RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 CCL20P78556 96 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 FLI1Q01543 452 aaPredicted RBP6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 ERCC8Q13216 396 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 Q6ZSA8 131 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 Q8N814 137 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 FMC1Q96HJ9 113 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 SMDT1Q9H4I9 107 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 GNG13Q9P2W3 67 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 TRAV12-2A0A075B6T6 113 aa6.07□□□□□ -1.44
VPS9D1-205ENST00000565452 C7orf71A4D174 169 aa6.07□□□□□ -1.44
VPS9D1-205ENST00000565452 RAB14P61106 215 aa6.07□□□□□ -1.44
VPS9D1-205ENST00000565452 UBE2G1P62253 170 aa6.07□□□□□ -1.44
VPS9D1-205ENST00000565452 MEF2BQ02080 365 aaPredicted RBP6.07□□□□□ -1.44
VPS9D1-205ENST00000565452 TMEM183BQ1AE95 376 aa6.07□□□□□ -1.44
VPS9D1-205ENST00000565452 LINC00612Q8N6U2 182 aa6.07□□□□□ -1.44
VPS9D1-205ENST00000565452 TMEM263Q8WUH6 116 aaKnown RBP6.07□□□□□ -1.44
VPS9D1-205ENST00000565452 VSIG2Q96IQ7 327 aa6.07□□□□□ -1.44
VPS9D1-205ENST00000565452 PYGO2Q9BRQ0 406 aa6.07□□□□□ -1.44
VPS9D1-205ENST00000565452 LINC00467Q9BRT7 94 aa6.07□□□□□ -1.44
VPS9D1-205ENST00000565452 TREM1Q9NP99 234 aa6.07□□□□□ -1.44
VPS9D1-205ENST00000565452 RPH3ALQ9UNE2 315 aa6.07□□□□□ -1.44
VPS9D1-205ENST00000565452 PSG8Q9UQ74 426 aa6.07□□□□□ -1.44
VPS9D1-205ENST00000565452 KRTAP9-6A0A140TA67 174 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 A0A1B0GV50 99 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 RBFOX3A6NFN3 312 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 TMEM250H0YL14 139 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 ZNF324O75467 553 aaPredicted RBP6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 IGLV2-11P01706 119 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 BCL2P10415 239 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 KRTAP10-4P60372 401 aaPredicted RBP6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 GNG5P63218 68 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 SMUG1Q53HV7 270 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 Q6AWC8 147 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 LYPD5Q6UWN5 251 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 COX8CQ7Z4L0 72 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 ZFAND2AQ8N6M9 145 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 RNASE8Q8TDE3 154 aaKnown RBP6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 C11orf52Q96A22 123 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 SMIM12Q96EX1 92 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 ICOSQ9Y6W8 199 aa6.06□□□□□ -1.44
VPS9D1-205ENST00000565452 TRAV12-3A0A0B4J271 114 aa6.05□□□□□ -1.44
VPS9D1-205ENST00000565452 TRAV21A0A0B4J279 112 aa6.05□□□□□ -1.44
VPS9D1-205ENST00000565452 FABP5P3A8MUU1 101 aa6.05□□□□□ -1.44
VPS9D1-205ENST00000565452 SNURFLB1AK76 121 aa6.05□□□□□ -1.44
VPS9D1-205ENST00000565452 RNASE4P34096 147 aaKnown RBP6.05□□□□□ -1.44
VPS9D1-205ENST00000565452 AKR1C3P42330 323 aa6.05□□□□□ -1.44
VPS9D1-205ENST00000565452 ZNF506Q5JVG8 444 aa6.05□□□□□ -1.44
VPS9D1-205ENST00000565452 GFI1BQ5VTD9 330 aa6.05□□□□□ -1.44
VPS9D1-205ENST00000565452 PRNTQ86SH4 94 aa6.05□□□□□ -1.44
VPS9D1-205ENST00000565452 C10orf126Q8N4M7 172 aa6.05□□□□□ -1.44
VPS9D1-205ENST00000565452 KCNS1Q96KK3 526 aa6.05□□□□□ -1.44
VPS9D1-205ENST00000565452 FAM210AQ96ND0 272 aa6.05□□□□□ -1.44
VPS9D1-205ENST00000565452 EIF5A2Q9GZV4 153 aaKnown RBP6.05□□□□□ -1.44
VPS9D1-205ENST00000565452 TRGV2A0A075B6R0 118 aa6.04□□□□□ -1.44
VPS9D1-205ENST00000565452 TRAV8-1A0A0A6YYK1 113 aa6.04□□□□□ -1.44
VPS9D1-205ENST00000565452 PAX4O43316 350 aa6.04□□□□□ -1.44
VPS9D1-205ENST00000565452 LTAP01374 205 aa6.04□□□□□ -1.44
VPS9D1-205ENST00000565452 CRYGDP07320 174 aa6.04□□□□□ -1.44
VPS9D1-205ENST00000565452 MRPL23Q16540 153 aaKnown RBP6.04□□□□□ -1.44
VPS9D1-205ENST00000565452 TDRG1Q3Y452 100 aa6.04□□□□□ -1.44
VPS9D1-205ENST00000565452 ANXA2RQ3ZCQ2 193 aa6.04□□□□□ -1.44
VPS9D1-205ENST00000565452 TMEM183AQ8IXX5 376 aa6.04□□□□□ -1.44
VPS9D1-205ENST00000565452 EIF4E3Q8N5X7 224 aaKnown RBP6.04□□□□□ -1.44
VPS9D1-205ENST00000565452 BIN3Q9NQY0 253 aa6.04□□□□□ -1.44
VPS9D1-205ENST00000565452 MED9Q9NWA0 146 aa6.04□□□□□ -1.44
VPS9D1-205ENST00000565452 IGHV1OR15-1A0A075B7D0 117 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 TRAV34A0A0B4J273 112 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 SCO2A0A1W2PP80 73 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 RGS13O14921 159 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 PFN1P07737 140 aaKnown RBP6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 RPL35P42766 123 aaKnown RBP6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 SLAQ13239 276 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 PEA15Q15121 130 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 CLLU1Q5K131 121 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 IBA57Q5T440 356 aaKnown RBP6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 FAM159AQ6UWV7 190 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 SCXQ7RTU7 201 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 NEGR1Q7Z3B1 354 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 BAGE2Q86Y30 109 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 Q8TAT8 98 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 TVP23CQ96ET8 276 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 LINC00479Q96M42 142 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 CHAC1Q9BUX1 264 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 MLST8Q9BVC4 326 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 TP53TG3Q9ULZ0 132 aa6.03□□□□□ -1.44
VPS9D1-205ENST00000565452 RAB19A4D1S5 217 aa6.02□□□□□ -1.45
VPS9D1-205ENST00000565452 J3KRW8 73 aa6.02□□□□□ -1.45
VPS9D1-205ENST00000565452 GCGP01275 180 aa6.02□□□□□ -1.45
VPS9D1-205ENST00000565452 MT1HL1P0DM35 61 aa6.02□□□□□ -1.45
VPS9D1-205ENST00000565452 DAZ2Q13117 558 aaKnown RBP6.02□□□□□ -1.45
VPS9D1-205ENST00000565452 BTN1A1Q13410 526 aa6.02□□□□□ -1.45
VPS9D1-205ENST00000565452 ZNF674Q2M3X9 581 aa6.02□□□□□ -1.45
VPS9D1-205ENST00000565452 FAM74A3Q4VXF1 159 aa6.02□□□□□ -1.45
VPS9D1-205ENST00000565452 Q86TA4 180 aa6.02□□□□□ -1.45
VPS9D1-205ENST00000565452 SGK494Q96LW2 274 aa6.02□□□□□ -1.45
VPS9D1-205ENST00000565452 TNXBP22105 4242 aa6.01□□□□□ -1.45
VPS9D1-205ENST00000565452 TRGV11A0A075B6L2 103 aa6.01□□□□□ -1.45
VPS9D1-205ENST00000565452 C9JCJ5 164 aa6.01□□□□□ -1.45
VPS9D1-205ENST00000565452 GAS8-AS1O95177 125 aa6.01□□□□□ -1.45
VPS9D1-205ENST00000565452 GNG4P50150 75 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms