RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SAMD10Q9BYL1 202 aa10.84□□□□□ -0.67
COMMD4-221ENST00000567935 NAGKQ9UJ70 344 aa10.84□□□□□ -0.67
COMMD4-221ENST00000567935 U3KQK5 164 aa10.84□□□□□ -0.67
COMMD4-221ENST00000567935 ADARB2-AS1A8MUL3 147 aa10.83□□□□□ -0.68
COMMD4-221ENST00000567935 LINC00310P59036 64 aa10.83□□□□□ -0.68
COMMD4-221ENST00000567935 ANXA2RQ3ZCQ2 193 aa10.83□□□□□ -0.68
COMMD4-221ENST00000567935 ORMDL3Q8N138 153 aa10.83□□□□□ -0.68
COMMD4-221ENST00000567935 MAP6D1Q9H9H5 199 aa10.83□□□□□ -0.68
COMMD4-221ENST00000567935 LAMTOR2Q9Y2Q5 125 aa10.83□□□□□ -0.68
COMMD4-221ENST00000567935 J3KRW8 73 aa10.82□□□□□ -0.68
COMMD4-221ENST00000567935 ZNF324O75467 553 aaPredicted RBP10.82□□□□□ -0.68
COMMD4-221ENST00000567935 CD33P20138 364 aa10.82□□□□□ -0.68
COMMD4-221ENST00000567935 PMCHP20382 165 aa10.82□□□□□ -0.68
COMMD4-221ENST00000567935 SPANXN1Q5VSR9 72 aa10.82□□□□□ -0.68
COMMD4-221ENST00000567935 AMTNQ6UX39 209 aa10.82□□□□□ -0.68
COMMD4-221ENST00000567935 FAM110AQ9BQ89 295 aa10.82□□□□□ -0.68
COMMD4-221ENST00000567935 SCRT2Q9NQ03 307 aa10.82□□□□□ -0.68
COMMD4-221ENST00000567935 ZNF256Q9Y2P7 627 aaPredicted RBP10.82□□□□□ -0.68
COMMD4-221ENST00000567935 COL7A1Q02388 2944 aa10.81□□□□□ -0.68
COMMD4-221ENST00000567935 H3BMM0 161 aa10.81□□□□□ -0.68
COMMD4-221ENST00000567935 H3BVH4 76 aa10.81□□□□□ -0.68
COMMD4-221ENST00000567935 NUPR1O60356 82 aa10.81□□□□□ -0.68
COMMD4-221ENST00000567935 HSBP1O75506 76 aa10.81□□□□□ -0.68
COMMD4-221ENST00000567935 RAB4AP20338 218 aa10.81□□□□□ -0.68
COMMD4-221ENST00000567935 JOSD1Q15040 202 aaPredicted RBP10.81□□□□□ -0.68
COMMD4-221ENST00000567935 C20orf144Q9BQM9 153 aa10.81□□□□□ -0.68
COMMD4-221ENST00000567935 AMTP48728 403 aa10.8□□□□□ -0.68
COMMD4-221ENST00000567935 PYY3Q5JQD4 70 aa10.8□□□□□ -0.68
COMMD4-221ENST00000567935 AMN1Q8IY45 258 aa10.8□□□□□ -0.68
COMMD4-221ENST00000567935 OR10AG1Q8NH19 301 aa10.8□□□□□ -0.68
COMMD4-221ENST00000567935 RCHY1Q96PM5 261 aa10.8□□□□□ -0.68
COMMD4-221ENST00000567935 PHLDA3Q9Y5J5 127 aa10.8□□□□□ -0.68
COMMD4-221ENST00000567935 TRAV12-3A0A0B4J271 114 aa10.79□□□□□ -0.68
COMMD4-221ENST00000567935 NXPH4O95158 308 aa10.79□□□□□ -0.68
COMMD4-221ENST00000567935 IGLV1-51P01701 117 aa10.79□□□□□ -0.68
COMMD4-221ENST00000567935 CKS2P33552 79 aa10.79□□□□□ -0.68
COMMD4-221ENST00000567935 IQCJQ1A5X6 159 aa10.79□□□□□ -0.68
COMMD4-221ENST00000567935 NSUN5P1Q3KNT7 163 aa10.79□□□□□ -0.68
COMMD4-221ENST00000567935 MRPL51Q4U2R6 128 aaKnown RBP10.79□□□□□ -0.68
COMMD4-221ENST00000567935 MUC21Q5SSG8 566 aa10.79□□□□□ -0.68
COMMD4-221ENST00000567935 PRELID3AQ96N28 172 aa10.79□□□□□ -0.68
COMMD4-221ENST00000567935 WWC2-AS2Q96NR7 200 aa10.79□□□□□ -0.68
COMMD4-221ENST00000567935 DNAH1Q9P2D7 4330 aa10.78□□□□□ -0.68
COMMD4-221ENST00000567935 TRGV11A0A075B6L2 103 aa10.78□□□□□ -0.68
COMMD4-221ENST00000567935 IGHV1OR15-1A0A075B7D0 117 aa10.78□□□□□ -0.68
COMMD4-221ENST00000567935 D6R8Y8 96 aa10.78□□□□□ -0.68
COMMD4-221ENST00000567935 SAP30O75446 220 aa10.78□□□□□ -0.68
COMMD4-221ENST00000567935 LINC00614P0C842 121 aa10.78□□□□□ -0.68
COMMD4-221ENST00000567935 KIR3DS1Q14943 382 aa10.78□□□□□ -0.68
COMMD4-221ENST00000567935 SPINK13Q1W4C9 94 aa10.78□□□□□ -0.68
COMMD4-221ENST00000567935 RNASEKQ6P5S7 137 aaKnown RBP10.78□□□□□ -0.68
COMMD4-221ENST00000567935 Q6ZQT7 251 aa10.78□□□□□ -0.68
COMMD4-221ENST00000567935 NIT1Q86X76 327 aa10.78□□□□□ -0.68
COMMD4-221ENST00000567935 SORL1Q92673 2214 aa10.78□□□□□ -0.68
COMMD4-221ENST00000567935 HYDINQ4G0P3 5121 aa10.77□□□□□ -0.68
COMMD4-221ENST00000567935 MUC21A0A0G2JKD1 596 aa10.77□□□□□ -0.69
COMMD4-221ENST00000567935 MUC21A0A140T8X8 626 aa10.77□□□□□ -0.69
COMMD4-221ENST00000567935 KNCNA6PVL3 124 aa10.77□□□□□ -0.69
COMMD4-221ENST00000567935 OR11H12B2RN74 326 aa10.77□□□□□ -0.69
COMMD4-221ENST00000567935 M0R2Z0 102 aa10.77□□□□□ -0.69
COMMD4-221ENST00000567935 IGKV3-20P01619 116 aa10.77□□□□□ -0.69
COMMD4-221ENST00000567935 PF4P02776 101 aa10.77□□□□□ -0.69
COMMD4-221ENST00000567935 RNASE3P12724 160 aaKnown RBP10.77□□□□□ -0.69
COMMD4-221ENST00000567935 MRAP2Q96G30 205 aa10.77□□□□□ -0.69
COMMD4-221ENST00000567935 RNF185Q96GF1 192 aa10.77□□□□□ -0.69
COMMD4-221ENST00000567935 AP1S3Q96PC3 154 aa10.77□□□□□ -0.69
COMMD4-221ENST00000567935 LINC00467Q9BRT7 94 aa10.77□□□□□ -0.69
COMMD4-221ENST00000567935 NIT2Q9NQR4 276 aa10.77□□□□□ -0.69
COMMD4-221ENST00000567935 MSRB1Q9NZV6 116 aa10.77□□□□□ -0.69
COMMD4-221ENST00000567935 CD7P09564 240 aa10.76□□□□□ -0.69
COMMD4-221ENST00000567935 SSTP61278 116 aa10.76□□□□□ -0.69
COMMD4-221ENST00000567935 ODF3L2Q3SX64 289 aa10.76□□□□□ -0.69
COMMD4-221ENST00000567935 FA2HQ7L5A8 372 aa10.76□□□□□ -0.69
COMMD4-221ENST00000567935 SYT8Q8NBV8 401 aa10.76□□□□□ -0.69
COMMD4-221ENST00000567935 DPH3P1Q9H4G8 78 aa10.76□□□□□ -0.69
COMMD4-221ENST00000567935 AGRNO00468 2067 aa10.75□□□□□ -0.69
COMMD4-221ENST00000567935 GNRH2O43555 120 aa10.75□□□□□ -0.69
COMMD4-221ENST00000567935 INSL3P51460 131 aa10.75□□□□□ -0.69
COMMD4-221ENST00000567935 S100A12P80511 92 aa10.75□□□□□ -0.69
COMMD4-221ENST00000567935 LINC00482Q8N8I6 264 aa10.75□□□□□ -0.69
COMMD4-221ENST00000567935 PRSS3P2Q8NHM4 247 aa10.75□□□□□ -0.69
COMMD4-221ENST00000567935 C9orf85Q96MD7 179 aa10.75□□□□□ -0.69
COMMD4-221ENST00000567935 MAP1LC3AQ9H492 121 aa10.75□□□□□ -0.69
COMMD4-221ENST00000567935 AP5S1Q9NUS5 200 aa10.75□□□□□ -0.69
COMMD4-221ENST00000567935 TRAV12-2A0A075B6T6 113 aa10.74□□□□□ -0.69
COMMD4-221ENST00000567935 IGHV3-16A0A0C4DH30 117 aa10.74□□□□□ -0.69
COMMD4-221ENST00000567935 M0R381 172 aa10.74□□□□□ -0.69
COMMD4-221ENST00000567935 PPP1R17O96001 155 aa10.74□□□□□ -0.69
COMMD4-221ENST00000567935 NUTF2P61970 127 aaKnown RBP10.74□□□□□ -0.69
COMMD4-221ENST00000567935 Q6ZWC4 215 aa10.74□□□□□ -0.69
COMMD4-221ENST00000567935 STHQ8IWL8 128 aa10.74□□□□□ -0.69
COMMD4-221ENST00000567935 DEFB125Q8N687 156 aa10.74□□□□□ -0.69
COMMD4-221ENST00000567935 URB1-AS1Q96HZ7 61 aa10.74□□□□□ -0.69
COMMD4-221ENST00000567935 GSN-AS1Q9NRJ2 163 aa10.74□□□□□ -0.69
COMMD4-221ENST00000567935 TIMM8BQ9Y5J9 83 aaPredicted RBP10.74□□□□□ -0.69
COMMD4-221ENST00000567935 PRSS47A8MTI9 375 aa10.73□□□□□ -0.69
COMMD4-221ENST00000567935 CRXO43186 299 aaPredicted RBP10.73□□□□□ -0.69
COMMD4-221ENST00000567935 INSP01308 110 aa10.73□□□□□ -0.69
COMMD4-221ENST00000567935 EVI2AP22794 236 aa10.73□□□□□ -0.69
COMMD4-221ENST00000567935 PIK3CD-AS1Q5SR53 167 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms