RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 DPPA3Q6W0C5 159 aa10.37□□□□□ -0.75
HERPUD1-215ENST00000568676 ALG5Q9Y673 324 aa10.37□□□□□ -0.75
HERPUD1-215ENST00000568676 TRAV8-1A0A0A6YYK1 113 aa10.36□□□□□ -0.75
HERPUD1-215ENST00000568676 IGHV3-73A0A0B4J1V6 119 aa10.36□□□□□ -0.75
HERPUD1-215ENST00000568676 A0A1W2PPV4 95 aa10.36□□□□□ -0.75
HERPUD1-215ENST00000568676 RBFOX3A6NFN3 312 aa10.36□□□□□ -0.75
HERPUD1-215ENST00000568676 A8MWV9 139 aa10.36□□□□□ -0.75
HERPUD1-215ENST00000568676 H0YIZ8 118 aa10.36□□□□□ -0.75
HERPUD1-215ENST00000568676 LECT2O14960 151 aa10.36□□□□□ -0.75
HERPUD1-215ENST00000568676 FGF8P55075 233 aaPredicted RBP10.36□□□□□ -0.75
HERPUD1-215ENST00000568676 ZFP69Q49AA0 526 aa10.36□□□□□ -0.75
HERPUD1-215ENST00000568676 URGCP-MRPS24S4R325 110 aa10.36□□□□□ -0.75
HERPUD1-215ENST00000568676 LINC00694P0DN24 101 aa10.35□□□□□ -0.75
HERPUD1-215ENST00000568676 H2BFSP57053 126 aa10.35□□□□□ -0.75
HERPUD1-215ENST00000568676 DAZ4Q86SG3 579 aaKnown RBP10.35□□□□□ -0.75
HERPUD1-215ENST00000568676 CYB561D1Q8N8Q1 229 aa10.35□□□□□ -0.75
HERPUD1-215ENST00000568676 OR10G9Q8NGN4 311 aa10.35□□□□□ -0.75
HERPUD1-215ENST00000568676 PPP1R1CQ8WVI7 109 aa10.35□□□□□ -0.75
HERPUD1-215ENST00000568676 MED28Q9H204 178 aa10.35□□□□□ -0.75
HERPUD1-215ENST00000568676 DAZ3Q9NR90 486 aaKnown RBP10.35□□□□□ -0.75
HERPUD1-215ENST00000568676 HSPB11Q9Y547 144 aa10.35□□□□□ -0.75
HERPUD1-215ENST00000568676 RNF222A6NCQ9 220 aa10.34□□□□□ -0.75
HERPUD1-215ENST00000568676 PGPEP1LA6NFU8 196 aa10.34□□□□□ -0.75
HERPUD1-215ENST00000568676 IGLV2-8P01709 118 aa10.34□□□□□ -0.75
HERPUD1-215ENST00000568676 KRTAP10-4P60372 401 aaPredicted RBP10.34□□□□□ -0.75
HERPUD1-215ENST00000568676 C5orf17Q8NAS9 161 aa10.34□□□□□ -0.75
HERPUD1-215ENST00000568676 BAALCQ8WXS3 180 aa10.34□□□□□ -0.75
HERPUD1-215ENST00000568676 PLA2G2DQ9UNK4 145 aa10.34□□□□□ -0.75
HERPUD1-215ENST00000568676 GCGP01275 180 aa10.33□□□□□ -0.76
HERPUD1-215ENST00000568676 RNASE3P12724 160 aaKnown RBP10.33□□□□□ -0.76
HERPUD1-215ENST00000568676 SMUG1Q53HV7 270 aa10.33□□□□□ -0.76
HERPUD1-215ENST00000568676 CHCHD7Q9BUK0 85 aa10.33□□□□□ -0.76
HERPUD1-215ENST00000568676 PARLQ9H300 379 aa10.33□□□□□ -0.76
HERPUD1-215ENST00000568676 C11orf21Q9P2W6 132 aa10.33□□□□□ -0.76
HERPUD1-215ENST00000568676 GAGE12JA6NER3 117 aa10.32□□□□□ -0.76
HERPUD1-215ENST00000568676 MPC2O95563 127 aa10.32□□□□□ -0.76
HERPUD1-215ENST00000568676 TCRAP04437 139 aa10.32□□□□□ -0.76
HERPUD1-215ENST00000568676 ZNF80P51504 273 aaPredicted RBP10.32□□□□□ -0.76
HERPUD1-215ENST00000568676 GNG5P63218 68 aa10.32□□□□□ -0.76
HERPUD1-215ENST00000568676 GAGE1Q13065 139 aa10.32□□□□□ -0.76
HERPUD1-215ENST00000568676 GAGE4Q13068 117 aa10.32□□□□□ -0.76
HERPUD1-215ENST00000568676 GAGE5Q13069 117 aa10.32□□□□□ -0.76
HERPUD1-215ENST00000568676 ELOBQ15370 118 aa10.32□□□□□ -0.76
HERPUD1-215ENST00000568676 GAGE13Q4V321 117 aa10.32□□□□□ -0.76
HERPUD1-215ENST00000568676 SAPCD1Q5SSQ6 148 aa10.32□□□□□ -0.76
HERPUD1-215ENST00000568676 Q8N3U1 123 aa10.32□□□□□ -0.76
HERPUD1-215ENST00000568676 CIRBP-AS1Q8TBR5 109 aa10.32□□□□□ -0.76
HERPUD1-215ENST00000568676 HMCN2Q8NDA2 5059 aa10.32□□□□□ -0.76
HERPUD1-215ENST00000568676 RPL12P30050 165 aaKnown RBP10.31□□□□□ -0.76
HERPUD1-215ENST00000568676 C14orf177Q52M58 125 aa10.31□□□□□ -0.76
HERPUD1-215ENST00000568676 LINC00479Q96M42 142 aa10.31□□□□□ -0.76
HERPUD1-215ENST00000568676 PSG8Q9UQ74 426 aa10.31□□□□□ -0.76
HERPUD1-215ENST00000568676 IGKV2D-24A0A075B6R9 120 aa10.3□□□□□ -0.76
HERPUD1-215ENST00000568676 RHODO00212 210 aa10.3□□□□□ -0.76
HERPUD1-215ENST00000568676 IGLV2-11P01706 119 aa10.3□□□□□ -0.76
HERPUD1-215ENST00000568676 S100A4P26447 101 aaKnown RBP10.3□□□□□ -0.76
HERPUD1-215ENST00000568676 FLI1Q01543 452 aaPredicted RBP10.3□□□□□ -0.76
HERPUD1-215ENST00000568676 LINC01620Q4KN68 170 aa10.3□□□□□ -0.76
HERPUD1-215ENST00000568676 NIT1Q86X76 327 aa10.3□□□□□ -0.76
HERPUD1-215ENST00000568676 OR10G7Q8NGN6 311 aa10.3□□□□□ -0.76
HERPUD1-215ENST00000568676 SGK494Q96LW2 274 aa10.3□□□□□ -0.76
HERPUD1-215ENST00000568676 Q0VG73 95 aa10.29□□□□□ -0.76
HERPUD1-215ENST00000568676 LGALSLQ3ZCW2 172 aaPredicted RBP10.29□□□□□ -0.76
HERPUD1-215ENST00000568676 KCNIP4Q6PIL6 250 aa10.29□□□□□ -0.76
HERPUD1-215ENST00000568676 ATRAIDQ6UW56 229 aa10.29□□□□□ -0.76
HERPUD1-215ENST00000568676 TMEM75Q8N9X5 138 aa10.29□□□□□ -0.76
HERPUD1-215ENST00000568676 SUN5Q8TC36 379 aa10.29□□□□□ -0.76
HERPUD1-215ENST00000568676 SMIM3Q9BZL3 60 aa10.29□□□□□ -0.76
HERPUD1-215ENST00000568676 A0A087WX48 190 aa10.28□□□□□ -0.76
HERPUD1-215ENST00000568676 EIF3GO75821 320 aaKnown RBP eCLIP10.28□□□□□ -0.76
HERPUD1-215ENST00000568676 STAG3L2P0CL84 134 aa10.28□□□□□ -0.76
HERPUD1-215ENST00000568676 STAG3L3P0CL85 134 aa10.28□□□□□ -0.76
HERPUD1-215ENST00000568676 ARL14EPLP0DKL9 152 aa10.28□□□□□ -0.76
HERPUD1-215ENST00000568676 ASIPP42127 132 aa10.28□□□□□ -0.76
HERPUD1-215ENST00000568676 CDC34P49427 236 aaPredicted RBP10.28□□□□□ -0.76
HERPUD1-215ENST00000568676 RAB2AP61019 212 aa10.28□□□□□ -0.76
HERPUD1-215ENST00000568676 UFSP1Q6NVU6 142 aa10.28□□□□□ -0.76
HERPUD1-215ENST00000568676 OR2T35Q8NGX2 323 aa10.28□□□□□ -0.76
HERPUD1-215ENST00000568676 IL36BQ9NZH7 164 aa10.28□□□□□ -0.76
HERPUD1-215ENST00000568676 LRP1Q07954 4544 aaKnown RBP10.28□□□□□ -0.76
HERPUD1-215ENST00000568676 GIPP09681 153 aaPredicted RBP10.27□□□□□ -0.77
HERPUD1-215ENST00000568676 PRNTQ86SH4 94 aa10.27□□□□□ -0.77
HERPUD1-215ENST00000568676 TMEM167BQ9NRX6 74 aa10.27□□□□□ -0.77
HERPUD1-215ENST00000568676 KLK12Q9UKR0 248 aa10.27□□□□□ -0.77
HERPUD1-215ENST00000568676 EPDR1Q9UM22 224 aa10.27□□□□□ -0.77
HERPUD1-215ENST00000568676 FABP5P3A8MUU1 101 aa10.26□□□□□ -0.77
HERPUD1-215ENST00000568676 HMGB3O15347 200 aaKnown RBP10.26□□□□□ -0.77
HERPUD1-215ENST00000568676 SUMO1P63165 101 aaKnown RBP10.26□□□□□ -0.77
HERPUD1-215ENST00000568676 OR2G3Q8NGZ4 309 aa10.26□□□□□ -0.77
HERPUD1-215ENST00000568676 UBE2WQ96B02 151 aa10.26□□□□□ -0.77
HERPUD1-215ENST00000568676 SAMD10Q9BYL1 202 aa10.26□□□□□ -0.77
HERPUD1-215ENST00000568676 IGKV3D-20A0A0C4DH25 116 aa10.25□□□□□ -0.77
HERPUD1-215ENST00000568676 MBP02144 154 aa10.25□□□□□ -0.77
HERPUD1-215ENST00000568676 GCHFRP30047 84 aa10.25□□□□□ -0.77
HERPUD1-215ENST00000568676 RPL37AP61513 92 aaKnown RBP10.25□□□□□ -0.77
HERPUD1-215ENST00000568676 C14orf178Q8N769 122 aaPredicted RBP10.25□□□□□ -0.77
HERPUD1-215ENST00000568676 TRBV10-1A0A0K0K1A3 114 aa10.24□□□□□ -0.77
HERPUD1-215ENST00000568676 DNLZQ5SXM8 178 aa10.24□□□□□ -0.77
HERPUD1-215ENST00000568676 DMRTA1Q5VZB9 504 aa10.24□□□□□ -0.77
HERPUD1-215ENST00000568676 RAB24Q969Q5 203 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms