RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SSBP1Q04837 148 aaKnown RBP5.12□□□□□ -1.59
SMG1-217ENST00000569764 GAGE13Q4V321 117 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 TMEM256Q8N2U0 113 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 CHCHD5Q9BSY4 110 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 IGKV1-6A0A0C4DH72 117 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 EIF4EBP3O60516 100 aaPredicted RBP5.12□□□□□ -1.59
SMG1-217ENST00000569764 IGHV4-38-2P0DP08 117 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 PYYP10082 97 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 CCL3L1P16619 93 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 NPPCP23582 126 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 BEAN1Q3B7T3 259 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 SCGB1D4Q6XE38 83 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 MDFICQ9P1T7 246 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 ANKRD17O75179 2603 aaKnown RBP5.12□□□□□ -1.59
SMG1-217ENST00000569764 A0A1W2PPM0 123 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 H0YIZ8 118 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 CLEC19AQ6UXS0 136 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 Q6ZR03 302 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 LINC01006Q8NI28 216 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 MRPL32Q9BYC8 188 aaKnown RBP5.12□□□□□ -1.59
SMG1-217ENST00000569764 EPDR1Q9UM22 224 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 TRRAPQ9Y4A5 3859 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 TRAV1-1A0A0B4J248 108 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 FAM229AH3BQW9 127 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 PRB4P10163 310 aaPredicted RBP5.12□□□□□ -1.59
SMG1-217ENST00000569764 WFDC2Q14508 124 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 ZC2HC1BQ5TFG8 222 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 ZNF706Q9Y5V0 76 aaPredicted RBP5.12□□□□□ -1.59
SMG1-217ENST00000569764 ANK3Q12955 4377 aaKnown RBP5.11□□□□□ -1.59
SMG1-217ENST00000569764 CMYA5Q8N3K9 4069 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 TRBV7-1A0A0A6YYK4 115 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 UQCRQO14949 82 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 PLXNB1O43157 2135 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 C11orf53Q8IXP5 236 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 IGSF10Q6WRI0 2623 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 IGKV1D-13A0A0B4J2D9 117 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 IGKV1-13P0DP09 117 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 DAD1P61803 113 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 Q6Q795 121 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 LYPD2Q6UXB3 125 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 Q6ZSV7 163 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 UBALD1Q8TB05 177 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 TMEM242Q9NWH2 141 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 RAI1Q7Z5J4 1906 aaPredicted RBP5.11□□□□□ -1.59
SMG1-217ENST00000569764 MRPS12O15235 138 aaKnown RBP5.11□□□□□ -1.59
SMG1-217ENST00000569764 TMEM258P61165 79 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 IGFBPL1Q8WX77 278 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 VGLL1Q99990 258 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 RNF126Q9BV68 326 aa5.11□□□□□ -1.59
SMG1-217ENST00000569764 TRAV8-3A0A0A6YYJ7 113 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 PIK3CD-AS1Q5SR53 167 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 DSCAML1Q8TD84 2053 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 IGHV3-43A0A0B4J1X8 118 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 IGHV1-3A0A0C4DH29 117 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 FAM24AA6NFZ4 105 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 ZFP92A6NM28 416 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 IGHV3-43DP0DP04 118 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 TMEM136Q6ZRR5 245 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 PRNTQ86SH4 94 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 LSM10Q969L4 123 aaKnown RBP5.1□□□□□ -1.59
SMG1-217ENST00000569764 RBAKDNA6NC62 111 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 SYNGR2O43760 224 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 SMIM13P0DJ93 91 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 NMUP48645 174 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 Q6ZS46 218 aa5.1□□□□□ -1.59
SMG1-217ENST00000569764 CYB561D1Q8N8Q1 229 aa5.09□□□□□ -1.59
SMG1-217ENST00000569764 A6NDX4 124 aa5.09□□□□□ -1.59
SMG1-217ENST00000569764 Q6P435 159 aa5.09□□□□□ -1.59
SMG1-217ENST00000569764 OR51H1Q8NH63 302 aa5.09□□□□□ -1.59
SMG1-217ENST00000569764 CHD6Q8TD26 2715 aa5.09□□□□□ -1.59
SMG1-217ENST00000569764 IGHV3-72A0A0B4J1Y9 119 aa5.09□□□□□ -1.59
SMG1-217ENST00000569764 NUPR2A6NF83 97 aa5.09□□□□□ -1.59
SMG1-217ENST00000569764 C4orf3Q8WVX3 66 aa5.09□□□□□ -1.59
SMG1-217ENST00000569764 ARFGEF3Q5TH69 2177 aa5.09□□□□□ -1.6
SMG1-217ENST00000569764 SERF1AO75920 110 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 IGLV2-14P01704 120 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 FOXI1Q12951 378 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 MORN3Q6PF18 240 aaPredicted RBP5.08□□□□□ -1.6
SMG1-217ENST00000569764 LINC00173Q6ZV60 143 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 C1orf158Q8N1D5 194 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 ZNF645Q8N7E2 425 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 DCANP1Q8TF63 244 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 PVRIGQ6DKI7 326 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 MRPL30Q8TCC3 161 aaKnown RBP5.08□□□□□ -1.6
SMG1-217ENST00000569764 FAM19A4Q96LR4 140 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 C3orf85A0A1B0GTC6 90 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 M0R381 172 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 FCGR2CP31995 323 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 LINC00205P59089 165 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 LAMTOR3Q9UHA4 124 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 DOCK11Q5JSL3 2073 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 TRBV20OR9-2A0A075B6H5 130 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 TRAV4A0A0B4J268 109 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 UBE2L6O14933 153 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 ORMDL2Q53FV1 153 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 UNQ9165/PRO28630Q6UXU0 137 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 Q6ZRU5 148 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 Q75L30 129 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 RITA1Q96K30 269 aa5.08□□□□□ -1.6
SMG1-217ENST00000569764 TLN2Q9Y4G6 2542 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms