RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 TMEM14CQ9P0S9 112 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 LRP5O75197 1615 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 TNRC6AQ8NDV7 1962 aaKnown RBP1.12□□□□□ -2.23
UBR1-205ENST00000564540 UNC13CQ8NB66 2214 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 IGKV3-7A0A075B6H7 116 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 TRBV6-7A0A0A0MS04 114 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 IGKV3D-7A0A0C4DH55 119 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 IGKV3OR2-268A0A0C4DH90 116 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 CXorf51AA0A1B0GTR3 108 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 TMEM30CPA0ZSE6 113 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 ATP6V1G2-DDX39BF2Z307 99 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 IGHV3-30P01768 117 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 AKAIN1P0CW23 69 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 IGHV3-30-5P0DP03 117 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 SLC25A6P12236 298 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 PDE6GP18545 87 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 POLR2JP52435 117 aaKnown RBP1.12□□□□□ -2.23
UBR1-205ENST00000564540 BTG2P78543 158 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 OR2T2Q6IF00 324 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 LINC00299Q6ZSB3 139 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 LSM10Q969L4 123 aaKnown RBP1.12□□□□□ -2.23
UBR1-205ENST00000564540 OBSCN-AS1Q96MR7 158 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 MRPL36Q9P0J6 103 aaKnown RBP1.12□□□□□ -2.23
UBR1-205ENST00000564540 MCM3APO60318 1980 aa1.12□□□□□ -2.23
UBR1-205ENST00000564540 ARFGEF3Q5TH69 2177 aa1.11□□□□□ -2.23
UBR1-205ENST00000564540 PTPRDP23468 1912 aa1.11□□□□□ -2.23
UBR1-205ENST00000564540 TRAV23DV6A0A075B6W5 121 aa1.11□□□□□ -2.23
UBR1-205ENST00000564540 TRAV2A0A0B4J234 112 aa1.11□□□□□ -2.23
UBR1-205ENST00000564540 NUPR2A6NF83 97 aa1.11□□□□□ -2.23
UBR1-205ENST00000564540 PIRTP0C851 137 aa1.11□□□□□ -2.23
UBR1-205ENST00000564540 IQCJQ1A5X6 159 aa1.11□□□□□ -2.23
UBR1-205ENST00000564540 GDF5OSQ5U4N7 250 aa1.11□□□□□ -2.23
UBR1-205ENST00000564540 ODF3Q96PU9 254 aa1.11□□□□□ -2.23
UBR1-205ENST00000564540 C12orf57Q99622 126 aa1.11□□□□□ -2.23
UBR1-205ENST00000564540 RERGLQ9H628 205 aa1.11□□□□□ -2.23
UBR1-205ENST00000564540 TMEM242Q9NWH2 141 aa1.11□□□□□ -2.23
UBR1-205ENST00000564540 NDUFA12Q9UI09 145 aa1.11□□□□□ -2.23
UBR1-205ENST00000564540 BOKQ9UMX3 212 aaPredicted RBP1.11□□□□□ -2.23
UBR1-205ENST00000564540 COL6A6A6NMZ7 2263 aa1.11□□□□□ -2.23
UBR1-205ENST00000564540 INTS1Q8N201 2190 aaKnown RBP1.11□□□□□ -2.23
UBR1-205ENST00000564540 CASP8AP2Q9UKL3 1982 aa1.1□□□□□ -2.23
UBR1-205ENST00000564540 COL4A1P02462 1669 aa1.1□□□□□ -2.23
UBR1-205ENST00000564540 RIMS1Q86UR5 1692 aaKnown RBP1.1□□□□□ -2.23
UBR1-205ENST00000564540 CHD3Q12873 2000 aaKnown RBP1.1□□□□□ -2.23
UBR1-205ENST00000564540 NAIPQ13075 1403 aa1.1□□□□□ -2.23
UBR1-205ENST00000564540 IGLV3-32A0A0A0MS00 114 aa1.1□□□□□ -2.23
UBR1-205ENST00000564540 IL5P05113 134 aa1.1□□□□□ -2.23
UBR1-205ENST00000564540 GYPBP06028 91 aa1.1□□□□□ -2.23
UBR1-205ENST00000564540 KRTAP10-4P60372 401 aaPredicted RBP1.1□□□□□ -2.23
UBR1-205ENST00000564540 UNQ5815/PRO19632Q6UWF5 114 aa1.1□□□□□ -2.23
UBR1-205ENST00000564540 PPDPFLQ8WWR9 84 aa1.1□□□□□ -2.23
UBR1-205ENST00000564540 C14orf144Q96I85 54 aa1.1□□□□□ -2.23
UBR1-205ENST00000564540 C22orf24Q9Y442 160 aa1.1□□□□□ -2.23
UBR1-205ENST00000564540 AKAP11Q9UKA4 1901 aa1.1□□□□□ -2.23
UBR1-205ENST00000564540 CTTNBP2Q8WZ74 1663 aa1.1□□□□□ -2.23
UBR1-205ENST00000564540 NINQ8N4C6 2090 aa1.09□□□□□ -2.23
UBR1-205ENST00000564540 MYO18AQ92614 2054 aaKnown RBP1.09□□□□□ -2.23
UBR1-205ENST00000564540 ATG2AQ2TAZ0 1938 aa1.09□□□□□ -2.23
UBR1-205ENST00000564540 IGKV2-29A2NJV5 120 aaPredicted RBP1.09□□□□□ -2.23
UBR1-205ENST00000564540 SNAPC5O75971 98 aa1.09□□□□□ -2.23
UBR1-205ENST00000564540 NDUFB6O95139 128 aa1.09□□□□□ -2.23
UBR1-205ENST00000564540 IL9P15248 144 aa1.09□□□□□ -2.23
UBR1-205ENST00000564540 SPANXN1Q5VSR9 72 aa1.09□□□□□ -2.23
UBR1-205ENST00000564540 SPTSSAQ969W0 71 aa1.09□□□□□ -2.23
UBR1-205ENST00000564540 DMAC1Q96GE9 116 aa1.09□□□□□ -2.23
UBR1-205ENST00000564540 NAA60Q9H7X0 242 aa1.09□□□□□ -2.23
UBR1-205ENST00000564540 SERP1Q9Y6X1 66 aa1.09□□□□□ -2.23
UBR1-205ENST00000564540 CFTRP13569 1480 aa1.09□□□□□ -2.24
UBR1-205ENST00000564540 PTPRMP28827 1452 aa1.09□□□□□ -2.24
UBR1-205ENST00000564540 ZNF518AQ6AHZ1 1483 aa1.09□□□□□ -2.24
UBR1-205ENST00000564540 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
UBR1-205ENST00000564540 PHRF1Q9P1Y6 1649 aaKnown RBP1.08□□□□□ -2.24
UBR1-205ENST00000564540 PLXNA2O75051 1894 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 TRBV10-1A0A0K0K1A3 114 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 MCRIP1C9JLW8 97 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 SNCGO76070 127 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 FXYD4P59646 89 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 MRPS10P82664 201 aaKnown RBP1.08□□□□□ -2.24
UBR1-205ENST00000564540 SPATA45Q537H7 98 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 Q56UQ5 140 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 Q6ZS92 163 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 SBSPONQ8IVN8 264 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 PLPP5Q8NEB5 264 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 COPS9Q8WXC6 57 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 LINC00526Q96FQ7 95 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 TMEM141Q96I45 108 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 ATG5Q9H1Y0 275 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 FAM135AQ9P2D6 1515 aa1.08□□□□□ -2.24
UBR1-205ENST00000564540 EIF4G3O43432 1585 aaKnown RBP1.08□□□□□ -2.24
UBR1-205ENST00000564540 MYH9P35579 1960 aaKnown RBP1.07□□□□□ -2.24
UBR1-205ENST00000564540 IGKV2-40A0A087WW87 121 aaPredicted RBP1.07□□□□□ -2.24
UBR1-205ENST00000564540 C20orf202A1L168 122 aa1.07□□□□□ -2.24
UBR1-205ENST00000564540 IGKV2D-40P01614 121 aaPredicted RBP1.07□□□□□ -2.24
UBR1-205ENST00000564540 CCKP06307 115 aa1.07□□□□□ -2.24
UBR1-205ENST00000564540 PIPP12273 146 aaPredicted RBP1.07□□□□□ -2.24
UBR1-205ENST00000564540 GNG4P50150 75 aa1.07□□□□□ -2.24
UBR1-205ENST00000564540 RPL37AP61513 92 aaKnown RBP1.07□□□□□ -2.24
UBR1-205ENST00000564540 UBE2G1P62253 170 aa1.07□□□□□ -2.24
UBR1-205ENST00000564540 C9orf116Q5BN46 136 aaPredicted RBP1.07□□□□□ -2.24
UBR1-205ENST00000564540 S100A7L2Q5SY68 101 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms