RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 AMTP48728 403 aa12.44□□□□□ -0.42
RAB40C-210ENST00000566290 CMC4P56277 68 aaPredicted RBP12.44□□□□□ -0.42
RAB40C-210ENST00000566290 IQCJQ1A5X6 159 aa12.44□□□□□ -0.42
RAB40C-210ENST00000566290 NDUFA11Q86Y39 141 aa12.44□□□□□ -0.42
RAB40C-210ENST00000566290 WFDC3Q8IUB2 231 aa12.44□□□□□ -0.42
RAB40C-210ENST00000566290 MRPL51Q4U2R6 128 aaKnown RBP12.43□□□□□ -0.42
RAB40C-210ENST00000566290 SMIM15Q7Z3B0 74 aa12.43□□□□□ -0.42
RAB40C-210ENST00000566290 URB1-AS1Q96HZ7 61 aa12.43□□□□□ -0.42
RAB40C-210ENST00000566290 C20orf144Q9BQM9 153 aa12.43□□□□□ -0.42
RAB40C-210ENST00000566290 PRSS47A8MTI9 375 aa12.42□□□□□ -0.42
RAB40C-210ENST00000566290 ANXA2RQ3ZCQ2 193 aa12.42□□□□□ -0.42
RAB40C-210ENST00000566290 KPRPQ5T749 579 aaPredicted RBP12.42□□□□□ -0.42
RAB40C-210ENST00000566290 Q6ZWC4 215 aa12.42□□□□□ -0.42
RAB40C-210ENST00000566290 MRAPQ8TCY5 172 aa12.42□□□□□ -0.42
RAB40C-210ENST00000566290 RNF185Q96GF1 192 aa12.42□□□□□ -0.42
RAB40C-210ENST00000566290 LINC00467Q9BRT7 94 aa12.42□□□□□ -0.42
RAB40C-210ENST00000566290 KRTAP17-1Q9BYP8 105 aa12.42□□□□□ -0.42
RAB40C-210ENST00000566290 LINC01546A6NGU7 62 aa12.41□□□□□ -0.42
RAB40C-210ENST00000566290 LINC00614P0C842 121 aa12.41□□□□□ -0.42
RAB40C-210ENST00000566290 RNASE4P34096 147 aaKnown RBP12.41□□□□□ -0.42
RAB40C-210ENST00000566290 TFPI2P48307 235 aa12.41□□□□□ -0.42
RAB40C-210ENST00000566290 DEFB1P60022 68 aa12.41□□□□□ -0.42
RAB40C-210ENST00000566290 FAM159AQ6UWV7 190 aa12.41□□□□□ -0.42
RAB40C-210ENST00000566290 NIT1Q86X76 327 aa12.41□□□□□ -0.42
RAB40C-210ENST00000566290 AMN1Q8IY45 258 aa12.41□□□□□ -0.42
RAB40C-210ENST00000566290 OR10AG1Q8NH19 301 aa12.41□□□□□ -0.42
RAB40C-210ENST00000566290 PRELID3AQ96N28 172 aa12.41□□□□□ -0.42
RAB40C-210ENST00000566290 MAP6D1Q9H9H5 199 aa12.41□□□□□ -0.42
RAB40C-210ENST00000566290 ZNF256Q9Y2P7 627 aaPredicted RBP12.41□□□□□ -0.42
RAB40C-210ENST00000566290 H3BMM0 161 aa12.4□□□□□ -0.42
RAB40C-210ENST00000566290 POM121L12Q8N7R1 296 aa12.4□□□□□ -0.42
RAB40C-210ENST00000566290 MRAP2Q96G30 205 aa12.4□□□□□ -0.42
RAB40C-210ENST00000566290 GSN-AS1Q9NRJ2 163 aa12.4□□□□□ -0.42
RAB40C-210ENST00000566290 NOTCH3Q9UM47 2321 aa12.39□□□□□ -0.43
RAB40C-210ENST00000566290 D6R8Y8 96 aa12.39□□□□□ -0.43
RAB40C-210ENST00000566290 H3BVH4 76 aa12.39□□□□□ -0.43
RAB40C-210ENST00000566290 RNASE3P12724 160 aaKnown RBP12.39□□□□□ -0.43
RAB40C-210ENST00000566290 CD300EQ496F6 205 aaPredicted RBP12.39□□□□□ -0.43
RAB40C-210ENST00000566290 SAMD5Q5TGI4 173 aa12.39□□□□□ -0.43
RAB40C-210ENST00000566290 SPANXN1Q5VSR9 72 aa12.39□□□□□ -0.43
RAB40C-210ENST00000566290 DNAH9Q9NYC9 4486 aa12.38□□□□□ -0.43
RAB40C-210ENST00000566290 DNAH3Q8TD57 4116 aa12.38□□□□□ -0.43
RAB40C-210ENST00000566290 M0R381 172 aa12.38□□□□□ -0.43
RAB40C-210ENST00000566290 S100A4P26447 101 aaKnown RBP12.38□□□□□ -0.43
RAB40C-210ENST00000566290 CKS2P33552 79 aa12.38□□□□□ -0.43
RAB40C-210ENST00000566290 DEFB131AP59861 70 aa12.38□□□□□ -0.43
RAB40C-210ENST00000566290 PIK3CD-AS1Q5SR53 167 aa12.38□□□□□ -0.43
RAB40C-210ENST00000566290 RNASEKQ6P5S7 137 aaKnown RBP12.38□□□□□ -0.43
RAB40C-210ENST00000566290 C9orf85Q96MD7 179 aa12.38□□□□□ -0.43
RAB40C-210ENST00000566290 DUX3Q96PT4 197 aa12.38□□□□□ -0.43
RAB40C-210ENST00000566290 AP5S1Q9NUS5 200 aa12.38□□□□□ -0.43
RAB40C-210ENST00000566290 MSRB1Q9NZV6 116 aa12.38□□□□□ -0.43
RAB40C-210ENST00000566290 COL7A1Q02388 2944 aa12.38□□□□□ -0.43
RAB40C-210ENST00000566290 IGHV1OR15-1A0A075B7D0 117 aa12.37□□□□□ -0.43
RAB40C-210ENST00000566290 IGLV1-51P01701 117 aa12.37□□□□□ -0.43
RAB40C-210ENST00000566290 Q6ZQT7 251 aa12.37□□□□□ -0.43
RAB40C-210ENST00000566290 PTH2Q96A98 100 aa12.37□□□□□ -0.43
RAB40C-210ENST00000566290 AP1S3Q96PC3 154 aa12.37□□□□□ -0.43
RAB40C-210ENST00000566290 NXT2Q9NPJ8 142 aaKnown RBP12.37□□□□□ -0.43
RAB40C-210ENST00000566290 NAGKQ9UJ70 344 aa12.37□□□□□ -0.43
RAB40C-210ENST00000566290 TRGV11A0A075B6L2 103 aa12.36□□□□□ -0.43
RAB40C-210ENST00000566290 M0R2Z0 102 aa12.36□□□□□ -0.43
RAB40C-210ENST00000566290 CRXO43186 299 aaPredicted RBP12.36□□□□□ -0.43
RAB40C-210ENST00000566290 KIR3DS1Q14943 382 aa12.36□□□□□ -0.43
RAB40C-210ENST00000566290 TEX43Q6ZNM6 134 aa12.36□□□□□ -0.43
RAB40C-210ENST00000566290 DPH3P1Q9H4G8 78 aa12.36□□□□□ -0.43
RAB40C-210ENST00000566290 PHLDA3Q9Y5J5 127 aa12.36□□□□□ -0.43
RAB40C-210ENST00000566290 RYR2Q92736 4967 aa12.35□□□□□ -0.43
RAB40C-210ENST00000566290 IGHV1-24A0A0C4DH33 117 aa12.35□□□□□ -0.43
RAB40C-210ENST00000566290 PPP1R17O96001 155 aa12.35□□□□□ -0.43
RAB40C-210ENST00000566290 CD33P20138 364 aa12.35□□□□□ -0.43
RAB40C-210ENST00000566290 ODF3L2Q3SX64 289 aa12.35□□□□□ -0.43
RAB40C-210ENST00000566290 OXLD1Q5BKU9 147 aa12.35□□□□□ -0.43
RAB40C-210ENST00000566290 FA2HQ7L5A8 372 aa12.35□□□□□ -0.43
RAB40C-210ENST00000566290 MAP1LC3AQ9H492 121 aa12.35□□□□□ -0.43
RAB40C-210ENST00000566290 TRAV12-3A0A0B4J271 114 aa12.34□□□□□ -0.43
RAB40C-210ENST00000566290 IGHV3-16A0A0C4DH30 117 aa12.34□□□□□ -0.43
RAB40C-210ENST00000566290 K7EMI3 77 aa12.34□□□□□ -0.43
RAB40C-210ENST00000566290 MUC21Q5SSG8 566 aa12.34□□□□□ -0.43
RAB40C-210ENST00000566290 PRSS3P2Q8NHM4 247 aa12.34□□□□□ -0.43
RAB40C-210ENST00000566290 NDUFAF3Q9BU61 184 aa12.34□□□□□ -0.43
RAB40C-210ENST00000566290 J3KRW8 73 aa12.33□□□□□ -0.44
RAB40C-210ENST00000566290 NPYP01303 97 aa12.33□□□□□ -0.44
RAB40C-210ENST00000566290 C3orf79P0CE67 100 aa12.33□□□□□ -0.44
RAB40C-210ENST00000566290 EVI2AP22794 236 aa12.33□□□□□ -0.44
RAB40C-210ENST00000566290 PKIAP61925 76 aa12.33□□□□□ -0.44
RAB40C-210ENST00000566290 RPL32P62910 135 aaKnown RBP12.33□□□□□ -0.44
RAB40C-210ENST00000566290 SPINK13Q1W4C9 94 aa12.33□□□□□ -0.44
RAB40C-210ENST00000566290 WFDC9Q8NEX5 89 aa12.33□□□□□ -0.44
RAB40C-210ENST00000566290 HSPB8Q9UJY1 196 aa12.33□□□□□ -0.44
RAB40C-210ENST00000566290 SELENOKQ9Y6D0 94 aa12.33□□□□□ -0.44
RAB40C-210ENST00000566290 MUC21A0A0G2JKD1 596 aa12.32□□□□□ -0.44
RAB40C-210ENST00000566290 MUC21A0A140T8X8 626 aa12.32□□□□□ -0.44
RAB40C-210ENST00000566290 TNFRSF6BO95407 300 aa12.32□□□□□ -0.44
RAB40C-210ENST00000566290 IGLL1P15814 213 aa12.32□□□□□ -0.44
RAB40C-210ENST00000566290 CDPF1Q6NVV7 123 aa12.32□□□□□ -0.44
RAB40C-210ENST00000566290 SPATA12Q7Z6I5 190 aa12.32□□□□□ -0.44
RAB40C-210ENST00000566290 FAM19A2Q8N3H0 131 aa12.32□□□□□ -0.44
RAB40C-210ENST00000566290 NRACQ8N912 160 aa12.32□□□□□ -0.44
RAB40C-210ENST00000566290 Q8N976 141 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms