RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 LY96Q9Y6Y9 160 aa9.93□□□□□ -0.82
FANCA-220ENST00000566409 FABP5P3A8MUU1 101 aa9.92□□□□□ -0.82
FANCA-220ENST00000566409 DNAH10OSP0CZ25 163 aa9.92□□□□□ -0.82
FANCA-220ENST00000566409 ZNF345Q14585 488 aa9.92□□□□□ -0.82
FANCA-220ENST00000566409 Q6ZSN1 163 aa9.92□□□□□ -0.82
FANCA-220ENST00000566409 COX8CQ7Z4L0 72 aa9.92□□□□□ -0.82
FANCA-220ENST00000566409 TRBV6-4A0A1B0GX49 114 aa9.91□□□□□ -0.82
FANCA-220ENST00000566409 HMSDA8MTL9 139 aa9.91□□□□□ -0.82
FANCA-220ENST00000566409 CDK2AP2O75956 126 aa9.91□□□□□ -0.82
FANCA-220ENST00000566409 PPT1P50897 306 aa9.91□□□□□ -0.82
FANCA-220ENST00000566409 TIRAPP58753 221 aa9.91□□□□□ -0.82
FANCA-220ENST00000566409 NHLRC2Q8NBF2 726 aa9.91□□□□□ -0.82
FANCA-220ENST00000566409 KRBOX1C9JBD0 128 aa9.9□□□□□ -0.82
FANCA-220ENST00000566409 FUSP35637 526 aaKnown RBP eCLIP9.9□□□□□ -0.82
FANCA-220ENST00000566409 JPT2Q9H910 190 aa9.9□□□□□ -0.82
FANCA-220ENST00000566409 TRAV9-2A0A087WT02 112 aa9.89□□□□□ -0.83
FANCA-220ENST00000566409 TRBV6-1A0A0K0K1D8 114 aa9.89□□□□□ -0.83
FANCA-220ENST00000566409 CIDEAO60543 219 aa9.89□□□□□ -0.83
FANCA-220ENST00000566409 SH2D1AO60880 128 aa9.89□□□□□ -0.83
FANCA-220ENST00000566409 SEC11BP0C7V7 166 aa9.89□□□□□ -0.83
FANCA-220ENST00000566409 CST9LP1Q5W188 147 aa9.89□□□□□ -0.83
FANCA-220ENST00000566409 UFSP1Q6NVU6 142 aa9.89□□□□□ -0.83
FANCA-220ENST00000566409 SH2D6Q7Z4S9 175 aa9.89□□□□□ -0.83
FANCA-220ENST00000566409 MBD3L1Q8WWY6 194 aa9.89□□□□□ -0.83
FANCA-220ENST00000566409 PARLQ9H300 379 aa9.89□□□□□ -0.83
FANCA-220ENST00000566409 MSRB1Q9NZV6 116 aa9.89□□□□□ -0.83
FANCA-220ENST00000566409 Q9UF83 564 aa9.89□□□□□ -0.83
FANCA-220ENST00000566409 ZFP30Q9Y2G7 519 aa9.89□□□□□ -0.83
FANCA-220ENST00000566409 B4DEV8 164 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 K7EP13 123 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 M0R036 132 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 PAGE4O60829 102 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 LTAP01374 205 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 EVI2AP22794 236 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 S100A4P26447 101 aaKnown RBP9.88□□□□□ -0.83
FANCA-220ENST00000566409 ASIPP42127 132 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 RHOHQ15669 191 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 ZNF674Q2M3X9 581 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 DNLZQ5SXM8 178 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 DMRTA1Q5VZB9 504 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 SFT2D1Q8WV19 159 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 FMC1Q96HJ9 113 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 SAMD10Q9BYL1 202 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 IL36BQ9NZH7 164 aa9.88□□□□□ -0.83
FANCA-220ENST00000566409 A0A0D9SG52 128 aa9.87□□□□□ -0.83
FANCA-220ENST00000566409 A0A1B0GV50 99 aa9.87□□□□□ -0.83
FANCA-220ENST00000566409 GRIFINA4D1Z8 144 aa9.87□□□□□ -0.83
FANCA-220ENST00000566409 H3BVH4 76 aa9.87□□□□□ -0.83
FANCA-220ENST00000566409 BCL2L11O43521 198 aa9.87□□□□□ -0.83
FANCA-220ENST00000566409 CRYGDP07320 174 aa9.87□□□□□ -0.83
FANCA-220ENST00000566409 MGST1P10620 155 aaKnown RBP9.87□□□□□ -0.83
FANCA-220ENST00000566409 PIK3CD-AS1Q5SR53 167 aa9.87□□□□□ -0.83
FANCA-220ENST00000566409 ZFP2Q6ZN57 461 aa9.87□□□□□ -0.83
FANCA-220ENST00000566409 NFE4Q86UQ8 179 aa9.87□□□□□ -0.83
FANCA-220ENST00000566409 STOML3Q8TAV4 291 aa9.87□□□□□ -0.83
FANCA-220ENST00000566409 FAM213BQ8TBF2 198 aa9.87□□□□□ -0.83
FANCA-220ENST00000566409 PRADC1Q9BSG0 188 aa9.87□□□□□ -0.83
FANCA-220ENST00000566409 ZNF471Q9BX82 626 aaPredicted RBP9.87□□□□□ -0.83
FANCA-220ENST00000566409 A0A087WTM6 91 aa9.86□□□□□ -0.83
FANCA-220ENST00000566409 IGHV3-38A0A0C4DH36 116 aa9.86□□□□□ -0.83
FANCA-220ENST00000566409 A8MWV9 139 aa9.86□□□□□ -0.83
FANCA-220ENST00000566409 UMAD1C9J7I0 102 aa9.86□□□□□ -0.83
FANCA-220ENST00000566409 ARMS2P0C7Q2 107 aa9.86□□□□□ -0.83
FANCA-220ENST00000566409 LINC00694P0DN24 101 aa9.86□□□□□ -0.83
FANCA-220ENST00000566409 UBE2G1P62253 170 aa9.86□□□□□ -0.83
FANCA-220ENST00000566409 LGALSLQ3ZCW2 172 aaPredicted RBP9.86□□□□□ -0.83
FANCA-220ENST00000566409 FAM162BQ5T6X4 162 aa9.86□□□□□ -0.83
FANCA-220ENST00000566409 TCEAL7Q9BRU2 100 aa9.86□□□□□ -0.83
FANCA-220ENST00000566409 KANTRA0A1W2PQU2 76 aa9.85□□□□□ -0.83
FANCA-220ENST00000566409 LINC01559Q495D7 138 aa9.85□□□□□ -0.83
FANCA-220ENST00000566409 LINC01556Q5JQF7 62 aa9.85□□□□□ -0.83
FANCA-220ENST00000566409 TMUB2Q71RG4 321 aa9.85□□□□□ -0.83
FANCA-220ENST00000566409 C14orf178Q8N769 122 aaPredicted RBP9.85□□□□□ -0.83
FANCA-220ENST00000566409 ATP6V0E2Q8NHE4 81 aa9.85□□□□□ -0.83
FANCA-220ENST00000566409 GTSF1LQ9H1H1 148 aa9.85□□□□□ -0.83
FANCA-220ENST00000566409 SCRT2Q9NQ03 307 aa9.85□□□□□ -0.83
FANCA-220ENST00000566409 TMSB15BA0A087X1C1 80 aa9.84□□□□□ -0.83
FANCA-220ENST00000566409 SCO2A0A1W2PP80 73 aa9.84□□□□□ -0.83
FANCA-220ENST00000566409 AKR1C3P42330 323 aa9.84□□□□□ -0.83
FANCA-220ENST00000566409 ERVFC1-1P60608 527 aa9.84□□□□□ -0.83
FANCA-220ENST00000566409 OR10J3Q5JRS4 329 aa9.84□□□□□ -0.83
FANCA-220ENST00000566409 LELP1Q5T871 98 aa9.84□□□□□ -0.83
FANCA-220ENST00000566409 C10orf126Q8N4M7 172 aa9.84□□□□□ -0.83
FANCA-220ENST00000566409 MAPKAPK5-AS1Q8N8E1 139 aa9.84□□□□□ -0.83
FANCA-220ENST00000566409 TRAV8-6A0A0B4J262 113 aa9.83□□□□□ -0.84
FANCA-220ENST00000566409 GAGE12JA6NER3 117 aa9.83□□□□□ -0.84
FANCA-220ENST00000566409 IBA57-AS1B1ANH7 110 aa9.83□□□□□ -0.84
FANCA-220ENST00000566409 H2AFB1P0C5Y9 115 aa9.83□□□□□ -0.84
FANCA-220ENST00000566409 CCL20P78556 96 aa9.83□□□□□ -0.84
FANCA-220ENST00000566409 GAGE1Q13065 139 aa9.83□□□□□ -0.84
FANCA-220ENST00000566409 GAGE4Q13068 117 aa9.83□□□□□ -0.84
FANCA-220ENST00000566409 GAGE5Q13069 117 aa9.83□□□□□ -0.84
FANCA-220ENST00000566409 GAGE13Q4V321 117 aa9.83□□□□□ -0.84
FANCA-220ENST00000566409 Q8N3U1 123 aa9.83□□□□□ -0.84
FANCA-220ENST00000566409 MLST8Q9BVC4 326 aa9.83□□□□□ -0.84
FANCA-220ENST00000566409 PGPEP1Q9NXJ5 209 aa9.83□□□□□ -0.84
FANCA-220ENST00000566409 IGHV3-30P01768 117 aa9.82□□□□□ -0.84
FANCA-220ENST00000566409 IGHV3-33P01772 117 aa9.82□□□□□ -0.84
FANCA-220ENST00000566409 IGHV3-30-3P0DP02 117 aa9.82□□□□□ -0.84
FANCA-220ENST00000566409 IGHV3-30-5P0DP03 117 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms