RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 PLECQ15149 4684 aaKnown RBP11.74□□□□□ -0.53
RNF40-206ENST00000564260 A8MWV9 139 aa11.73□□□□□ -0.53
RNF40-206ENST00000564260 P01737 135 aa11.73□□□□□ -0.53
RNF40-206ENST00000564260 OR5AL1P0C617 328 aa11.73□□□□□ -0.53
RNF40-206ENST00000564260 LINC00476Q8WZB0 136 aa11.73□□□□□ -0.53
RNF40-206ENST00000564260 SMIM7Q9BQ49 75 aa11.73□□□□□ -0.53
RNF40-206ENST00000564260 PRO0255Q9UI72 69 aa11.73□□□□□ -0.53
RNF40-206ENST00000564260 ARMS2P0C7Q2 107 aa11.72□□□□□ -0.53
RNF40-206ENST00000564260 P0DMU3 169 aa11.72□□□□□ -0.53
RNF40-206ENST00000564260 FAM231AP0DMU4 169 aa11.72□□□□□ -0.53
RNF40-206ENST00000564260 FAM231CP0DMU5 169 aa11.72□□□□□ -0.53
RNF40-206ENST00000564260 FAM231DQ6ZW35 169 aa11.72□□□□□ -0.53
RNF40-206ENST00000564260 OR4C5Q8NGB2 326 aa11.72□□□□□ -0.53
RNF40-206ENST00000564260 SSBP4Q9BWG4 385 aaPredicted RBP11.72□□□□□ -0.53
RNF40-206ENST00000564260 PHLDA3Q9Y5J5 127 aa11.72□□□□□ -0.53
RNF40-206ENST00000564260 KMT2CQ8NEZ4 4911 aaKnown RBP11.72□□□□□ -0.53
RNF40-206ENST00000564260 LYSTQ99698 3801 aa11.71□□□□□ -0.53
RNF40-206ENST00000564260 ZNF727A8MUV8 499 aa11.71□□□□□ -0.53
RNF40-206ENST00000564260 H3BVH4 76 aa11.71□□□□□ -0.53
RNF40-206ENST00000564260 SNAI2O43623 268 aa11.71□□□□□ -0.53
RNF40-206ENST00000564260 FAM3BP58499 235 aaPredicted RBP11.71□□□□□ -0.53
RNF40-206ENST00000564260 ZFP2Q6ZN57 461 aa11.71□□□□□ -0.53
RNF40-206ENST00000564260 ZNF575Q86XF7 245 aa11.71□□□□□ -0.53
RNF40-206ENST00000564260 ZFP82Q8N141 532 aa11.71□□□□□ -0.53
RNF40-206ENST00000564260 OCC1Q8TAD7 63 aa11.71□□□□□ -0.53
RNF40-206ENST00000564260 A0A1W2PPQ1 181 aa11.7□□□□□ -0.54
RNF40-206ENST00000564260 RHODO00212 210 aa11.7□□□□□ -0.54
RNF40-206ENST00000564260 RS1O15537 224 aa11.7□□□□□ -0.54
RNF40-206ENST00000564260 NXPH4O95158 308 aa11.7□□□□□ -0.54
RNF40-206ENST00000564260 HOXA5P20719 270 aa11.7□□□□□ -0.54
RNF40-206ENST00000564260 RNF212Q495C1 297 aa11.7□□□□□ -0.54
RNF40-206ENST00000564260 TRAV26-1A0A087WT03 109 aa11.69□□□□□ -0.54
RNF40-206ENST00000564260 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
RNF40-206ENST00000564260 F2Z2F3 143 aa11.69□□□□□ -0.54
RNF40-206ENST00000564260 FHL2Q14192 279 aa11.69□□□□□ -0.54
RNF40-206ENST00000564260 CT83Q5H943 113 aa11.69□□□□□ -0.54
RNF40-206ENST00000564260 CFAP126Q5VTH2 177 aa11.69□□□□□ -0.54
RNF40-206ENST00000564260 OR2D3Q8NGH3 330 aa11.69□□□□□ -0.54
RNF40-206ENST00000564260 HHLA3Q9XRX5 114 aa11.69□□□□□ -0.54
RNF40-206ENST00000564260 TMSB15BA0A087X1C1 80 aa11.68□□□□□ -0.54
RNF40-206ENST00000564260 GRIFINA4D1Z8 144 aa11.68□□□□□ -0.54
RNF40-206ENST00000564260 PGPEP1LA6NFU8 196 aa11.68□□□□□ -0.54
RNF40-206ENST00000564260 CEBPGP53567 150 aa11.68□□□□□ -0.54
RNF40-206ENST00000564260 CRYBA4P53673 196 aa11.68□□□□□ -0.54
RNF40-206ENST00000564260 LINC01551Q86U37 167 aa11.68□□□□□ -0.54
RNF40-206ENST00000564260 POM121L12Q8N7R1 296 aa11.68□□□□□ -0.54
RNF40-206ENST00000564260 PCNPQ8WW12 178 aaKnown RBP11.68□□□□□ -0.54
RNF40-206ENST00000564260 ZNF479Q96JC4 524 aa11.68□□□□□ -0.54
RNF40-206ENST00000564260 ALMS1Q8TCU4 4167 aa11.67□□□□□ -0.54
RNF40-206ENST00000564260 K7EN84 100 aa11.67□□□□□ -0.54
RNF40-206ENST00000564260 PAX4O43316 350 aa11.67□□□□□ -0.54
RNF40-206ENST00000564260 IFITM2Q01629 132 aa11.67□□□□□ -0.54
RNF40-206ENST00000564260 TMEM241Q24JQ0 296 aa11.67□□□□□ -0.54
RNF40-206ENST00000564260 WDR73Q6P4I2 378 aa11.67□□□□□ -0.54
RNF40-206ENST00000564260 SH2D6Q7Z4S9 175 aa11.67□□□□□ -0.54
RNF40-206ENST00000564260 NUDT10Q8NFP7 164 aa11.67□□□□□ -0.54
RNF40-206ENST00000564260 NUDT11Q96G61 164 aa11.67□□□□□ -0.54
RNF40-206ENST00000564260 RPP21Q9H633 154 aaKnown RBP11.67□□□□□ -0.54
RNF40-206ENST00000564260 TRBV6-4A0A1B0GX49 114 aa11.66□□□□□ -0.54
RNF40-206ENST00000564260 IGLC6P0CF74 106 aa11.66□□□□□ -0.54
RNF40-206ENST00000564260 GATA1P15976 413 aaPredicted RBP11.66□□□□□ -0.54
RNF40-206ENST00000564260 CACNG7P62955 275 aa11.66□□□□□ -0.54
RNF40-206ENST00000564260 RPL19P84098 196 aaKnown RBP11.66□□□□□ -0.54
RNF40-206ENST00000564260 SOHLH1Q5JUK2 328 aa11.66□□□□□ -0.54
RNF40-206ENST00000564260 SFRP2Q96HF1 295 aa11.66□□□□□ -0.54
RNF40-206ENST00000564260 NAT8Q9UHE5 227 aa11.66□□□□□ -0.54
RNF40-206ENST00000564260 MUC4Q99102 2169 aa11.66□□□□□ -0.54
RNF40-206ENST00000564260 DNAH1Q9P2D7 4330 aa11.66□□□□□ -0.54
RNF40-206ENST00000564260 FAM231BA6NCW3 169 aa11.65□□□□□ -0.54
RNF40-206ENST00000564260 IGHV3-53P01767 116 aa11.65□□□□□ -0.54
RNF40-206ENST00000564260 MRPL23Q16540 153 aaKnown RBP11.65□□□□□ -0.54
RNF40-206ENST00000564260 DMRTA1Q5VZB9 504 aa11.65□□□□□ -0.54
RNF40-206ENST00000564260 UQCC3Q6UW78 93 aa11.65□□□□□ -0.54
RNF40-206ENST00000564260 FER1L6-AS1Q8NA97 138 aa11.65□□□□□ -0.54
RNF40-206ENST00000564260 VSIG2Q96IQ7 327 aa11.65□□□□□ -0.54
RNF40-206ENST00000564260 OSTCQ9NRP0 149 aa11.65□□□□□ -0.54
RNF40-206ENST00000564260 ICOSQ9Y6W8 199 aa11.65□□□□□ -0.54
RNF40-206ENST00000564260 A8MWL6 223 aa11.64□□□□□ -0.55
RNF40-206ENST00000564260 LY6G6CO95867 125 aa11.64□□□□□ -0.55
RNF40-206ENST00000564260 NUDT3O95989 172 aa11.64□□□□□ -0.55
RNF40-206ENST00000564260 SFTA3P0C7M3 94 aa11.64□□□□□ -0.55
RNF40-206ENST00000564260 CCL18P55774 89 aa11.64□□□□□ -0.55
RNF40-206ENST00000564260 ERVFC1-1P60608 527 aa11.64□□□□□ -0.55
RNF40-206ENST00000564260 RHOHQ15669 191 aa11.64□□□□□ -0.55
RNF40-206ENST00000564260 SPANXN1Q5VSR9 72 aa11.64□□□□□ -0.55
RNF40-206ENST00000564260 PRADC1Q9BSG0 188 aa11.64□□□□□ -0.55
RNF40-206ENST00000564260 CNFNQ9BYD5 112 aa11.64□□□□□ -0.55
RNF40-206ENST00000564260 SACSQ9NZJ4 4579 aa11.63□□□□□ -0.55
RNF40-206ENST00000564260 C9JQL5 133 aa11.63□□□□□ -0.55
RNF40-206ENST00000564260 M0R381 172 aa11.63□□□□□ -0.55
RNF40-206ENST00000564260 GATCO43716 136 aaKnown RBP11.63□□□□□ -0.55
RNF40-206ENST00000564260 CTRLP40313 264 aa11.63□□□□□ -0.55
RNF40-206ENST00000564260 UFSP1Q6NVU6 142 aa11.63□□□□□ -0.55
RNF40-206ENST00000564260 C15orf54Q8N8G6 183 aa11.63□□□□□ -0.55
RNF40-206ENST00000564260 GFRA4Q9GZZ7 299 aa11.63□□□□□ -0.55
RNF40-206ENST00000564260 RNASE7Q9H1E1 156 aaKnown RBP11.63□□□□□ -0.55
RNF40-206ENST00000564260 A0A0J9YY99 117 aa11.62□□□□□ -0.55
RNF40-206ENST00000564260 FOXA3P55318 350 aaPredicted RBP11.62□□□□□ -0.55
RNF40-206ENST00000564260 SRSF3P84103 164 aaKnown RBP11.62□□□□□ -0.55
RNF40-206ENST00000564260 AP1S3Q96PC3 154 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms