RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 BEAN1Q3B7T3 259 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 PRR31Q5SQ13 230 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 C9orf66Q5T8R8 295 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 OR10AG1Q8NH19 301 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 FAM110AQ9BQ89 295 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 MSRB1Q9NZV6 116 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 TP53TG3Q9ULZ0 132 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 SORL1Q92673 2214 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 TRGV11A0A075B6L2 103 aa8.01□□□□□ -1.13
VPS9D1-206ENST00000567379 RBMY1BA6NDE4 496 aaKnown RBP8.01□□□□□ -1.13
VPS9D1-206ENST00000567379 RBMY1EA6NEQ0 496 aaKnown RBP8.01□□□□□ -1.13
VPS9D1-206ENST00000567379 RBMY1DP0C7P1 496 aaKnown RBP8.01□□□□□ -1.13
VPS9D1-206ENST00000567379 MRPL51Q4U2R6 128 aaKnown RBP8.01□□□□□ -1.13
VPS9D1-206ENST00000567379 DMRTA1Q5VZB9 504 aa8.01□□□□□ -1.13
VPS9D1-206ENST00000567379 AMN1Q8IY45 258 aa8.01□□□□□ -1.13
VPS9D1-206ENST00000567379 HIST1H2BLQ99880 126 aa8.01□□□□□ -1.13
VPS9D1-206ENST00000567379 C20orf144Q9BQM9 153 aa8.01□□□□□ -1.13
VPS9D1-206ENST00000567379 SCRT2Q9NQ03 307 aa8.01□□□□□ -1.13
VPS9D1-206ENST00000567379 NUPR1O60356 82 aa8□□□□□ -1.13
VPS9D1-206ENST00000567379 INSP01308 110 aa8□□□□□ -1.13
VPS9D1-206ENST00000567379 PPBPP02775 128 aa8□□□□□ -1.13
VPS9D1-206ENST00000567379 RNASE3P12724 160 aaKnown RBP8□□□□□ -1.13
VPS9D1-206ENST00000567379 NUTF2P61970 127 aaKnown RBP8□□□□□ -1.13
VPS9D1-206ENST00000567379 IQCJQ1A5X6 159 aa8□□□□□ -1.13
VPS9D1-206ENST00000567379 TRPT1Q86TN4 253 aaKnown RBP8□□□□□ -1.13
VPS9D1-206ENST00000567379 ORMDL3Q8N138 153 aa8□□□□□ -1.13
VPS9D1-206ENST00000567379 OR10D4PQ8NGN7 298 aa8□□□□□ -1.13
VPS9D1-206ENST00000567379 PACRGQ96M98 296 aaPredicted RBP8□□□□□ -1.13
VPS9D1-206ENST00000567379 MCRIP2Q9BUT9 160 aaKnown RBP8□□□□□ -1.13
VPS9D1-206ENST00000567379 SAMD10Q9BYL1 202 aa8□□□□□ -1.13
VPS9D1-206ENST00000567379 U3KQK5 164 aa8□□□□□ -1.13
VPS9D1-206ENST00000567379 IGHV3-16A0A0C4DH30 117 aa7.99□□□□□ -1.13
VPS9D1-206ENST00000567379 D6R8Y8 96 aa7.99□□□□□ -1.13
VPS9D1-206ENST00000567379 M0R381 172 aa7.99□□□□□ -1.13
VPS9D1-206ENST00000567379 CRXO43186 299 aaPredicted RBP7.99□□□□□ -1.13
VPS9D1-206ENST00000567379 RAB4AP20338 218 aa7.99□□□□□ -1.13
VPS9D1-206ENST00000567379 CKS2P33552 79 aa7.99□□□□□ -1.13
VPS9D1-206ENST00000567379 KRTAP24-1Q3LI83 254 aa7.99□□□□□ -1.13
VPS9D1-206ENST00000567379 PRELID3AQ96N28 172 aa7.99□□□□□ -1.13
VPS9D1-206ENST00000567379 CBY3A6NI87 242 aa7.98□□□□□ -1.13
VPS9D1-206ENST00000567379 NXPH4O95158 308 aa7.98□□□□□ -1.13
VPS9D1-206ENST00000567379 SMIM6P0DI80 62 aa7.98□□□□□ -1.13
VPS9D1-206ENST00000567379 LINC00310P59036 64 aa7.98□□□□□ -1.13
VPS9D1-206ENST00000567379 RNASEKQ6P5S7 137 aaKnown RBP7.98□□□□□ -1.13
VPS9D1-206ENST00000567379 NIT1Q86X76 327 aa7.98□□□□□ -1.13
VPS9D1-206ENST00000567379 Q8N1Y9 231 aa7.98□□□□□ -1.13
VPS9D1-206ENST00000567379 SYT8Q8NBV8 401 aa7.98□□□□□ -1.13
VPS9D1-206ENST00000567379 CHCHD1Q96BP2 118 aaKnown RBP7.98□□□□□ -1.13
VPS9D1-206ENST00000567379 RNF185Q96GF1 192 aa7.98□□□□□ -1.13
VPS9D1-206ENST00000567379 C9orf85Q96MD7 179 aa7.98□□□□□ -1.13
VPS9D1-206ENST00000567379 AP1S3Q96PC3 154 aa7.98□□□□□ -1.13
VPS9D1-206ENST00000567379 RCHY1Q96PM5 261 aa7.98□□□□□ -1.13
VPS9D1-206ENST00000567379 LINC00467Q9BRT7 94 aa7.98□□□□□ -1.13
VPS9D1-206ENST00000567379 HSBP1O75506 76 aa7.97□□□□□ -1.13
VPS9D1-206ENST00000567379 EVI2AP22794 236 aa7.97□□□□□ -1.13
VPS9D1-206ENST00000567379 LINC00518Q8N0U6 118 aa7.97□□□□□ -1.13
VPS9D1-206ENST00000567379 LINC01587Q99440 93 aa7.97□□□□□ -1.13
VPS9D1-206ENST00000567379 ZNF747Q9BV97 191 aa7.97□□□□□ -1.13
VPS9D1-206ENST00000567379 DPH3P1Q9H4G8 78 aa7.97□□□□□ -1.13
VPS9D1-206ENST00000567379 LAMTOR2Q9Y2Q5 125 aa7.97□□□□□ -1.13
VPS9D1-206ENST00000567379 SPRY2O43597 315 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 LINC00614P0C842 121 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 RBMY1A1P0DJD3 496 aaKnown RBP7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 RBMY1CP0DJD4 496 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 SMIM17P0DL12 118 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 PMCHP20382 165 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 AMTP48728 403 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 RBMY1FQ15415 496 aaKnown RBP7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 MORN3Q6PF18 240 aaPredicted RBP7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 FA2HQ7L5A8 372 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 GTSCR1Q86UQ5 136 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 PRSS3P2Q8NHM4 247 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 MRAP2Q96G30 205 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 TMEM208Q9BTX3 173 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 C19orf73Q9NVV2 129 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 MDFICQ9P1T7 246 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 XCL2Q9UBD3 114 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 MGAM2Q2M2H8 2515 aa7.96□□□□□ -1.14
VPS9D1-206ENST00000567379 SMKR1H3BMG3 65 aa7.95□□□□□ -1.14
VPS9D1-206ENST00000567379 NCR2O95944 276 aa7.95□□□□□ -1.14
VPS9D1-206ENST00000567379 HTN1P15515 57 aa7.95□□□□□ -1.14
VPS9D1-206ENST00000567379 ZNF415Q09FC8 603 aa7.95□□□□□ -1.14
VPS9D1-206ENST00000567379 C3orf56Q8N813 242 aa7.95□□□□□ -1.14
VPS9D1-206ENST00000567379 C12orf57Q99622 126 aa7.95□□□□□ -1.14
VPS9D1-206ENST00000567379 C1QTNF4Q9BXJ3 329 aa7.95□□□□□ -1.14
VPS9D1-206ENST00000567379 MAP1LC3AQ9H492 121 aa7.95□□□□□ -1.14
VPS9D1-206ENST00000567379 NPYP01303 97 aa7.94□□□□□ -1.14
VPS9D1-206ENST00000567379 MGPP08493 103 aa7.94□□□□□ -1.14
VPS9D1-206ENST00000567379 RPL35AP18077 110 aaKnown RBP7.94□□□□□ -1.14
VPS9D1-206ENST00000567379 C12orf54Q6X4T0 127 aa7.94□□□□□ -1.14
VPS9D1-206ENST00000567379 C14orf178Q8N769 122 aaPredicted RBP7.94□□□□□ -1.14
VPS9D1-206ENST00000567379 WFDC9Q8NEX5 89 aa7.94□□□□□ -1.14
VPS9D1-206ENST00000567379 URB1-AS1Q96HZ7 61 aa7.94□□□□□ -1.14
VPS9D1-206ENST00000567379 GSN-AS1Q9NRJ2 163 aa7.94□□□□□ -1.14
VPS9D1-206ENST00000567379 GOLT1BQ9Y3E0 138 aa7.94□□□□□ -1.14
VPS9D1-206ENST00000567379 LOC389332A0A1B0GUA5 103 aa7.93□□□□□ -1.14
VPS9D1-206ENST00000567379 TNFRSF6BO95407 300 aa7.93□□□□□ -1.14
VPS9D1-206ENST00000567379 SHISA2Q6UWI4 295 aa7.93□□□□□ -1.14
VPS9D1-206ENST00000567379 FAM19A2Q8N3H0 131 aa7.93□□□□□ -1.14
VPS9D1-206ENST00000567379 SPXQ9BT56 116 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms