RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 PTH2Q96A98 100 aa6.52□□□□□ -1.37
SMPD3-207ENST00000566466 KCNS1Q96KK3 526 aa6.52□□□□□ -1.37
SMPD3-207ENST00000566466 C18orf15Q96N68 181 aa6.52□□□□□ -1.37
SMPD3-207ENST00000566466 SEC11CQ9BY50 192 aa6.52□□□□□ -1.37
SMPD3-207ENST00000566466 RPP21Q9H633 154 aaKnown RBP6.52□□□□□ -1.37
SMPD3-207ENST00000566466 OSTCQ9NRP0 149 aa6.52□□□□□ -1.37
SMPD3-207ENST00000566466 IL36BQ9NZH7 164 aa6.52□□□□□ -1.37
SMPD3-207ENST00000566466 LYRM9A8MSI8 78 aa6.51□□□□□ -1.37
SMPD3-207ENST00000566466 P01737 135 aa6.51□□□□□ -1.37
SMPD3-207ENST00000566466 MED14OSP0DP75 135 aa6.51□□□□□ -1.37
SMPD3-207ENST00000566466 CTRLP40313 264 aa6.51□□□□□ -1.37
SMPD3-207ENST00000566466 ADIRFQ15847 76 aa6.51□□□□□ -1.37
SMPD3-207ENST00000566466 CT83Q5H943 113 aa6.51□□□□□ -1.37
SMPD3-207ENST00000566466 OR2D3Q8NGH3 330 aa6.51□□□□□ -1.37
SMPD3-207ENST00000566466 OR10AG1Q8NH19 301 aa6.51□□□□□ -1.37
SMPD3-207ENST00000566466 RASL10AQ92737 203 aa6.51□□□□□ -1.37
SMPD3-207ENST00000566466 SFRP2Q96HF1 295 aa6.51□□□□□ -1.37
SMPD3-207ENST00000566466 CNFNQ9BYD5 112 aa6.51□□□□□ -1.37
SMPD3-207ENST00000566466 JPT2Q9H910 190 aa6.51□□□□□ -1.37
SMPD3-207ENST00000566466 TIMM8BQ9Y5J9 83 aaPredicted RBP6.51□□□□□ -1.37
SMPD3-207ENST00000566466 DNAH1Q9P2D7 4330 aa6.5□□□□□ -1.37
SMPD3-207ENST00000566466 OR5AL1P0C617 328 aa6.5□□□□□ -1.37
SMPD3-207ENST00000566466 HOXA5P20719 270 aa6.5□□□□□ -1.37
SMPD3-207ENST00000566466 ASIPP42127 132 aa6.5□□□□□ -1.37
SMPD3-207ENST00000566466 ALMS1Q8TCU4 4167 aa6.5□□□□□ -1.37
SMPD3-207ENST00000566466 NACAE9PAV3 2078 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 MUC21A0A0G2JKD1 596 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 MUC21A0A140T8X8 626 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 GAGE12BA1L429 117 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 SNURFLB1AK76 121 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 F8W036 122 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 M0R2P5 195 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 GAGE7O76087 117 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 GAGE12FP0CL80 117 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 GAGE12GP0CL81 117 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 GAGE12IP0CL82 117 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 SPART-AS1P0CW21 52 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 FOXA3P55318 350 aaPredicted RBP6.49□□□□□ -1.37
SMPD3-207ENST00000566466 LINC00315P59091 139 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 ERVFC1-1P60608 527 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 PNRC1Q12796 327 aaPredicted RBP6.49□□□□□ -1.37
SMPD3-207ENST00000566466 LGALS9BQ3B8N2 356 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 RNF212Q495C1 297 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 ZNF479Q96JC4 524 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 SPXQ9BT56 116 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 KIF25-AS1Q9Y6Z4 181 aa6.49□□□□□ -1.37
SMPD3-207ENST00000566466 IGHV4-4A0A075B6R2 117 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 TRGV1A0A0A0MS02 117 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 SMIM27A0A1W2PRY6 76 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 CXorf65A6NEN9 183 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 GATCO43716 136 aaKnown RBP6.48□□□□□ -1.37
SMPD3-207ENST00000566466 EIF4EBP3O60516 100 aaPredicted RBP6.48□□□□□ -1.37
SMPD3-207ENST00000566466 DEFB130BP0DP73 79 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 DEFB130AP0DP74 79 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 LORP23490 312 aaPredicted RBP6.48□□□□□ -1.37
SMPD3-207ENST00000566466 ATRAIDQ6UW56 229 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 LYZL1Q6UWQ5 148 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 Q6ZSN1 163 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 OR10G8Q8NGN5 311 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 C11orf45Q8TAV5 145 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 TSKUQ8WUA8 353 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 LYSTQ99698 3801 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 SAMD10Q9BYL1 202 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 BIN3Q9NQY0 253 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 MSRB1Q9NZV6 116 aa6.48□□□□□ -1.37
SMPD3-207ENST00000566466 RS1O15537 224 aa6.47□□□□□ -1.37
SMPD3-207ENST00000566466 CRYGDP07320 174 aa6.47□□□□□ -1.37
SMPD3-207ENST00000566466 RPS20P60866 119 aaKnown RBP6.47□□□□□ -1.37
SMPD3-207ENST00000566466 FHL2Q14192 279 aa6.47□□□□□ -1.37
SMPD3-207ENST00000566466 PIK3CD-AS1Q5SR53 167 aa6.47□□□□□ -1.37
SMPD3-207ENST00000566466 CFAP126Q5VTH2 177 aa6.47□□□□□ -1.37
SMPD3-207ENST00000566466 FER1L6-AS1Q8NA97 138 aa6.47□□□□□ -1.37
SMPD3-207ENST00000566466 DAZAP1Q96EP5 407 aaKnown RBP6.47□□□□□ -1.37
SMPD3-207ENST00000566466 WWC2-AS2Q96NR7 200 aa6.47□□□□□ -1.37
SMPD3-207ENST00000566466 GFRA4Q9GZZ7 299 aa6.47□□□□□ -1.37
SMPD3-207ENST00000566466 TEX48A0A1B0GUV7 120 aa6.46□□□□□ -1.38
SMPD3-207ENST00000566466 FAM231BA6NCW3 169 aa6.46□□□□□ -1.38
SMPD3-207ENST00000566466 HIGD1CA8MV81 97 aa6.46□□□□□ -1.38
SMPD3-207ENST00000566466 DAD1P61803 113 aa6.46□□□□□ -1.38
SMPD3-207ENST00000566466 ZNF876PQ49A33 203 aa6.46□□□□□ -1.38
SMPD3-207ENST00000566466 CLRN3Q8NCR9 226 aa6.46□□□□□ -1.38
SMPD3-207ENST00000566466 NUP35Q8NFH5 326 aa6.46□□□□□ -1.38
SMPD3-207ENST00000566466 MUC7Q8TAX7 377 aa6.46□□□□□ -1.38
SMPD3-207ENST00000566466 PHLDA1Q8WV24 401 aaPredicted RBP6.46□□□□□ -1.38
SMPD3-207ENST00000566466 VSIG2Q96IQ7 327 aa6.46□□□□□ -1.38
SMPD3-207ENST00000566466 NDUFAF3Q9BU61 184 aa6.46□□□□□ -1.38
SMPD3-207ENST00000566466 Q9UF83 564 aa6.46□□□□□ -1.38
SMPD3-207ENST00000566466 DNAH6Q9C0G6 4158 aa6.46□□□□□ -1.38
SMPD3-207ENST00000566466 VPS13DQ5THJ4 4388 aa6.46□□□□□ -1.38
SMPD3-207ENST00000566466 TRAV4A0A0B4J268 109 aa6.45□□□□□ -1.38
SMPD3-207ENST00000566466 A0A1B0GXF2 115 aa6.45□□□□□ -1.38
SMPD3-207ENST00000566466 A0A1W2PPQ1 181 aa6.45□□□□□ -1.38
SMPD3-207ENST00000566466 C7orf77A4D0Y5 90 aa6.45□□□□□ -1.38
SMPD3-207ENST00000566466 A8MWL6 223 aa6.45□□□□□ -1.38
SMPD3-207ENST00000566466 M0R381 172 aa6.45□□□□□ -1.38
SMPD3-207ENST00000566466 IGHV3-53P01767 116 aa6.45□□□□□ -1.38
SMPD3-207ENST00000566466 S100A4P26447 101 aaKnown RBP6.45□□□□□ -1.38
SMPD3-207ENST00000566466 ZFP82Q8N141 532 aa6.45□□□□□ -1.38
SMPD3-207ENST00000566466 PGLYRP4Q96LB8 373 aa6.45□□□□□ -1.38
SMPD3-207ENST00000566466 YPEL4Q96NS1 127 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms