□ -0.41
PKD1-238	ENST00000570150	SFRP2	Q96HF1	295 aa		12.46	□□□□□ -0.41
PKD1-238	ENST00000570150	PARL	Q9H300	379 aa		12.46	□□□□□ -0.41
PKD1-238	ENST00000570150	LY96	Q9Y6Y9	160 aa		12.46	□□□□□ -0.41
PKD1-238	ENST00000570150	C1orf134	Q5TEV5	83 aa		12.45	□□□□□ -0.42
PKD1-238	ENST00000570150		Q6ZR54	194 aa		12.45	□□□□□ -0.42
PKD1-238	ENST00000570150	SLC25A29	Q8N8R3	303 aa		12.45	□□□□□ -0.42
PKD1-238	ENST00000570150	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	12.45	□□□□□ -0.42
PKD1-238	ENST00000570150	FAM210A	Q96ND0	272 aa		12.45	□□□□□ -0.42
PKD1-238	ENST00000570150	SSBP4	Q9BWG4	385 aa	Predicted RBP	12.45	□□□□□ -0.42
PKD1-238	ENST00000570150		M0R381	172 aa		12.44	□□□□□ -0.42
PKD1-238	ENST00000570150	SNAI2	O43623	268 aa		12.44	□□□□□ -0.42
PKD1-238	ENST00000570150	DMRTA1	Q5VZB9	504 aa		12.44	□□□□□ -0.42
PKD1-238	ENST00000570150	LYPD5	Q6UWN5	251 aa		12.44	□□□□□ -0.42
PKD1-238	ENST00000570150	VPS13D	Q5THJ4	4388 aa		12.43	□□□□□ -0.42
PKD1-238	ENST00000570150	IGLV2-18	A0A075B6J9	118 aa		12.43	□□□□□ -0.42
PKD1-238	ENST00000570150	RAB19	A4D1S5	217 aa		12.43	□□□□□ -0.42
PKD1-238	ENST00000570150	SIVA1	O15304	175 aa		12.43	□□□□□ -0.42
PKD1-238	ENST00000570150	NXPH4	O95158	308 aa		12.43	□□□□□ -0.42
PKD1-238	ENST00000570150	SMIM17	P0DL12	118 aa		12.43	□□□□□ -0.42
PKD1-238	ENST00000570150	CACNG7	P62955	275 aa		12.43	□□□□□ -0.42
PKD1-238	ENST00000570150	FAM74A3	Q4VXF1	159 aa		12.43	□□□□□ -0.42
PKD1-238	ENST00000570150	OR2D3	Q8NGH3	330 aa		12.43	□□□□□ -0.42
PKD1-238	ENST00000570150	FRAS1	Q86XX4	4008 aa		12.43	□□□□□ -0.42
PKD1-238	ENST00000570150		A0A087WWC5	75 aa		12.42	□□□□□ -0.42
PKD1-238	ENST00000570150	TRBV10-1	A0A0K0K1A3	114 aa		12.42	□□□□□ -0.42
PKD1-238	ENST00000570150	C19orf71	A6NCJ1	209 aa		12.42	□□□□□ -0.42
PKD1-238	ENST00000570150	TOR2A	Q5JU69	321 aa		12.42	□□□□□ -0.42
PKD1-238	ENST00000570150	AP1S3	Q96PC3	154 aa		12.42	□□□□□ -0.42
PKD1-238	ENST00000570150	TRAV8-6	A0A0B4J262	113 aa		12.41	□□□□□ -0.42
PKD1-238	ENST00000570150		M0R2N4	97 aa		12.41	□□□□□ -0.42
PKD1-238	ENST00000570150	IGLV2-8	P01709	118 aa		12.41	□□□□□ -0.42

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