RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 DLX6P56179 175 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 UBE2D3P61077 147 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 UBE2D2P62837 147 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 TMEM30BQ3MIR4 351 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 Q6ZS46 218 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 TRPT1Q86TN4 253 aaKnown RBP12.49□□□□□ -0.41
LINC00554-201ENST00000564841 FABP5P3A8MUU1 101 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 H7C2G1 150 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 SCGB1C2P0DMR2 95 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 UBE2D1P51668 147 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 SCGB3A1Q96QR1 104 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 RAX2Q96IS3 184 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 A8MWV9 139 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 J3KRW8 73 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 CD7P09564 240 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 TIMM23O14925 209 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 RASL10AQ92737 203 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 ABCA12Q86UK0 2595 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 TRAV8-2A0A0B4J237 113 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 NDUFA11Q86Y39 141 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 LINC00311Q8N616 119 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 CITED1Q99966 193 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 CNFNQ9BYD5 112 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 CUBNO60494 3623 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 BUB1B-PAK6H3BSN5 160 aa12.46□□□□□ -0.42
LINC00554-201ENST00000564841 C19orf84I3L1E1 186 aa12.46□□□□□ -0.42
LINC00554-201ENST00000564841 RPL32P62910 135 aaKnown RBP12.46□□□□□ -0.42
LINC00554-201ENST00000564841 CSPG4Q6UVK1 2322 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 C9JAW5 83 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 NDUFV3P56181 108 aaKnown RBP12.45□□□□□ -0.42
LINC00554-201ENST00000564841 OR11H6Q8NGC7 330 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 RPL39LQ96EH5 51 aaKnown RBP12.45□□□□□ -0.42
LINC00554-201ENST00000564841 RAB1BQ9H0U4 201 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 IGHV3-49A0A0A0MS15 119 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 BRI3O95415 125 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 CFC1BP0CG36 223 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 CFC1P0CG37 223 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 PDE6HQ13956 83 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 F8W735 103 aaPredicted RBP12.44□□□□□ -0.42
LINC00554-201ENST00000564841 PRORYQ9H606 182 aa12.44□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE2BQ13066 116 aa12.44□□□□□ -0.42
LINC00554-201ENST00000564841 FBXL19-AS1Q494R0 122 aa12.44□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE2EQ4V326 116 aa12.44□□□□□ -0.42
LINC00554-201ENST00000564841 NEXN-AS1Q8NBZ9 246 aa12.44□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE2DQ9UEU5 116 aa12.44□□□□□ -0.42
LINC00554-201ENST00000564841 DOPEY1Q5JWR5 2465 aa12.43□□□□□ -0.42
LINC00554-201ENST00000564841 SPANXN1Q5VSR9 72 aa12.43□□□□□ -0.42
LINC00554-201ENST00000564841 FAM159AQ6UWV7 190 aa12.43□□□□□ -0.42
LINC00554-201ENST00000564841 BAALCQ8WXS3 180 aa12.43□□□□□ -0.42
LINC00554-201ENST00000564841 PTPN13Q12923 2485 aa12.43□□□□□ -0.42
LINC00554-201ENST00000564841 ELANEP08246 267 aa12.43□□□□□ -0.42
LINC00554-201ENST00000564841 COX8CQ7Z4L0 72 aa12.43□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE12JA6NER3 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 A6NJY4 79 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 RHODO00212 210 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE7O76087 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE12FP0CL80 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE12GP0CL81 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE12IP0CL82 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE4Q13068 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 IGHV7-4-1A0A0J9YVY3 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 SLC25A20O43772 301 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 IGLV1-47P01700 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 COX6B1P14854 86 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 FANCD2OSQ96PS1 177 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 TSPEAR-AS2P59090 65 aa12.41□□□□□ -0.42
LINC00554-201ENST00000564841 PRB1P04280 392 aa12.41□□□□□ -0.42
LINC00554-201ENST00000564841 LINC01559Q495D7 138 aa12.41□□□□□ -0.42
LINC00554-201ENST00000564841 NTN5Q8WTR8 489 aaPredicted RBP12.41□□□□□ -0.42
LINC00554-201ENST00000564841 TIMD4Q96H15 378 aa12.41□□□□□ -0.42
LINC00554-201ENST00000564841 SMIM2Q9BVW6 85 aa12.41□□□□□ -0.42
LINC00554-201ENST00000564841 SNCGO76070 127 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 RPL7P18124 248 aaKnown RBP12.4□□□□□ -0.42
LINC00554-201ENST00000564841 TTC32Q5I0X7 151 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 AGPAT4-IT1Q9H0P7 198 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 KAAG1Q9UBP8 84 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 A0A0J9YY99 117 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 M0R381 172 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 IGF1P05019 195 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 SRD5A1P18405 259 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 C11orf86A6NJI1 115 aa12.4□□□□□ -0.43
LINC00554-201ENST00000564841 LINC01619G3V211 115 aa12.4□□□□□ -0.43
LINC00554-201ENST00000564841 EIF4EBP3O60516 100 aaPredicted RBP12.4□□□□□ -0.43
LINC00554-201ENST00000564841 C2orf66Q6UXQ4 117 aa12.4□□□□□ -0.43
LINC00554-201ENST00000564841 BEX4Q9NWD9 120 aaPredicted RBP12.4□□□□□ -0.43
LINC00554-201ENST00000564841 TEX49A0A1B0GTD5 131 aa12.39□□□□□ -0.43
LINC00554-201ENST00000564841 TLN2Q9Y4G6 2542 aa12.39□□□□□ -0.43
LINC00554-201ENST00000564841 TRAV12-1A0A0B4J245 112 aa12.39□□□□□ -0.43
LINC00554-201ENST00000564841 SCGB2A1O75556 95 aa12.39□□□□□ -0.43
LINC00554-201ENST00000564841 DUSP14O95147 198 aaKnown RBP12.39□□□□□ -0.43
LINC00554-201ENST00000564841 SBSPONQ8IVN8 264 aa12.39□□□□□ -0.43
LINC00554-201ENST00000564841 ITLN2Q8WWU7 325 aaPredicted RBP12.39□□□□□ -0.43
LINC00554-201ENST00000564841 C14orf178Q8N769 122 aaPredicted RBP12.38□□□□□ -0.43
LINC00554-201ENST00000564841 MFAP4P55083 255 aa12.38□□□□□ -0.43
LINC00554-201ENST00000564841 NDPQ00604 133 aa12.38□□□□□ -0.43
LINC00554-201ENST00000564841 CRYGDP07320 174 aa12.37□□□□□ -0.43
LINC00554-201ENST00000564841 C10orf126Q8N4M7 172 aa12.37□□□□□ -0.43
LINC00554-201ENST00000564841 TOMM6Q96B49 74 aa12.37□□□□□ -0.43
LINC00554-201ENST00000564841 FAM110AQ9BQ89 295 aa12.37□□□□□ -0.43
LINC00554-201ENST00000564841 IGHV4-39P01824 125 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms