RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 GAGE4Q13068 117 aa4.33□□□□□ -1.72
TCF4-228ENST00000565393 GAGE5Q13069 117 aa4.33□□□□□ -1.72
TCF4-228ENST00000565393 RHOHQ15669 191 aa4.33□□□□□ -1.72
TCF4-228ENST00000565393 GAGE13Q4V321 117 aa4.33□□□□□ -1.72
TCF4-228ENST00000565393 ZNF506Q5JVG8 444 aa4.33□□□□□ -1.72
TCF4-228ENST00000565393 CDPF1Q6NVV7 123 aa4.33□□□□□ -1.72
TCF4-228ENST00000565393 C9orf85Q96MD7 179 aa4.33□□□□□ -1.72
TCF4-228ENST00000565393 BOLA1Q9Y3E2 137 aa4.33□□□□□ -1.72
TCF4-228ENST00000565393 PLECQ15149 4684 aaKnown RBP4.33□□□□□ -1.72
TCF4-228ENST00000565393 HERC2O95714 4834 aa4.33□□□□□ -1.72
TCF4-228ENST00000565393 KMT2AQ03164 3969 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 IGKV3D-20A0A0C4DH25 116 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 CTXND1A0A1B0GTU2 59 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 GRIFINA4D1Z8 144 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 A8MWV9 139 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 IBA57-AS1B1ANH7 110 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 B4DEV8 164 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 M0R036 132 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 SMR3BP02814 79 aaPredicted RBP4.32□□□□□ -1.72
TCF4-228ENST00000565393 ARMS2P0C7Q2 107 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 TIRAPP58753 221 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 KRTAP10-1P60331 282 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 UBE2G1P62253 170 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 ZNF726P1Q15940 193 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 LELP1Q5T871 98 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 DMRTA1Q5VZB9 504 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 CST9LP1Q5W188 147 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 Q6ZSN1 163 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 SYT8Q8NBV8 401 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 STOML3Q8TAV4 291 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 HIST1H2BAQ96A08 127 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 PTH2Q96A98 100 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 NKX6-2Q9C056 277 aaPredicted RBP4.32□□□□□ -1.72
TCF4-228ENST00000565393 GTSF1LQ9H1H1 148 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 JPT2Q9H910 190 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 ZFP30Q9Y2G7 519 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 ARL2-SNX15V9GYD0 113 aa4.32□□□□□ -1.72
TCF4-228ENST00000565393 NACAE9PAV3 2078 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 RYR1P21817 5038 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 TMSB15BA0A087X1C1 80 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 IGLV5-52A0A0A0MRZ9 124 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 RNF222A6NCQ9 220 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 FAM74A7A6NL05 159 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 PEX7O00628 323 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 ARPC5O15511 151 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 INAFM2P0DMQ5 153 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 TPT1P13693 172 aaKnown RBP4.31□□□□□ -1.72
TCF4-228ENST00000565393 CRIP1P50238 77 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 XGP55808 180 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 RGS21Q2M5E4 152 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 LINC01556Q5JQF7 62 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 ZFP2Q6ZN57 461 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 FRZBQ92765 325 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 TM2D2Q9BX73 214 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 SAMD10Q9BYL1 202 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 PARLQ9H300 379 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 PHLDA3Q9Y5J5 127 aa4.31□□□□□ -1.72
TCF4-228ENST00000565393 A0A087WWL8 130 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 MAP1LC3B2A6NCE7 125 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 KRBOX1C9JBD0 128 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 FAM229AH3BQW9 127 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 H3BVH4 76 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 M0R381 172 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 SH2D1AO60880 128 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 SSTP61278 116 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 FAM162BQ5T6X4 162 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 FAM74A4Q5TZK3 123 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 OR11H4Q8NGC9 324 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 SFT2D1Q8WV19 159 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 ZC2HC1AQ96GY0 325 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 FMC1Q96HJ9 113 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 MAP1LC3BQ9GZQ8 125 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 CYTL1Q9NRR1 136 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 IL36BQ9NZH7 164 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 Q9UF83 564 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 TMA7Q9Y2S6 64 aaKnown RBP4.3□□□□□ -1.72
TCF4-228ENST00000565393 URGCP-MRPS24S4R325 110 aa4.3□□□□□ -1.72
TCF4-228ENST00000565393 A0A087WWC5 75 aa4.29□□□□□ -1.72
TCF4-228ENST00000565393 TRAV8-3A0A0A6YYJ7 113 aa4.29□□□□□ -1.72
TCF4-228ENST00000565393 A0A1B0GV50 99 aa4.29□□□□□ -1.72
TCF4-228ENST00000565393 LRCOL1A6NCL2 159 aa4.29□□□□□ -1.72
TCF4-228ENST00000565393 SMLR1H3BR10 107 aa4.29□□□□□ -1.72
TCF4-228ENST00000565393 PAGE4O60829 102 aa4.29□□□□□ -1.72
TCF4-228ENST00000565393 NDUFA5Q16718 116 aa4.29□□□□□ -1.72
TCF4-228ENST00000565393 PIK3CD-AS1Q5SR53 167 aa4.29□□□□□ -1.72
TCF4-228ENST00000565393 KCNIP4Q6PIL6 250 aa4.29□□□□□ -1.72
TCF4-228ENST00000565393 DAZ4Q86SG3 579 aaKnown RBP4.29□□□□□ -1.72
TCF4-228ENST00000565393 Q86TA4 180 aa4.29□□□□□ -1.72
TCF4-228ENST00000565393 C14orf178Q8N769 122 aaPredicted RBP4.29□□□□□ -1.72
TCF4-228ENST00000565393 Q8N814 137 aa4.29□□□□□ -1.72
TCF4-228ENST00000565393 FAM213BQ8TBF2 198 aa4.29□□□□□ -1.72
TCF4-228ENST00000565393 NTN5Q8WTR8 489 aaPredicted RBP4.29□□□□□ -1.72
TCF4-228ENST00000565393 DAZ3Q9NR90 486 aaKnown RBP4.29□□□□□ -1.72
TCF4-228ENST00000565393 TMEM262E9PQX1 116 aa4.28□□□□□ -1.72
TCF4-228ENST00000565393 RHODO00212 210 aa4.28□□□□□ -1.72
TCF4-228ENST00000565393 LECT2O14960 151 aa4.28□□□□□ -1.72
TCF4-228ENST00000565393 S100A9P06702 114 aaKnown RBP4.28□□□□□ -1.72
TCF4-228ENST00000565393 AKR1C3P42330 323 aa4.28□□□□□ -1.72
TCF4-228ENST00000565393 FHITP49789 147 aa4.28□□□□□ -1.72
TCF4-228ENST00000565393 HAMPP81172 84 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms