RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 NXPH4O95158 308 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 GCGP01275 180 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 IGLV2-11P01706 119 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 PFN1P07737 140 aaKnown RBP3.28□□□□□ -1.88
CLK3-219ENST00000567805 SFTA3P0C7M3 94 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 SRIP30626 198 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 ZNF80P51504 273 aaPredicted RBP3.28□□□□□ -1.88
CLK3-219ENST00000567805 FLI1Q01543 452 aaPredicted RBP3.28□□□□□ -1.88
CLK3-219ENST00000567805 SMUG1Q53HV7 270 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 SAPCD1Q5SSQ6 148 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 AKR1C8PQ5T2L2 129 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 LYPD5Q6UWN5 251 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 SH2D6Q7Z4S9 175 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 PRNTQ86SH4 94 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 ZNF575Q86XF7 245 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 OR4C5Q8NGB2 326 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 SGK494Q96LW2 274 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 TXNDC17Q9BRA2 123 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 NKX6-2Q9C056 277 aaPredicted RBP3.28□□□□□ -1.88
CLK3-219ENST00000567805 PCLOQ9Y6V0 5065 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 TRAV9-2A0A087WT02 112 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 FAM74A7A6NL05 159 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 PEX7O00628 323 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 ARPC5O15511 151 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 IFNA7P01567 189 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 GYPEP15421 78 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 GATA1P15976 413 aaPredicted RBP3.27□□□□□ -1.89
CLK3-219ENST00000567805 PPT1P50897 306 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 LINC00315P59091 139 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 ZNF726P1Q15940 193 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 ZNF876PQ49A33 203 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 HIST1H2BAQ96A08 127 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 PTH2Q96A98 100 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 C9orf85Q96MD7 179 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 C11orf21Q9P2W6 132 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 LY96Q9Y6Y9 160 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 ARL2-SNX15V9GYD0 113 aa3.27□□□□□ -1.89
CLK3-219ENST00000567805 APOBP04114 4563 aaKnown RBP3.27□□□□□ -1.89
CLK3-219ENST00000567805 TRAV34A0A0B4J273 112 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 MAP1LC3B2A6NCE7 125 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 HMSDA8MTL9 139 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 FABP5P3A8MUU1 101 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 RS1O15537 224 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 CDK2AP2O75956 126 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 DNAH10OSP0CZ25 163 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 RNASE3P12724 160 aaKnown RBP3.26□□□□□ -1.89
CLK3-219ENST00000567805 EVI2AP22794 236 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 FHITP49789 147 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 FGF8P55075 233 aaPredicted RBP3.26□□□□□ -1.89
CLK3-219ENST00000567805 TIRAPP58753 221 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 UBE2G2P60604 165 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 ZNF345Q14585 488 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 ZNF506Q5JVG8 444 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 PIK3CD-AS1Q5SR53 167 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 CFAP126Q5VTH2 177 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 Q6ZRN7 208 aaPredicted RBP3.26□□□□□ -1.89
CLK3-219ENST00000567805 SPATA12Q7Z6I5 190 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 Q86TA4 180 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 NFE4Q86UQ8 179 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 SLC25A29Q8N8R3 303 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 NHLRC2Q8NBF2 726 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 STOML3Q8TAV4 291 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 LINC00479Q96M42 142 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 TCEAL7Q9BRU2 100 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 PRADC1Q9BSG0 188 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 MAP1LC3BQ9GZQ8 125 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 CYTL1Q9NRR1 136 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 PLA2G2DQ9UNK4 145 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 ZFP30Q9Y2G7 519 aa3.26□□□□□ -1.89
CLK3-219ENST00000567805 RYR1P21817 5038 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 IGKV3D-20A0A0C4DH25 116 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 A0A0D9SG52 128 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 LOC100131303A0A0U1RQF7 123 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 TRBV6-4A0A1B0GX49 114 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 PGPEP1LA6NFU8 196 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 A8MWV9 139 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 B4DEV8 164 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 UMAD1C9J7I0 102 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 SMLR1H3BR10 107 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 SEC11BP0C7V7 166 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 MGST1P10620 155 aaKnown RBP3.25□□□□□ -1.89
CLK3-219ENST00000567805 S100A4P26447 101 aaKnown RBP3.25□□□□□ -1.89
CLK3-219ENST00000567805 ASIPP42127 132 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 ERVFC1-1P60608 527 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 UBE2G1P62253 170 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 RHOHQ15669 191 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 DPPA3Q6W0C5 159 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 ZFP2Q6ZN57 461 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 COX8CQ7Z4L0 72 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 WFDC10BQ8IUB3 73 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 C10orf126Q8N4M7 172 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 KCNRGQ8N5I3 272 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 FMC1Q96HJ9 113 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 IL36BQ9NZH7 164 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 MSRB1Q9NZV6 116 aa3.25□□□□□ -1.89
CLK3-219ENST00000567805 IGHV3-73A0A0B4J1V6 119 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 TRAV8-6A0A0B4J262 113 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 IGHV3-38A0A0C4DH36 116 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 TRBV6-1A0A0K0K1D8 114 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 KANTRA0A1W2PQU2 76 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms