RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 MUC21Q5SSG8 566 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 ADAMTSL5Q6ZMM2 481 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 Q6ZQT7 251 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 LINC00173Q6ZV60 143 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 NRACQ8N912 160 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 OR2K2Q8NGT1 345 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 DPF1Q92782 380 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 MAP1LC3AQ9H492 121 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 ST20Q9HBF5 79 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 UQCR10Q9UDW1 63 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 MRPS16Q9Y3D3 137 aaKnown RBP4.02□□□□□ -1.77
SF3B3-213ENST00000569687 PAM16Q9Y3D7 125 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 CUBNO60494 3623 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 LOC389332A0A1B0GUA5 103 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 OR4C46A6NHA9 309 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 B5MCH6 92 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 F6UB75 175 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 LINC01619G3V211 115 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 K7EMI3 77 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 M0R381 172 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 GNRH2O43555 120 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 PPP1R17O96001 155 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 HBDP02042 147 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 RNASE3P12724 160 aaKnown RBP4.01□□□□□ -1.77
SF3B3-213ENST00000569687 IGLL1P15814 213 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 SRD5A1P18405 259 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 EDN2P20800 178 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 EVI2AP22794 236 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 TSPOP30536 169 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 SSTP61278 116 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 RPL32P62910 135 aaKnown RBP4.01□□□□□ -1.77
SF3B3-213ENST00000569687 FHL3Q13643 280 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 LGALS9BQ3B8N2 356 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 TCTEX1D4Q5JR98 221 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 SPANXN1Q5VSR9 72 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 LGALS9CQ6DKI2 356 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 DGAT2L7PQ6IED9 249 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 ZNF705AQ6ZN79 300 aaPredicted RBP4.01□□□□□ -1.77
SF3B3-213ENST00000569687 FOXI2Q6ZQN5 318 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 Q6ZSV7 163 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 OR1N2Q8NGR9 330 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 C4orf3Q8WVX3 66 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 C20orf78Q9BR46 151 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 SNHG12Q9BXW3 62 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 C16orf95Q9H693 158 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 PEMTQ9UBM1 199 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 ITPR2Q14571 2701 aa4.01□□□□□ -1.77
SF3B3-213ENST00000569687 OTOGQ6ZRI0 2925 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 TRAV25A0A0B4J276 109 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 C7orf71A4D174 169 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 SMKR1H3BMG3 65 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 H3BVH4 76 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 GAS8-AS1O95177 125 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 S100A4P26447 101 aaKnown RBP4□□□□□ -1.77
SF3B3-213ENST00000569687 LINC00315P59091 139 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 DEFB1P60022 68 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 SCGB2A2Q13296 93 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 FAM159AQ6UWV7 190 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 AMTNQ6UX39 209 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 IFI27L1Q96BM0 104 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 SPATA25Q9BR10 227 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 DPH3P1Q9H4G8 78 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 PHLDA3Q9Y5J5 127 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 KIF25-AS1Q9Y6Z4 181 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 HECTD1Q9ULT8 2610 aa4□□□□□ -1.77
SF3B3-213ENST00000569687 ITPR3Q14573 2671 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 IGKV3-7A0A075B6H7 116 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 IGHV3-16A0A0C4DH30 117 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 DNAJC9-AS1A6NH13 148 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 HSBP1L1C9JCN9 74 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 ATP5LO75964 103 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 NCR2O95944 276 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 ZNF688P0C7X2 276 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 GATA1P15976 413 aaPredicted RBP3.99□□□□□ -1.77
SF3B3-213ENST00000569687 CDKN1BP46527 198 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 LAGE3Q14657 143 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 DEFB114Q30KQ6 69 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 MAJINQ3KP22 176 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 OR11H1Q8NG94 326 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 OR9G4Q8NGQ1 327 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 PTH2Q96A98 100 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 C9orf85Q96MD7 179 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 PMCHL2Q9BQD1 86 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 LINC00467Q9BRT7 94 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 YAE1D1Q9NRH1 226 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 CREBBPQ92793 2442 aa3.99□□□□□ -1.77
SF3B3-213ENST00000569687 IGHV1OR15-1A0A075B7D0 117 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 TRAV12-3A0A0B4J271 114 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 LINC01549A6NIU2 74 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 H3BMM0 161 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 DLEU1O43261 78 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 PLA2G1BP04054 148 aaKnown RBP3.98□□□□□ -1.77
SF3B3-213ENST00000569687 SMIM17P0DL12 118 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 HLA-DRB4P13762 266 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 G0S2P27469 103 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 SLURP1P55000 103 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 SUMO2P61956 95 aaKnown RBP3.98□□□□□ -1.77
SF3B3-213ENST00000569687 NUTF2P61970 127 aaKnown RBP3.98□□□□□ -1.77
SF3B3-213ENST00000569687 RNF151Q2KHN1 245 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 ORMDL2Q53FV1 153 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms