RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 OXTP01178 125 aa10.14□□□□□ -0.79
PALB2-205ENST00000567003 KCNS1Q96KK3 526 aa10.14□□□□□ -0.79
PALB2-205ENST00000567003 MBD2Q9UBB5 411 aa10.14□□□□□ -0.79
PALB2-205ENST00000567003 TNXBP22105 4242 aa10.13□□□□□ -0.79
PALB2-205ENST00000567003 C9orf85Q96MD7 179 aa10.13□□□□□ -0.79
PALB2-205ENST00000567003 IGLV2-8P01709 118 aa10.12□□□□□ -0.79
PALB2-205ENST00000567003 LINC00694P0DN24 101 aa10.12□□□□□ -0.79
PALB2-205ENST00000567003 TAS2R45P59539 299 aa10.12□□□□□ -0.79
PALB2-205ENST00000567003 SMIM3Q9BZL3 60 aa10.12□□□□□ -0.79
PALB2-205ENST00000567003 IGKV2D-24A0A075B6R9 120 aa10.11□□□□□ -0.79
PALB2-205ENST00000567003 GGTLC3B5MD39 225 aa10.11□□□□□ -0.79
PALB2-205ENST00000567003 HMGB3O15347 200 aaKnown RBP10.11□□□□□ -0.79
PALB2-205ENST00000567003 MGST1P10620 155 aaKnown RBP10.11□□□□□ -0.79
PALB2-205ENST00000567003 HNRNPA3P51991 378 aaKnown RBP10.11□□□□□ -0.79
PALB2-205ENST00000567003 SAMD10Q9BYL1 202 aa10.11□□□□□ -0.79
PALB2-205ENST00000567003 FAM240BA0A1B0GVZ2 78 aa10.1□□□□□ -0.79
PALB2-205ENST00000567003 CIDEAO60543 219 aa10.1□□□□□ -0.79
PALB2-205ENST00000567003 RNASE3P12724 160 aaKnown RBP10.1□□□□□ -0.79
PALB2-205ENST00000567003 FAM74A1Q5RGS3 127 aa10.1□□□□□ -0.79
PALB2-205ENST00000567003 OR2T35Q8NGX2 323 aa10.1□□□□□ -0.79
PALB2-205ENST00000567003 PARLQ9H300 379 aa10.1□□□□□ -0.79
PALB2-205ENST00000567003 RNF222A6NCQ9 220 aa10.09□□□□□ -0.79
PALB2-205ENST00000567003 GCGP01275 180 aa10.09□□□□□ -0.79
PALB2-205ENST00000567003 RAB2AP61019 212 aa10.09□□□□□ -0.79
PALB2-205ENST00000567003 TOR2AQ5JU69 321 aa10.09□□□□□ -0.79
PALB2-205ENST00000567003 C14orf178Q8N769 122 aaPredicted RBP10.09□□□□□ -0.79
PALB2-205ENST00000567003 Q8N976 141 aa10.09□□□□□ -0.79
PALB2-205ENST00000567003 JPT2Q9H910 190 aa10.09□□□□□ -0.79
PALB2-205ENST00000567003 NDFIP1Q9BT67 221 aa10.08□□□□□ -0.8
PALB2-205ENST00000567003 KLK12Q9UKR0 248 aa10.08□□□□□ -0.8
PALB2-205ENST00000567003 HSPB11Q9Y547 144 aa10.08□□□□□ -0.8
PALB2-205ENST00000567003 TAAR5O14804 337 aa10.07□□□□□ -0.8
PALB2-205ENST00000567003 RPL37AP61513 92 aaKnown RBP10.07□□□□□ -0.8
PALB2-205ENST00000567003 ASAH1Q13510 395 aa10.07□□□□□ -0.8
PALB2-205ENST00000567003 LGALSLQ3ZCW2 172 aaPredicted RBP10.07□□□□□ -0.8
PALB2-205ENST00000567003 CYB561D1Q8N8Q1 229 aa10.07□□□□□ -0.8
PALB2-205ENST00000567003 SCGB1C1Q8TD33 95 aa10.07□□□□□ -0.8
PALB2-205ENST00000567003 UBE2WQ96B02 151 aa10.07□□□□□ -0.8
PALB2-205ENST00000567003 RMI2Q96E14 147 aa10.07□□□□□ -0.8
PALB2-205ENST00000567003 WFDC1Q9HC57 220 aa10.07□□□□□ -0.8
PALB2-205ENST00000567003 PSG8Q9UQ74 426 aa10.07□□□□□ -0.8
PALB2-205ENST00000567003 PQLC2Q6ZP29 291 aa10.06□□□□□ -0.8
PALB2-205ENST00000567003 PRNTQ86SH4 94 aa10.06□□□□□ -0.8
PALB2-205ENST00000567003 NIT1Q86X76 327 aa10.06□□□□□ -0.8
PALB2-205ENST00000567003 PTH2Q96A98 100 aa10.06□□□□□ -0.8
PALB2-205ENST00000567003 DAZAP1Q96EP5 407 aaKnown RBP10.06□□□□□ -0.8
PALB2-205ENST00000567003 COX11Q9Y6N1 276 aa10.06□□□□□ -0.8
PALB2-205ENST00000567003 LRP2P98164 4655 aa10.06□□□□□ -0.8
PALB2-205ENST00000567003 IGLV2-11P01706 119 aa10.05□□□□□ -0.8
PALB2-205ENST00000567003 TCRAP04437 139 aa10.05□□□□□ -0.8
PALB2-205ENST00000567003 ARL14EPLP0DKL9 152 aa10.05□□□□□ -0.8
PALB2-205ENST00000567003 ACOT6Q3I5F7 207 aaPredicted RBP10.05□□□□□ -0.8
PALB2-205ENST00000567003 UFSP1Q6NVU6 142 aa10.05□□□□□ -0.8
PALB2-205ENST00000567003 ARL6IP6Q8N6S5 226 aa10.05□□□□□ -0.8
PALB2-205ENST00000567003 PPP1R1CQ8WVI7 109 aa10.05□□□□□ -0.8
PALB2-205ENST00000567003 LINC00479Q96M42 142 aa10.05□□□□□ -0.8
PALB2-205ENST00000567003 URGCP-MRPS24S4R325 110 aa10.05□□□□□ -0.8
PALB2-205ENST00000567003 IGKV3D-20A0A0C4DH25 116 aa10.04□□□□□ -0.8
PALB2-205ENST00000567003 A0A1W2PPV4 95 aa10.04□□□□□ -0.8
PALB2-205ENST00000567003 H2BFSP57053 126 aa10.04□□□□□ -0.8
PALB2-205ENST00000567003 SMUG1Q53HV7 270 aa10.04□□□□□ -0.8
PALB2-205ENST00000567003 ZFP2Q6ZN57 461 aa10.04□□□□□ -0.8
PALB2-205ENST00000567003 A0A087WWC5 75 aa10.03□□□□□ -0.8
PALB2-205ENST00000567003 A8MWV9 139 aa10.03□□□□□ -0.8
PALB2-205ENST00000567003 FLI1Q01543 452 aaPredicted RBP10.03□□□□□ -0.8
PALB2-205ENST00000567003 C5orf17Q8NAS9 161 aa10.03□□□□□ -0.8
PALB2-205ENST00000567003 CCDC32Q9BV29 185 aa10.03□□□□□ -0.8
PALB2-205ENST00000567003 S100A4P26447 101 aaKnown RBP10.02□□□□□ -0.81
PALB2-205ENST00000567003 RPL12P30050 165 aaKnown RBP10.02□□□□□ -0.81
PALB2-205ENST00000567003 ZFP69Q49AA0 526 aa10.02□□□□□ -0.81
PALB2-205ENST00000567003 MZT2BQ6NZ67 158 aa10.02□□□□□ -0.81
PALB2-205ENST00000567003 OR10G9Q8NGN4 311 aa10.02□□□□□ -0.81
PALB2-205ENST00000567003 OR10G7Q8NGN6 311 aa10.02□□□□□ -0.81
PALB2-205ENST00000567003 SH3BGRL3Q9H299 93 aa10.02□□□□□ -0.81
PALB2-205ENST00000567003 SERTM2A0A1B0GWG4 89 aa10.01□□□□□ -0.81
PALB2-205ENST00000567003 H3BVH4 76 aa10.01□□□□□ -0.81
PALB2-205ENST00000567003 MPC2O95563 127 aa10.01□□□□□ -0.81
PALB2-205ENST00000567003 MT1HL1P0DM35 61 aa10.01□□□□□ -0.81
PALB2-205ENST00000567003 FGF8P55075 233 aaPredicted RBP10.01□□□□□ -0.81
PALB2-205ENST00000567003 FAM74A4Q5TZK3 123 aa10.01□□□□□ -0.81
PALB2-205ENST00000567003 A0A087WX48 190 aa10□□□□□ -0.81
PALB2-205ENST00000567003 TRAV34A0A0B4J273 112 aa10□□□□□ -0.81
PALB2-205ENST00000567003 GCHFRP30047 84 aa10□□□□□ -0.81
PALB2-205ENST00000567003 ASIPP42127 132 aa10□□□□□ -0.81
PALB2-205ENST00000567003 CDC34P49427 236 aaPredicted RBP10□□□□□ -0.81
PALB2-205ENST00000567003 CYCSP99999 105 aaKnown RBP10□□□□□ -0.81
PALB2-205ENST00000567003 ATRAIDQ6UW56 229 aa10□□□□□ -0.81
PALB2-205ENST00000567003 ENKURQ8TC29 256 aa10□□□□□ -0.81
PALB2-205ENST00000567003 A0A087WWL8 130 aa9.99□□□□□ -0.81
PALB2-205ENST00000567003 K7EQM0 130 aa9.99□□□□□ -0.81
PALB2-205ENST00000567003 STAG3L2P0CL84 134 aa9.99□□□□□ -0.81
PALB2-205ENST00000567003 STAG3L3P0CL85 134 aa9.99□□□□□ -0.81
PALB2-205ENST00000567003 SUMO1P63165 101 aaKnown RBP9.99□□□□□ -0.81
PALB2-205ENST00000567003 OR2G3Q8NGZ4 309 aa9.99□□□□□ -0.81
PALB2-205ENST00000567003 EPDR1Q9UM22 224 aa9.99□□□□□ -0.81
PALB2-205ENST00000567003 RNF213Q63HN8 5207 aa9.99□□□□□ -0.81
PALB2-205ENST00000567003 PANO1I0J062 215 aa9.98□□□□□ -0.81
PALB2-205ENST00000567003 SEC11BP0C7V7 166 aa9.98□□□□□ -0.81
PALB2-205ENST00000567003 ENHOQ6UWT2 76 aa9.98□□□□□ -0.81
PALB2-205ENST00000567003 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms