RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 C9orf170A2RU37 121 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 HMSDA8MTL9 139 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 IQCF6A8MYZ5 107 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 LYZL6O75951 148 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 SFT2D2O95562 160 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 CTSDP07339 412 aaPredicted RBP2.2□□□□□ -2.06
CNOT1-209ENST00000566240 TPT1P13693 172 aaKnown RBP2.2□□□□□ -2.06
CNOT1-209ENST00000566240 PIGPP57054 158 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 FXYD4P59646 89 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 TMEM42Q69YG0 159 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 C6orf201Q7Z4U5 140 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 STX12Q86Y82 276 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 KRTAP13-1Q8IUC0 172 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 C9orf62Q8N4C0 152 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 Q8NDZ9 215 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 OR4S1Q8NGB4 309 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 OR10X1Q8NGY0 326 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 OR10J5Q8NHC4 309 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 H1FXQ92522 213 aaKnown RBP2.2□□□□□ -2.06
CNOT1-209ENST00000566240 NMES1Q9C002 83 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 UQCC1Q9NVA1 299 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 CACFD1Q9UGQ2 172 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 TRAPPC2LQ9UL33 140 aa2.2□□□□□ -2.06
CNOT1-209ENST00000566240 KNL1Q8NG31 2342 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 IGKV1-9A0A0C4DH69 117 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 CRYM-AS1A6NIL9 109 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 GPR31O00270 319 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 SDCBPO00560 298 aaPredicted RBP2.19□□□□□ -2.06
CNOT1-209ENST00000566240 GEMIN2O14893 280 aaKnown RBP2.19□□□□□ -2.06
CNOT1-209ENST00000566240 PGLYRP1O75594 196 aaPredicted RBP2.19□□□□□ -2.06
CNOT1-209ENST00000566240 S1PR2O95136 353 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 PPYP01298 95 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 IFNA10P01566 189 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 QRFPP83859 136 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 SLC38A11Q08AI6 406 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 MSMO1Q15800 293 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 PIGYQ3MUY2 71 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 OR2T2Q6IF00 324 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 TEX261Q6UWH6 196 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 Q6ZS92 163 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 PDZD9Q8IXQ8 264 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 SLC25A40Q8TBP6 338 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 PPP1R1CQ8WVI7 109 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 ARL11Q969Q4 196 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 C2orf50Q96LR7 162 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 OR2J1Q9GZK6 312 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 NAA60Q9H7X0 242 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 DYNLRB1Q9NP97 96 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 RASL12Q9NYN1 266 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 GSKIPQ9P0R6 139 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 U3KQ87 197 aa2.19□□□□□ -2.06
CNOT1-209ENST00000566240 CHD3Q12873 2000 aaKnown RBP2.18□□□□□ -2.06
CNOT1-209ENST00000566240 HIVEP2P31629 2446 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 NCOA6Q14686 2063 aaPredicted RBP2.18□□□□□ -2.06
CNOT1-209ENST00000566240 TRGV10A0A0A0MS01 117 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 TRBV10-2A0A0K0K1G8 114 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 C3orf85A0A1B0GTC6 90 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 ZNF705FA8MVS1 300 aaPredicted RBP2.18□□□□□ -2.06
CNOT1-209ENST00000566240 MPC2O95563 127 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 PRH1P02810 166 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 SLC25A4P12235 298 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 SUPT4H1P63272 117 aaKnown RBP2.18□□□□□ -2.06
CNOT1-209ENST00000566240 CLLU1Q5K131 121 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 TEX36Q5VZQ5 186 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 SLC36A1Q7Z2H8 476 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 KCNRGQ8N5I3 272 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 TCTEX1D1Q8N7M0 179 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 MAFIPQ8WZ33 124 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 CIB3Q96Q77 187 aaPredicted RBP2.18□□□□□ -2.06
CNOT1-209ENST00000566240 PBDC1Q9BVG4 233 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 ENY2Q9NPA8 101 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 JPT1Q9UK76 154 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 MED12LQ86YW9 2145 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 TANC2Q9HCD6 1990 aa2.18□□□□□ -2.06
CNOT1-209ENST00000566240 ESPL1Q14674 2120 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 REV3LO60673 3130 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 SSSCA1O60232 199 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 SIX6O95475 246 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 OR2H2O95918 312 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 IFNA1P01562 189 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 APOA2P02652 100 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 G6PCP35575 357 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 GLRXP35754 106 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 RAB5CP51148 216 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 EDDM3BP56851 147 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 HMGN3Q15651 99 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 AKR1C8PQ5T2L2 129 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 ALKAL2Q6UX46 152 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 SPACA4Q8TDM5 124 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 AQP10Q96PS8 301 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 SCGB3A1Q96QR1 104 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 TAF9BQ9HBM6 251 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 TNFSF18Q9UNG2 199 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 MALRD1Q5VYJ5 2156 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 ZDBF2Q9HCK1 2354 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 CDH23Q9H251 3354 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 PCNX2A6NKB5 2137 aa2.17□□□□□ -2.06
CNOT1-209ENST00000566240 TNRC18O15417 2968 aaPredicted RBP2.16□□□□□ -2.06
CNOT1-209ENST00000566240 DNAJC13O75165 2243 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 TRBV6-7A0A0A0MS04 114 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms