RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 CSMD1Q96PZ7 3565 aa8.52□□□□□ -1.05
TCF4-222ENST00000564228 GAGE12JA6NER3 117 aa8.52□□□□□ -1.05
TCF4-222ENST00000564228 LINC01549A6NIU2 74 aa8.52□□□□□ -1.05
TCF4-222ENST00000564228 M0R1W7 72 aa8.52□□□□□ -1.05
TCF4-222ENST00000564228 M0R3E3 92 aa8.52□□□□□ -1.05
TCF4-222ENST00000564228 GAGE7O76087 117 aa8.52□□□□□ -1.05
TCF4-222ENST00000564228 IGKV1-17P01599 117 aa8.52□□□□□ -1.05
TCF4-222ENST00000564228 GAGE12FP0CL80 117 aa8.52□□□□□ -1.05
TCF4-222ENST00000564228 GAGE12GP0CL81 117 aa8.52□□□□□ -1.05
TCF4-222ENST00000564228 GAGE12IP0CL82 117 aa8.52□□□□□ -1.05
TCF4-222ENST00000564228 GAGE4Q13068 117 aa8.52□□□□□ -1.05
TCF4-222ENST00000564228 LRRC75A-AS1Q8N1F1 130 aa8.52□□□□□ -1.05
TCF4-222ENST00000564228 SRSF8Q9BRL6 282 aaKnown RBP8.52□□□□□ -1.05
TCF4-222ENST00000564228 SHISA2Q6UWI4 295 aa8.51□□□□□ -1.05
TCF4-222ENST00000564228 VMO1Q7Z5L0 202 aa8.51□□□□□ -1.05
TCF4-222ENST00000564228 PDZD2O15018 2839 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 IGHV3-21A0A0B4J1V1 117 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 TEX22C9J3V5 150 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 NDUFV3P56181 108 aaKnown RBP8.5□□□□□ -1.05
TCF4-222ENST00000564228 TMEM78Q5T7P6 136 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 IL17RELQ6ZVW7 336 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 MAPK1IP1LQ8NDC0 245 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 RNF125Q96EQ8 232 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 CREBBPQ92793 2442 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 LOC107984156A0A0G2JMH3 177 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 CENPVL3A0A0U1RRI6 287 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 DIAPH2-AS1Q14236 149 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 ZNF575Q86XF7 245 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 ARL17AQ8IVW1 177 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 ZNF491Q8N8L2 437 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 PTH2Q96A98 100 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 Q96MF0 132 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 FBXL15Q9H469 300 aa8.5□□□□□ -1.05
TCF4-222ENST00000564228 ABCA1O95477 2261 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 ZANQ9Y493 2812 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 ITPR3Q14573 2671 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 NDUFA3O95167 84 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 GAS8-AS1O95177 125 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 CD7P09564 240 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 PRTN3P24158 256 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 RPL32P62910 135 aaKnown RBP8.49□□□□□ -1.05
TCF4-222ENST00000564228 HERV-K104P63124 156 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 GAGE2BQ13066 116 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 GAGE2EQ4V326 116 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 ANKRD29Q8N6D5 301 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 SIRPDQ9H106 197 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 GAGE2DQ9UEU5 116 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 SIGLEC9Q9Y336 463 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 CELSR1Q9NYQ6 3014 aa8.49□□□□□ -1.05
TCF4-222ENST00000564228 FABP5P3A8MUU1 101 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 IGLV1-47P01700 117 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 MSMBP08118 114 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 C1orf122Q6ZSJ8 110 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 NRACQ8N912 160 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 MSRB1Q9NZV6 116 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 A0A096LNT2 108 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 B4DSR2 109 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 BUB1B-PAK6H3BSN5 160 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 SNCGO76070 127 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 TCL1BO95988 128 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 ZNF80P51504 273 aaPredicted RBP8.48□□□□□ -1.05
TCF4-222ENST00000564228 ZFP2Q6ZN57 461 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 KRTAP1-3Q8IUG1 177 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 LINC01600Q96MT4 127 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 CSPG4Q6UVK1 2322 aa8.48□□□□□ -1.05
TCF4-222ENST00000564228 SVEP1Q4LDE5 3571 aa8.47□□□□□ -1.05
TCF4-222ENST00000564228 IGKV2-40A0A087WW87 121 aaPredicted RBP8.47□□□□□ -1.05
TCF4-222ENST00000564228 IGKV2D-40P01614 121 aaPredicted RBP8.47□□□□□ -1.05
TCF4-222ENST00000564228 IFITM1P13164 125 aa8.47□□□□□ -1.05
TCF4-222ENST00000564228 NDUFA11Q86Y39 141 aa8.47□□□□□ -1.05
TCF4-222ENST00000564228 TNFRSF18Q9Y5U5 241 aa8.47□□□□□ -1.05
TCF4-222ENST00000564228 K7EIM0 57 aa8.46□□□□□ -1.05
TCF4-222ENST00000564228 PLXNB1O43157 2135 aa8.46□□□□□ -1.05
TCF4-222ENST00000564228 ORM1P02763 201 aa8.46□□□□□ -1.05
TCF4-222ENST00000564228 GATA1P15976 413 aaPredicted RBP8.46□□□□□ -1.05
TCF4-222ENST00000564228 NEXN-AS1Q8NBZ9 246 aa8.46□□□□□ -1.05
TCF4-222ENST00000564228 WFDC11Q8NEX6 87 aa8.46□□□□□ -1.05
TCF4-222ENST00000564228 AJUBAQ96IF1 538 aa8.46□□□□□ -1.05
TCF4-222ENST00000564228 PRADC1Q9BSG0 188 aa8.46□□□□□ -1.05
TCF4-222ENST00000564228 HIF1ANQ9NWT6 349 aa8.46□□□□□ -1.05
TCF4-222ENST00000564228 FLNAP21333 2647 aaKnown RBP8.46□□□□□ -1.05
TCF4-222ENST00000564228 NOTCH2Q04721 2471 aa8.46□□□□□ -1.06
TCF4-222ENST00000564228 IGHV3-72A0A0B4J1Y9 119 aa8.46□□□□□ -1.06
TCF4-222ENST00000564228 ZNF815PA8K554 130 aa8.46□□□□□ -1.06
TCF4-222ENST00000564228 SCGB1C2P0DMR2 95 aa8.46□□□□□ -1.06
TCF4-222ENST00000564228 ORMDL2Q53FV1 153 aa8.46□□□□□ -1.06
TCF4-222ENST00000564228 TTC32Q5I0X7 151 aa8.46□□□□□ -1.06
TCF4-222ENST00000564228 PPP1R27Q86WC6 154 aa8.46□□□□□ -1.06
TCF4-222ENST00000564228 LINC01356Q8N9X3 169 aa8.46□□□□□ -1.06
TCF4-222ENST00000564228 MYO9AB2RTY4 2548 aa8.45□□□□□ -1.06
TCF4-222ENST00000564228 IGHV3OR16-10A0A075B7F0 116 aa8.45□□□□□ -1.06
TCF4-222ENST00000564228 ODF3BA8MYP8 253 aa8.45□□□□□ -1.06
TCF4-222ENST00000564228 RPL7P18124 248 aaKnown RBP8.45□□□□□ -1.06
TCF4-222ENST00000564228 SRSF9Q13242 221 aaKnown RBP eCLIP8.45□□□□□ -1.06
TCF4-222ENST00000564228 TOMM6Q96B49 74 aa8.45□□□□□ -1.06
TCF4-222ENST00000564228 DPM3Q9P2X0 92 aa8.45□□□□□ -1.06
TCF4-222ENST00000564228 TEX15Q9BXT5 2789 aa8.45□□□□□ -1.06
TCF4-222ENST00000564228 TLN2Q9Y4G6 2542 aa8.45□□□□□ -1.06
TCF4-222ENST00000564228 IGHV4-4A0A075B6R2 117 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 IGHV1-3A0A0C4DH29 117 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms