RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 TM4SF20Q53R12 229 aa17.64■□□□□ 0.41
LINC00543-201ENST00000567234 UBE2E2Q96LR5 201 aa17.63■□□□□ 0.41
LINC00543-201ENST00000567234 SMR3AQ99954 134 aa17.63■□□□□ 0.41
LINC00543-201ENST00000567234 MXRA5Q9NR99 2828 aa17.63■□□□□ 0.41
LINC00543-201ENST00000567234 OVOL1O14753 267 aa17.63■□□□□ 0.41
LINC00543-201ENST00000567234 HBDP02042 147 aa17.63■□□□□ 0.41
LINC00543-201ENST00000567234 LGALS1P09382 135 aaKnown RBP17.63■□□□□ 0.41
LINC00543-201ENST00000567234 SIGMAR1Q99720 223 aa17.63■□□□□ 0.41
LINC00543-201ENST00000567234 A0A1B0GV72 72 aa17.62■□□□□ 0.41
LINC00543-201ENST00000567234 FOXI2Q6ZQN5 318 aa17.61■□□□□ 0.41
LINC00543-201ENST00000567234 C20orf173Q96LM9 149 aa17.61■□□□□ 0.41
LINC00543-201ENST00000567234 LINC00477Q96M19 166 aa17.61■□□□□ 0.41
LINC00543-201ENST00000567234 SAMD5Q5TGI4 173 aa17.61■□□□□ 0.41
LINC00543-201ENST00000567234 A0A096LNJ9 63 aa17.6■□□□□ 0.41
LINC00543-201ENST00000567234 LYZL1Q6UWQ5 148 aa17.6■□□□□ 0.41
LINC00543-201ENST00000567234 LINC01546A6NGU7 62 aa17.59■□□□□ 0.41
LINC00543-201ENST00000567234 F8W1H4 67 aa17.59■□□□□ 0.41
LINC00543-201ENST00000567234 NCR2O95944 276 aa17.59■□□□□ 0.41
LINC00543-201ENST00000567234 IGLC6P0CF74 106 aa17.59■□□□□ 0.41
LINC00543-201ENST00000567234 TMSB15BA0A087X1C1 80 aa17.58■□□□□ 0.41
LINC00543-201ENST00000567234 H0Y8G0 127 aa17.58■□□□□ 0.41
LINC00543-201ENST00000567234 LGALS9O00182 355 aa17.58■□□□□ 0.41
LINC00543-201ENST00000567234 RPL11P62913 178 aaKnown RBP17.58■□□□□ 0.41
LINC00543-201ENST00000567234 ORMDL3Q8N138 153 aa17.58■□□□□ 0.41
LINC00543-201ENST00000567234 YAE1D1Q9NRH1 226 aa17.58■□□□□ 0.41
LINC00543-201ENST00000567234 ORM1P02763 201 aa17.58■□□□□ 0.4
LINC00543-201ENST00000567234 CSN3P07498 182 aa17.58■□□□□ 0.4
LINC00543-201ENST00000567234 CD300EQ496F6 205 aaPredicted RBP17.58■□□□□ 0.4
LINC00543-201ENST00000567234 ZNF575Q86XF7 245 aa17.58■□□□□ 0.4
LINC00543-201ENST00000567234 OR10J6PQ8NGY7 276 aa17.58■□□□□ 0.4
LINC00543-201ENST00000567234 TPPP3Q9BW30 176 aa17.58■□□□□ 0.4
LINC00543-201ENST00000567234 SETXQ7Z333 2677 aaKnown RBP17.57■□□□□ 0.4
LINC00543-201ENST00000567234 FAM104BQ5XKR9 115 aa17.57■□□□□ 0.4
LINC00543-201ENST00000567234 IFI27L1Q96BM0 104 aa17.57■□□□□ 0.4
LINC00543-201ENST00000567234 TMEM238LA0A1B0GVL6 79 aa17.56■□□□□ 0.4
LINC00543-201ENST00000567234 TMEM213A2RRL7 107 aa17.56■□□□□ 0.4
LINC00543-201ENST00000567234 TAL2Q16559 108 aa17.56■□□□□ 0.4
LINC00543-201ENST00000567234 CNFNQ9BYD5 112 aa17.56■□□□□ 0.4
LINC00543-201ENST00000567234 OR8A1Q8NGG7 326 aa17.56■□□□□ 0.4
LINC00543-201ENST00000567234 PRELID3AQ96N28 172 aa17.56■□□□□ 0.4
LINC00543-201ENST00000567234 TRBV7-9A0A0J9YWB2 115 aa17.55■□□□□ 0.4
LINC00543-201ENST00000567234 ID1P41134 155 aa17.55■□□□□ 0.4
LINC00543-201ENST00000567234 SPATA25Q9BR10 227 aa17.55■□□□□ 0.4
LINC00543-201ENST00000567234 TM2D2Q9BX73 214 aa17.55■□□□□ 0.4
LINC00543-201ENST00000567234 IFI27P40305 119 aaPredicted RBP17.54■□□□□ 0.4
LINC00543-201ENST00000567234 CACNG7P62955 275 aa17.54■□□□□ 0.4
LINC00543-201ENST00000567234 MCRIP2Q9BUT9 160 aaKnown RBP17.54■□□□□ 0.4
LINC00543-201ENST00000567234 ZMAT4Q9H898 229 aa17.54■□□□□ 0.4
LINC00543-201ENST00000567234 MTURNQ8N3F0 131 aa17.54■□□□□ 0.4
LINC00543-201ENST00000567234 CYSRT1A8MQ03 144 aa17.53■□□□□ 0.4
LINC00543-201ENST00000567234 DUX5Q96PT3 197 aa17.53■□□□□ 0.4
LINC00543-201ENST00000567234 ANK3Q12955 4377 aaKnown RBP17.52■□□□□ 0.4
LINC00543-201ENST00000567234 IGHV4OR15-8A0A075B7B6 117 aa17.52■□□□□ 0.4
LINC00543-201ENST00000567234 A0A087WW49 117 aa17.52■□□□□ 0.4
LINC00543-201ENST00000567234 DCANP1Q8TF63 244 aa17.52■□□□□ 0.4
LINC00543-201ENST00000567234 IGKV3D-20A0A0C4DH25 116 aa17.51■□□□□ 0.39
LINC00543-201ENST00000567234 SNAI2O43623 268 aa17.51■□□□□ 0.39
LINC00543-201ENST00000567234 TCTEX1D4Q5JR98 221 aa17.51■□□□□ 0.39
LINC00543-201ENST00000567234 FAM19A4Q96LR4 140 aa17.51■□□□□ 0.39
LINC00543-201ENST00000567234 LY6G6DO95868 133 aa17.51■□□□□ 0.39
LINC00543-201ENST00000567234 AZU1P20160 251 aa17.5■□□□□ 0.39
LINC00543-201ENST00000567234 EDN2P20800 178 aa17.5■□□□□ 0.39
LINC00543-201ENST00000567234 EVI2AP22794 236 aa17.5■□□□□ 0.39
LINC00543-201ENST00000567234 HOXD3P31249 432 aaPredicted RBP17.5■□□□□ 0.39
LINC00543-201ENST00000567234 ZFAND2AQ8N6M9 145 aa17.5■□□□□ 0.39
LINC00543-201ENST00000567234 C11orf21Q9P2W6 132 aa17.5■□□□□ 0.39
LINC00543-201ENST00000567234 HIVEP1P15822 2718 aa17.5■□□□□ 0.39
LINC00543-201ENST00000567234 TEX48A0A1B0GUV7 120 aa17.49■□□□□ 0.39
LINC00543-201ENST00000567234 D6R8Y8 96 aa17.49■□□□□ 0.39
LINC00543-201ENST00000567234 E9PLD3 99 aa17.49■□□□□ 0.39
LINC00543-201ENST00000567234 SYNJ2BPP57105 145 aa17.49■□□□□ 0.39
LINC00543-201ENST00000567234 APRG1Q8IVJ8 170 aa17.49■□□□□ 0.39
LINC00543-201ENST00000567234 PHLDA1Q8WV24 401 aaPredicted RBP17.49■□□□□ 0.39
LINC00543-201ENST00000567234 MTORP42345 2549 aa17.49■□□□□ 0.39
LINC00543-201ENST00000567234 IGKV3-7A0A075B6H7 116 aa17.49■□□□□ 0.39
LINC00543-201ENST00000567234 GAGE12HA6NDE8 117 aa17.49■□□□□ 0.39
LINC00543-201ENST00000567234 DNAJC9-AS1A6NH13 148 aa17.49■□□□□ 0.39
LINC00543-201ENST00000567234 LINC01619G3V211 115 aa17.49■□□□□ 0.39
LINC00543-201ENST00000567234 RPL24P83731 157 aaKnown RBP17.49■□□□□ 0.39
LINC00543-201ENST00000567234 TWIST1Q15672 202 aa17.49■□□□□ 0.39
LINC00543-201ENST00000567234 PRR31Q5SQ13 230 aa17.49■□□□□ 0.39
LINC00543-201ENST00000567234 CUBNO60494 3623 aa17.48■□□□□ 0.39
LINC00543-201ENST00000567234 ATP5LO75964 103 aa17.47■□□□□ 0.39
LINC00543-201ENST00000567234 TRAV21A0A0B4J279 112 aa17.47■□□□□ 0.39
LINC00543-201ENST00000567234 C4orf3Q8WVX3 66 aa17.47■□□□□ 0.39
LINC00543-201ENST00000567234 RAB37Q96AX2 223 aa17.47■□□□□ 0.39
LINC00543-201ENST00000567234 SPANXB1Q9NS25 103 aaPredicted RBP17.47■□□□□ 0.39
LINC00543-201ENST00000567234 SRD5A1P18405 259 aa17.46■□□□□ 0.39
LINC00543-201ENST00000567234 NMUP48645 174 aa17.46■□□□□ 0.39
LINC00543-201ENST00000567234 PRR9Q5T870 116 aa17.46■□□□□ 0.39
LINC00543-201ENST00000567234 Q6ZSV7 163 aa17.46■□□□□ 0.39
LINC00543-201ENST00000567234 WFDC12Q8WWY7 111 aa17.46■□□□□ 0.39
LINC00543-201ENST00000567234 CHAC1Q9BUX1 264 aa17.46■□□□□ 0.39
LINC00543-201ENST00000567234 NXT2Q9NPJ8 142 aaKnown RBP17.46■□□□□ 0.39
LINC00543-201ENST00000567234 TIMM8BQ9Y5J9 83 aaPredicted RBP17.46■□□□□ 0.39
LINC00543-201ENST00000567234 SCGB2A2Q13296 93 aa17.45■□□□□ 0.38
LINC00543-201ENST00000567234 PCP2Q8IVA1 136 aa17.45■□□□□ 0.38
LINC00543-201ENST00000567234 MRPL51Q4U2R6 128 aaKnown RBP17.44■□□□□ 0.38
LINC00543-201ENST00000567234 CEND1Q8N111 149 aa17.44■□□□□ 0.38
LINC00543-201ENST00000567234 HIVEP2P31629 2446 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms