RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 FXYD6-FXYD2A0A087WZ82 144 aa15.9■□□□□ 0.14
RAB40C-209ENST00000565511 TRBV6-4A0A1B0GX49 114 aa15.9■□□□□ 0.14
RAB40C-209ENST00000565511 K7EQM0 130 aa15.9■□□□□ 0.14
RAB40C-209ENST00000565511 HAMPP81172 84 aa15.9■□□□□ 0.14
RAB40C-209ENST00000565511 RHOHQ15669 191 aa15.9■□□□□ 0.14
RAB40C-209ENST00000565511 PTH2Q96A98 100 aa15.9■□□□□ 0.14
RAB40C-209ENST00000565511 BATF3Q9NR55 127 aa15.9■□□□□ 0.14
RAB40C-209ENST00000565511 Q9UF83 564 aa15.9■□□□□ 0.14
RAB40C-209ENST00000565511 ARL2-SNX15V9GYD0 113 aa15.9■□□□□ 0.14
RAB40C-209ENST00000565511 HERC1Q15751 4861 aa15.89■□□□□ 0.13
RAB40C-209ENST00000565511 EPM2AB3EWF7 344 aa15.89■□□□□ 0.13
RAB40C-209ENST00000565511 IGHV3-30P01768 117 aa15.89■□□□□ 0.13
RAB40C-209ENST00000565511 IGHV3-33P01772 117 aa15.89■□□□□ 0.13
RAB40C-209ENST00000565511 IGHV3-30-3P0DP02 117 aa15.89■□□□□ 0.13
RAB40C-209ENST00000565511 IGHV3-30-5P0DP03 117 aa15.89■□□□□ 0.13
RAB40C-209ENST00000565511 UBE2G2P60604 165 aa15.89■□□□□ 0.13
RAB40C-209ENST00000565511 JPT2Q9H910 190 aa15.89■□□□□ 0.13
RAB40C-209ENST00000565511 A0A1W2PRE2 83 aa15.88■□□□□ 0.13
RAB40C-209ENST00000565511 IBA57-AS1B1ANH7 110 aa15.88■□□□□ 0.13
RAB40C-209ENST00000565511 FGF8P55075 233 aaPredicted RBP15.88■□□□□ 0.13
RAB40C-209ENST00000565511 ZFP69Q49AA0 526 aa15.88■□□□□ 0.13
RAB40C-209ENST00000565511 OR10J3Q5JRS4 329 aa15.88■□□□□ 0.13
RAB40C-209ENST00000565511 Q86TA4 180 aa15.88■□□□□ 0.13
RAB40C-209ENST00000565511 PRADC1Q9BSG0 188 aa15.88■□□□□ 0.13
RAB40C-209ENST00000565511 PARLQ9H300 379 aa15.88■□□□□ 0.13
RAB40C-209ENST00000565511 Q9HAA7 133 aa15.88■□□□□ 0.13
RAB40C-209ENST00000565511 LINC00694P0DN24 101 aa15.87■□□□□ 0.13
RAB40C-209ENST00000565511 CTXND1A0A1B0GTU2 59 aa15.86■□□□□ 0.13
RAB40C-209ENST00000565511 PEX7O00628 323 aa15.86■□□□□ 0.13
RAB40C-209ENST00000565511 LELP1Q5T871 98 aa15.86■□□□□ 0.13
RAB40C-209ENST00000565511 INO80EQ8NBZ0 244 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-209ENST00000565511 SAMD10Q9BYL1 202 aa15.86■□□□□ 0.13
RAB40C-209ENST00000565511 TRAV8-6A0A0B4J262 113 aa15.85■□□□□ 0.13
RAB40C-209ENST00000565511 FAM74A7A6NL05 159 aa15.85■□□□□ 0.13
RAB40C-209ENST00000565511 GCSHP23434 173 aa15.85■□□□□ 0.13
RAB40C-209ENST00000565511 CRIP1P50238 77 aa15.85■□□□□ 0.13
RAB40C-209ENST00000565511 SAPCD1Q5SSQ6 148 aa15.85■□□□□ 0.13
RAB40C-209ENST00000565511 UFSP1Q6NVU6 142 aa15.85■□□□□ 0.13
RAB40C-209ENST00000565511 ATP6V0E2Q8NHE4 81 aa15.85■□□□□ 0.13
RAB40C-209ENST00000565511 CIDEAO60543 219 aa15.84■□□□□ 0.13
RAB40C-209ENST00000565511 IFNA7P01567 189 aa15.84■□□□□ 0.13
RAB40C-209ENST00000565511 MGST1P10620 155 aaKnown RBP15.84■□□□□ 0.13
RAB40C-209ENST00000565511 WFDC2Q14508 124 aa15.84■□□□□ 0.13
RAB40C-209ENST00000565511 Q5VSD8 79 aa15.84■□□□□ 0.13
RAB40C-209ENST00000565511 OR2T35Q8NGX2 323 aa15.84■□□□□ 0.13
RAB40C-209ENST00000565511 ZC2HC1AQ96GY0 325 aa15.84■□□□□ 0.13
RAB40C-209ENST00000565511 GTSF1LQ9H1H1 148 aa15.84■□□□□ 0.13
RAB40C-209ENST00000565511 BORCS7-ASMTA0A0B4J1R7 106 aa15.83■□□□□ 0.12
RAB40C-209ENST00000565511 GAGE12JA6NER3 117 aa15.83■□□□□ 0.12
RAB40C-209ENST00000565511 GAGE1Q13065 139 aa15.83■□□□□ 0.12
RAB40C-209ENST00000565511 GAGE4Q13068 117 aa15.83■□□□□ 0.12
RAB40C-209ENST00000565511 GAGE5Q13069 117 aa15.83■□□□□ 0.12
RAB40C-209ENST00000565511 GAGE13Q4V321 117 aa15.83■□□□□ 0.12
RAB40C-209ENST00000565511 C14orf178Q8N769 122 aaPredicted RBP15.83■□□□□ 0.12
RAB40C-209ENST00000565511 CYTL1Q9NRR1 136 aa15.83■□□□□ 0.12
RAB40C-209ENST00000565511 MYCBP2O75592 4640 aa15.82■□□□□ 0.12
RAB40C-209ENST00000565511 H3BVH4 76 aa15.82■□□□□ 0.12
RAB40C-209ENST00000565511 PSCAO43653 123 aa15.82■□□□□ 0.12
RAB40C-209ENST00000565511 SMR3BP02814 79 aaPredicted RBP15.82■□□□□ 0.12
RAB40C-209ENST00000565511 FLG2Q5D862 2391 aaPredicted RBP15.82■□□□□ 0.12
RAB40C-209ENST00000565511 IGLV5-52A0A0A0MRZ9 124 aa15.81■□□□□ 0.12
RAB40C-209ENST00000565511 ASIPP42127 132 aa15.81■□□□□ 0.12
RAB40C-209ENST00000565511 LGALSLQ3ZCW2 172 aaPredicted RBP15.81■□□□□ 0.12
RAB40C-209ENST00000565511 FABP5P3A8MUU1 101 aa15.8■□□□□ 0.12
RAB40C-209ENST00000565511 M0R036 132 aa15.8■□□□□ 0.12
RAB40C-209ENST00000565511 S100A4P26447 101 aaKnown RBP15.8■□□□□ 0.12
RAB40C-209ENST00000565511 DMRTA1Q5VZB9 504 aa15.8■□□□□ 0.12
RAB40C-209ENST00000565511 ZFP2Q6ZN57 461 aa15.8■□□□□ 0.12
RAB40C-209ENST00000565511 Q8N814 137 aa15.8■□□□□ 0.12
RAB40C-209ENST00000565511 GRIFINA4D1Z8 144 aa15.79■□□□□ 0.12
RAB40C-209ENST00000565511 A8MWV9 139 aa15.79■□□□□ 0.12
RAB40C-209ENST00000565511 B4DEV8 164 aa15.79■□□□□ 0.12
RAB40C-209ENST00000565511 KRBOX1C9JBD0 128 aa15.79■□□□□ 0.12
RAB40C-209ENST00000565511 SH2D1AO60880 128 aa15.79■□□□□ 0.12
RAB40C-209ENST00000565511 INAFM2P0DMQ5 153 aa15.79■□□□□ 0.12
RAB40C-209ENST00000565511 IL36BQ9NZH7 164 aa15.79■□□□□ 0.12
RAB40C-209ENST00000565511 DMBT1Q9UGM3 2413 aaPredicted RBP15.78■□□□□ 0.12
RAB40C-209ENST00000565511 MAP1LC3B2A6NCE7 125 aa15.78■□□□□ 0.12
RAB40C-209ENST00000565511 SMLR1H3BR10 107 aa15.78■□□□□ 0.12
RAB40C-209ENST00000565511 AKR1C8PQ5T2L2 129 aa15.78■□□□□ 0.12
RAB40C-209ENST00000565511 MAP1LC3BQ9GZQ8 125 aa15.78■□□□□ 0.12
RAB40C-209ENST00000565511 FHITP49789 147 aa15.77■□□□□ 0.12
RAB40C-209ENST00000565511 PIK3CD-AS1Q5SR53 167 aa15.77■□□□□ 0.12
RAB40C-209ENST00000565511 COX8CQ7Z4L0 72 aa15.77■□□□□ 0.12
RAB40C-209ENST00000565511 FAM30AQ9NZY2 134 aa15.77■□□□□ 0.12
RAB40C-209ENST00000565511 SRRM2Q9UQ35 2752 aaKnown RBP15.76■□□□□ 0.11
RAB40C-209ENST00000565511 ARPC5O15511 151 aa15.76■□□□□ 0.11
RAB40C-209ENST00000565511 ARMS2P0C7Q2 107 aa15.76■□□□□ 0.11
RAB40C-209ENST00000565511 DNLZQ5SXM8 178 aa15.76■□□□□ 0.11
RAB40C-209ENST00000565511 DAZ4Q86SG3 579 aaKnown RBP15.76■□□□□ 0.11
RAB40C-209ENST00000565511 NTN5Q8WTR8 489 aaPredicted RBP15.76■□□□□ 0.11
RAB40C-209ENST00000565511 HIST1H2BAQ96A08 127 aa15.76■□□□□ 0.11
RAB40C-209ENST00000565511 DAZ3Q9NR90 486 aaKnown RBP15.76■□□□□ 0.11
RAB40C-209ENST00000565511 LAGE3Q14657 143 aa15.75■□□□□ 0.11
RAB40C-209ENST00000565511 FRZBQ92765 325 aa15.75■□□□□ 0.11
RAB40C-209ENST00000565511 DNAJC30Q96LL9 226 aa15.75■□□□□ 0.11
RAB40C-209ENST00000565511 TMSB15BA0A087X1C1 80 aa15.74■□□□□ 0.11
RAB40C-209ENST00000565511 A0A087WWL8 130 aa15.73■□□□□ 0.11
RAB40C-209ENST00000565511 LECT2O14960 151 aa15.73■□□□□ 0.11
RAB40C-209ENST00000565511 ZNF674Q2M3X9 581 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms