RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 KCNIP2Q9NS61 270 aa10.67□□□□□ -0.7
CDH3-205ENST00000566808 Q9UF83 564 aa10.67□□□□□ -0.7
CDH3-205ENST00000566808 FLVCR2Q9UPI3 526 aa10.67□□□□□ -0.7
CDH3-205ENST00000566808 KRTAP9-6A0A140TA67 174 aa10.66□□□□□ -0.7
CDH3-205ENST00000566808 IGSF23A1L1A6 192 aa10.66□□□□□ -0.7
CDH3-205ENST00000566808 ATP6V1FQ16864 119 aa10.66□□□□□ -0.7
CDH3-205ENST00000566808 OR2T35Q8NGX2 323 aa10.66□□□□□ -0.7
CDH3-205ENST00000566808 CMTM2Q8TAZ6 248 aa10.66□□□□□ -0.7
CDH3-205ENST00000566808 TVP23CQ96ET8 276 aa10.66□□□□□ -0.7
CDH3-205ENST00000566808 HYLS1Q96M11 299 aa10.66□□□□□ -0.7
CDH3-205ENST00000566808 SAMD10Q9BYL1 202 aa10.66□□□□□ -0.7
CDH3-205ENST00000566808 V9GYH0 126 aa10.66□□□□□ -0.7
CDH3-205ENST00000566808 CCSO14618 274 aa10.65□□□□□ -0.7
CDH3-205ENST00000566808 PIK3CD-AS1Q5SR53 167 aa10.65□□□□□ -0.7
CDH3-205ENST00000566808 WDR73Q6P4I2 378 aa10.65□□□□□ -0.7
CDH3-205ENST00000566808 ENHOQ6UWT2 76 aa10.65□□□□□ -0.7
CDH3-205ENST00000566808 TMEM252Q8N6L7 170 aa10.65□□□□□ -0.7
CDH3-205ENST00000566808 C14orf178Q8N769 122 aaPredicted RBP10.65□□□□□ -0.7
CDH3-205ENST00000566808 C11orf21Q9P2W6 132 aa10.65□□□□□ -0.7
CDH3-205ENST00000566808 LPAP08519 4548 aa10.64□□□□□ -0.71
CDH3-205ENST00000566808 PHOX2AO14813 284 aa10.64□□□□□ -0.71
CDH3-205ENST00000566808 RNASE3P12724 160 aaKnown RBP10.64□□□□□ -0.71
CDH3-205ENST00000566808 GOLT1AQ6ZVE7 132 aa10.64□□□□□ -0.71
CDH3-205ENST00000566808 THAP6Q8TBB0 222 aa10.64□□□□□ -0.71
CDH3-205ENST00000566808 C7orf33Q8WU49 177 aa10.64□□□□□ -0.71
CDH3-205ENST00000566808 NMES1Q9C002 83 aa10.64□□□□□ -0.71
CDH3-205ENST00000566808 OTORQ9NRC9 128 aa10.64□□□□□ -0.71
CDH3-205ENST00000566808 KIF25-AS1Q9Y6Z4 181 aa10.64□□□□□ -0.71
CDH3-205ENST00000566808 A0A087WYN8 130 aa10.63□□□□□ -0.71
CDH3-205ENST00000566808 NAP1L6A6NFF2 107 aa10.63□□□□□ -0.71
CDH3-205ENST00000566808 FAM74A1Q5RGS3 127 aa10.63□□□□□ -0.71
CDH3-205ENST00000566808 OR10G7Q8NGN6 311 aa10.63□□□□□ -0.71
CDH3-205ENST00000566808 BCL7BQ9BQE9 202 aa10.63□□□□□ -0.71
CDH3-205ENST00000566808 NDFIP1Q9BT67 221 aa10.63□□□□□ -0.71
CDH3-205ENST00000566808 MUC2Q02817 5179 aa10.62□□□□□ -0.71
CDH3-205ENST00000566808 TAAR5O14804 337 aa10.62□□□□□ -0.71
CDH3-205ENST00000566808 KRTAP10-8P60410 259 aa10.62□□□□□ -0.71
CDH3-205ENST00000566808 MIAQ16674 131 aa10.62□□□□□ -0.71
CDH3-205ENST00000566808 KHDC3LQ587J8 217 aa10.62□□□□□ -0.71
CDH3-205ENST00000566808 UFSP1Q6NVU6 142 aa10.62□□□□□ -0.71
CDH3-205ENST00000566808 ARL6IP6Q8N6S5 226 aa10.62□□□□□ -0.71
CDH3-205ENST00000566808 SPACA4Q8TDM5 124 aa10.62□□□□□ -0.71
CDH3-205ENST00000566808 FAT4Q6V0I7 4981 aa10.61□□□□□ -0.71
CDH3-205ENST00000566808 FAM25EA8MYX2 175 aa10.61□□□□□ -0.71
CDH3-205ENST00000566808 RHODO00212 210 aa10.61□□□□□ -0.71
CDH3-205ENST00000566808 S100A10P60903 97 aa10.61□□□□□ -0.71
CDH3-205ENST00000566808 CNBPP62633 177 aaKnown RBP10.61□□□□□ -0.71
CDH3-205ENST00000566808 LGALSLQ3ZCW2 172 aaPredicted RBP10.61□□□□□ -0.71
CDH3-205ENST00000566808 C15orf54Q8N8G6 183 aa10.61□□□□□ -0.71
CDH3-205ENST00000566808 TMEM75Q8N9X5 138 aa10.61□□□□□ -0.71
CDH3-205ENST00000566808 OR2G3Q8NGZ4 309 aa10.61□□□□□ -0.71
CDH3-205ENST00000566808 MRPS26Q9BYN8 205 aaKnown RBP10.61□□□□□ -0.71
CDH3-205ENST00000566808 ZNF80P51504 273 aaPredicted RBP10.6□□□□□ -0.71
CDH3-205ENST00000566808 PRR3P79522 188 aaKnown RBP10.6□□□□□ -0.71
CDH3-205ENST00000566808 REG3GQ6UW15 175 aa10.6□□□□□ -0.71
CDH3-205ENST00000566808 CLRN3Q8NCR9 226 aa10.6□□□□□ -0.71
CDH3-205ENST00000566808 PLAC8Q9NZF1 115 aa10.6□□□□□ -0.71
CDH3-205ENST00000566808 IGHV3-64A0A075B6Q5 118 aa10.59□□□□□ -0.71
CDH3-205ENST00000566808 TMEM262E9PQX1 116 aa10.59□□□□□ -0.71
CDH3-205ENST00000566808 ANGP03950 147 aaKnown RBP10.59□□□□□ -0.71
CDH3-205ENST00000566808 TAS2R45P59539 299 aa10.59□□□□□ -0.71
CDH3-205ENST00000566808 MPV17L2Q567V2 206 aa10.59□□□□□ -0.71
CDH3-205ENST00000566808 DPH3Q96FX2 82 aa10.59□□□□□ -0.71
CDH3-205ENST00000566808 OR5AC2Q9NZP5 309 aa10.59□□□□□ -0.71
CDH3-205ENST00000566808 GCGP01275 180 aa10.58□□□□□ -0.72
CDH3-205ENST00000566808 CHTF8P0CG12 524 aa10.58□□□□□ -0.72
CDH3-205ENST00000566808 TMBIM6P55061 237 aa10.58□□□□□ -0.72
CDH3-205ENST00000566808 A0A0U1RQV1 116 aa10.57□□□□□ -0.72
CDH3-205ENST00000566808 ZFP69Q49AA0 526 aa10.57□□□□□ -0.72
CDH3-205ENST00000566808 OR5C1Q8NGR4 320 aa10.57□□□□□ -0.72
CDH3-205ENST00000566808 JPT2Q9H910 190 aa10.57□□□□□ -0.72
CDH3-205ENST00000566808 SERTM2A0A1B0GWG4 89 aa10.56□□□□□ -0.72
CDH3-205ENST00000566808 C17orf112F2Z3M2 114 aa10.56□□□□□ -0.72
CDH3-205ENST00000566808 S100A4P26447 101 aaKnown RBP10.56□□□□□ -0.72
CDH3-205ENST00000566808 BTCP35070 178 aa10.56□□□□□ -0.72
CDH3-205ENST00000566808 PKIAP61925 76 aa10.56□□□□□ -0.72
CDH3-205ENST00000566808 GNG5P63218 68 aa10.56□□□□□ -0.72
CDH3-205ENST00000566808 RAB32Q13637 225 aa10.56□□□□□ -0.72
CDH3-205ENST00000566808 WDR61Q9GZS3 305 aaKnown RBP10.56□□□□□ -0.72
CDH3-205ENST00000566808 MBD2Q9UBB5 411 aa10.56□□□□□ -0.72
CDH3-205ENST00000566808 TRBV6-8A0A0A6YYG3 113 aa10.55□□□□□ -0.72
CDH3-205ENST00000566808 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.55□□□□□ -0.72
CDH3-205ENST00000566808 TRBV10-1A0A0K0K1A3 114 aa10.55□□□□□ -0.72
CDH3-205ENST00000566808 NOL3O60936 208 aaKnown RBP10.55□□□□□ -0.72
CDH3-205ENST00000566808 UBE2D3P61077 147 aa10.55□□□□□ -0.72
CDH3-205ENST00000566808 UBE2D2P62837 147 aa10.55□□□□□ -0.72
CDH3-205ENST00000566808 RPL36AP83881 106 aaKnown RBP10.55□□□□□ -0.72
CDH3-205ENST00000566808 FAM74A4Q5TZK3 123 aa10.55□□□□□ -0.72
CDH3-205ENST00000566808 TRIQKQ629K1 86 aa10.55□□□□□ -0.72
CDH3-205ENST00000566808 KRTAP26-1Q6PEX3 210 aa10.55□□□□□ -0.72
CDH3-205ENST00000566808 RPL36ALQ969Q0 106 aaKnown RBP10.55□□□□□ -0.72
CDH3-205ENST00000566808 hDV102S1A0JD36 115 aa10.54□□□□□ -0.72
CDH3-205ENST00000566808 H3BMQ9 156 aa10.54□□□□□ -0.72
CDH3-205ENST00000566808 S100A5P33763 92 aa10.54□□□□□ -0.72
CDH3-205ENST00000566808 CNPY1Q3B7I2 92 aa10.54□□□□□ -0.72
CDH3-205ENST00000566808 SMUG1Q53HV7 270 aa10.54□□□□□ -0.72
CDH3-205ENST00000566808 SPINK6Q6UWN8 80 aa10.54□□□□□ -0.72
CDH3-205ENST00000566808 SGK494Q96LW2 274 aa10.54□□□□□ -0.72
CDH3-205ENST00000566808 PRR34Q9NV39 138 aa10.54□□□□□ -0.72
CDH3-205ENST00000566808 TRBV7-3A0A075B6L6 115 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms