RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 FAM19A2Q8N3H0 131 aa11.59□□□□□ -0.55
SNX20-204ENST00000568993 CD33P20138 364 aa11.59□□□□□ -0.55
SNX20-204ENST00000568993 DEFB114Q30KQ6 69 aa11.59□□□□□ -0.55
SNX20-204ENST00000568993 ANXA2RQ3ZCQ2 193 aa11.59□□□□□ -0.55
SNX20-204ENST00000568993 OR10AG1Q8NH19 301 aa11.59□□□□□ -0.55
SNX20-204ENST00000568993 RNF185Q96GF1 192 aa11.59□□□□□ -0.55
SNX20-204ENST00000568993 CUBNO60494 3623 aa11.58□□□□□ -0.56
SNX20-204ENST00000568993 D6R8Y8 96 aa11.58□□□□□ -0.56
SNX20-204ENST00000568993 CCL24O00175 119 aa11.58□□□□□ -0.56
SNX20-204ENST00000568993 CITED2Q99967 270 aaPredicted RBP11.58□□□□□ -0.56
SNX20-204ENST00000568993 SCRT2Q9NQ03 307 aa11.58□□□□□ -0.56
SNX20-204ENST00000568993 HIST2H2BDQ6DRA6 164 aa11.57□□□□□ -0.56
SNX20-204ENST00000568993 TMEM61Q8N0U2 210 aa11.57□□□□□ -0.56
SNX20-204ENST00000568993 PRELID3AQ96N28 172 aa11.57□□□□□ -0.56
SNX20-204ENST00000568993 SIGLEC8Q9NYZ4 499 aa11.57□□□□□ -0.56
SNX20-204ENST00000568993 SORL1Q92673 2214 aa11.57□□□□□ -0.56
SNX20-204ENST00000568993 A8MTW9 85 aa11.57□□□□□ -0.56
SNX20-204ENST00000568993 SCGB1D1O95968 90 aa11.57□□□□□ -0.56
SNX20-204ENST00000568993 TSPOP30536 169 aa11.57□□□□□ -0.56
SNX20-204ENST00000568993 ASIPP42127 132 aa11.57□□□□□ -0.56
SNX20-204ENST00000568993 C11orf44Q8N8P7 122 aa11.57□□□□□ -0.56
SNX20-204ENST00000568993 C7orf71A4D174 169 aa11.56□□□□□ -0.56
SNX20-204ENST00000568993 H3BVH4 76 aa11.56□□□□□ -0.56
SNX20-204ENST00000568993 M0R2Z0 102 aa11.56□□□□□ -0.56
SNX20-204ENST00000568993 PROK1P58294 105 aa11.56□□□□□ -0.56
SNX20-204ENST00000568993 DYNLRB2Q8TF09 96 aa11.56□□□□□ -0.56
SNX20-204ENST00000568993 RNF114Q9Y508 228 aa11.56□□□□□ -0.56
SNX20-204ENST00000568993 TRAV25A0A0B4J276 109 aa11.55□□□□□ -0.56
SNX20-204ENST00000568993 CKS2P33552 79 aa11.55□□□□□ -0.56
SNX20-204ENST00000568993 TDRG1Q3Y452 100 aa11.55□□□□□ -0.56
SNX20-204ENST00000568993 OCIAD2Q56VL3 154 aa11.55□□□□□ -0.56
SNX20-204ENST00000568993 SPANXN1Q5VSR9 72 aa11.55□□□□□ -0.56
SNX20-204ENST00000568993 AMTNQ6UX39 209 aa11.55□□□□□ -0.56
SNX20-204ENST00000568993 LAMTOR2Q9Y2Q5 125 aa11.55□□□□□ -0.56
SNX20-204ENST00000568993 A0A1W2PRX2 142 aa11.54□□□□□ -0.56
SNX20-204ENST00000568993 S100A4P26447 101 aaKnown RBP11.54□□□□□ -0.56
SNX20-204ENST00000568993 ZNF705AQ6ZN79 300 aaPredicted RBP11.54□□□□□ -0.56
SNX20-204ENST00000568993 SPAG8Q99932 426 aaPredicted RBP11.54□□□□□ -0.56
SNX20-204ENST00000568993 AGRNO00468 2067 aa11.54□□□□□ -0.56
SNX20-204ENST00000568993 IGHV1-24A0A0C4DH33 117 aa11.53□□□□□ -0.56
SNX20-204ENST00000568993 GNRH2O43555 120 aa11.53□□□□□ -0.56
SNX20-204ENST00000568993 C3orf79P0CE67 100 aa11.53□□□□□ -0.56
SNX20-204ENST00000568993 RNASE3P12724 160 aaKnown RBP11.53□□□□□ -0.56
SNX20-204ENST00000568993 EVI2AP22794 236 aa11.53□□□□□ -0.56
SNX20-204ENST00000568993 CD300EQ496F6 205 aaPredicted RBP11.53□□□□□ -0.56
SNX20-204ENST00000568993 FAM159AQ6UWV7 190 aa11.53□□□□□ -0.56
SNX20-204ENST00000568993 Q8N976 141 aa11.53□□□□□ -0.56
SNX20-204ENST00000568993 AP5S1Q9NUS5 200 aa11.53□□□□□ -0.56
SNX20-204ENST00000568993 HLA-DRB4P13762 266 aa11.53□□□□□ -0.56
SNX20-204ENST00000568993 DEFB131AP59861 70 aa11.53□□□□□ -0.56
SNX20-204ENST00000568993 KRTDAPP60985 99 aa11.53□□□□□ -0.56
SNX20-204ENST00000568993 PRSS3P2Q8NHM4 247 aa11.53□□□□□ -0.56
SNX20-204ENST00000568993 HLA-DRB4X5D2U9 266 aa11.53□□□□□ -0.56
SNX20-204ENST00000568993 SETD2Q9BYW2 2564 aaPredicted RBP11.52□□□□□ -0.56
SNX20-204ENST00000568993 TRAV12-3A0A0B4J271 114 aa11.52□□□□□ -0.56
SNX20-204ENST00000568993 OR4C46A6NHA9 309 aa11.52□□□□□ -0.56
SNX20-204ENST00000568993 NXPH4O95158 308 aa11.52□□□□□ -0.56
SNX20-204ENST00000568993 NPYP01303 97 aa11.52□□□□□ -0.56
SNX20-204ENST00000568993 SHISA2Q6UWI4 295 aa11.52□□□□□ -0.56
SNX20-204ENST00000568993 ZNF256Q9Y2P7 627 aaPredicted RBP11.52□□□□□ -0.56
SNX20-204ENST00000568993 ADARB2-AS1A8MUL3 147 aa11.52□□□□□ -0.57
SNX20-204ENST00000568993 H3BMM0 161 aa11.52□□□□□ -0.57
SNX20-204ENST00000568993 IGKV3-20P01619 116 aa11.52□□□□□ -0.57
SNX20-204ENST00000568993 IFI27P40305 119 aaPredicted RBP11.52□□□□□ -0.57
SNX20-204ENST00000568993 TEX43Q6ZNM6 134 aa11.52□□□□□ -0.57
SNX20-204ENST00000568993 FA2HQ7L5A8 372 aa11.52□□□□□ -0.57
SNX20-204ENST00000568993 PHLDA3Q9Y5J5 127 aa11.52□□□□□ -0.57
SNX20-204ENST00000568993 A0A1B0GV72 72 aa11.51□□□□□ -0.57
SNX20-204ENST00000568993 SMKR1H3BMG3 65 aa11.51□□□□□ -0.57
SNX20-204ENST00000568993 MAP6D1Q9H9H5 199 aa11.51□□□□□ -0.57
SNX20-204ENST00000568993 LINC01546A6NGU7 62 aa11.5□□□□□ -0.57
SNX20-204ENST00000568993 INAFM1C9JVW0 142 aa11.5□□□□□ -0.57
SNX20-204ENST00000568993 SPINK13Q1W4C9 94 aa11.5□□□□□ -0.57
SNX20-204ENST00000568993 DEFB125Q8N687 156 aa11.5□□□□□ -0.57
SNX20-204ENST00000568993 MIEN1Q9BRT3 115 aa11.5□□□□□ -0.57
SNX20-204ENST00000568993 CST9LQ9H4G1 147 aa11.5□□□□□ -0.57
SNX20-204ENST00000568993 SETXQ7Z333 2677 aaKnown RBP11.5□□□□□ -0.57
SNX20-204ENST00000568993 KNCNA6PVL3 124 aa11.5□□□□□ -0.57
SNX20-204ENST00000568993 NCR2O95944 276 aa11.5□□□□□ -0.57
SNX20-204ENST00000568993 PMCHL1Q16048 86 aa11.5□□□□□ -0.57
SNX20-204ENST00000568993 TIMM8BQ9Y5J9 83 aaPredicted RBP11.5□□□□□ -0.57
SNX20-204ENST00000568993 NSD1Q96L73 2696 aaPredicted RBP11.5□□□□□ -0.57
SNX20-204ENST00000568993 TRAV12-2A0A075B6T6 113 aa11.49□□□□□ -0.57
SNX20-204ENST00000568993 M0R381 172 aa11.49□□□□□ -0.57
SNX20-204ENST00000568993 LEPROTL1O95214 131 aa11.49□□□□□ -0.57
SNX20-204ENST00000568993 TNFRSF6BO95407 300 aa11.49□□□□□ -0.57
SNX20-204ENST00000568993 OR4C5Q8NGB2 326 aa11.49□□□□□ -0.57
SNX20-204ENST00000568993 MUC4Q99102 2169 aa11.49□□□□□ -0.57
SNX20-204ENST00000568993 WNK1Q9H4A3 2382 aa11.49□□□□□ -0.57
SNX20-204ENST00000568993 LOC389332A0A1B0GUA5 103 aa11.48□□□□□ -0.57
SNX20-204ENST00000568993 CRXO43186 299 aaPredicted RBP11.48□□□□□ -0.57
SNX20-204ENST00000568993 GAS8-AS1O95177 125 aa11.48□□□□□ -0.57
SNX20-204ENST00000568993 SCGB1A1P11684 91 aa11.48□□□□□ -0.57
SNX20-204ENST00000568993 MRAP2Q96G30 205 aa11.48□□□□□ -0.57
SNX20-204ENST00000568993 C20orf144Q9BQM9 153 aa11.48□□□□□ -0.57
SNX20-204ENST00000568993 MAP1LC3AQ9H492 121 aa11.48□□□□□ -0.57
SNX20-204ENST00000568993 IGHV1OR15-1A0A075B7D0 117 aa11.48□□□□□ -0.57
SNX20-204ENST00000568993 IGHV3-16A0A0C4DH30 117 aa11.48□□□□□ -0.57
SNX20-204ENST00000568993 CD7P09564 240 aa11.48□□□□□ -0.57
SNX20-204ENST00000568993 C9orf85Q96MD7 179 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms