RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 RNF152Q8N8N0 203 aa13.53□□□□□ -0.24
GDE1-203ENST00000564172 HIVEP1P15822 2718 aa13.52□□□□□ -0.24
GDE1-203ENST00000564172 MYOZ3Q8TDC0 251 aa13.52□□□□□ -0.24
GDE1-203ENST00000564172 INAFM1C9JVW0 142 aa13.52□□□□□ -0.25
GDE1-203ENST00000564172 RHODO00212 210 aa13.52□□□□□ -0.25
GDE1-203ENST00000564172 MRPS12O15235 138 aaKnown RBP13.52□□□□□ -0.25
GDE1-203ENST00000564172 H3BMG7 143 aa13.51□□□□□ -0.25
GDE1-203ENST00000564172 CSDC2Q9Y534 153 aaKnown RBP13.51□□□□□ -0.25
GDE1-203ENST00000564172 A0A1B0GXF2 115 aa13.5□□□□□ -0.25
GDE1-203ENST00000564172 H3BTX0 84 aa13.5□□□□□ -0.25
GDE1-203ENST00000564172 NDUFA4O00483 81 aa13.5□□□□□ -0.25
GDE1-203ENST00000564172 IGLV2-8P01709 118 aa13.5□□□□□ -0.25
GDE1-203ENST00000564172 C18orf15Q96N68 181 aa13.5□□□□□ -0.25
GDE1-203ENST00000564172 IGLL5B9A064 214 aa13.49□□□□□ -0.25
GDE1-203ENST00000564172 BUB3O43684 328 aa13.49□□□□□ -0.25
GDE1-203ENST00000564172 UNQ9165/PRO28630Q6UXU0 137 aa13.49□□□□□ -0.25
GDE1-203ENST00000564172 NUP35Q8NFH5 326 aa13.49□□□□□ -0.25
GDE1-203ENST00000564172 UBE2E2Q96LR5 201 aa13.49□□□□□ -0.25
GDE1-203ENST00000564172 METTL26Q96S19 204 aa13.49□□□□□ -0.25
GDE1-203ENST00000564172 PPDPFQ9H3Y8 114 aa13.49□□□□□ -0.25
GDE1-203ENST00000564172 BAHCC1Q9P281 2608 aa13.49□□□□□ -0.25
GDE1-203ENST00000564172 A0A1B0GWB2 263 aa13.49□□□□□ -0.25
GDE1-203ENST00000564172 PRSS29PA6NIE9 313 aa13.49□□□□□ -0.25
GDE1-203ENST00000564172 MYCNOSP40205 109 aa13.49□□□□□ -0.25
GDE1-203ENST00000564172 PRELID3AQ96N28 172 aa13.49□□□□□ -0.25
GDE1-203ENST00000564172 TMEM213A2RRL7 107 aa13.48□□□□□ -0.25
GDE1-203ENST00000564172 TMEM262E9PQX1 116 aa13.48□□□□□ -0.25
GDE1-203ENST00000564172 RPL7P18124 248 aaKnown RBP13.48□□□□□ -0.25
GDE1-203ENST00000564172 NDUFV3P56181 108 aaKnown RBP13.48□□□□□ -0.25
GDE1-203ENST00000564172 C17orf77Q96MU5 243 aa13.48□□□□□ -0.25
GDE1-203ENST00000564172 ZNF747Q9BV97 191 aa13.48□□□□□ -0.25
GDE1-203ENST00000564172 MAP1LC3AQ9H492 121 aa13.48□□□□□ -0.25
GDE1-203ENST00000564172 U3KQE9 123 aa13.48□□□□□ -0.25
GDE1-203ENST00000564172 NF1P21359 2839 aa13.48□□□□□ -0.25
GDE1-203ENST00000564172 TRBV19A0A075B6N1 114 aa13.47□□□□□ -0.25
GDE1-203ENST00000564172 APOHP02749 345 aaPredicted RBP13.47□□□□□ -0.25
GDE1-203ENST00000564172 LGALS9BQ3B8N2 356 aa13.47□□□□□ -0.25
GDE1-203ENST00000564172 LGALS9CQ6DKI2 356 aa13.47□□□□□ -0.25
GDE1-203ENST00000564172 Q6Q795 121 aa13.47□□□□□ -0.25
GDE1-203ENST00000564172 PGPA6NDG6 321 aa13.47□□□□□ -0.25
GDE1-203ENST00000564172 CCDC179H3BU77 68 aa13.47□□□□□ -0.25
GDE1-203ENST00000564172 LGALS1P09382 135 aaKnown RBP13.47□□□□□ -0.25
GDE1-203ENST00000564172 IGF2BP2-AS1Q96M15 143 aa13.47□□□□□ -0.25
GDE1-203ENST00000564172 Q9H3A6 140 aa13.47□□□□□ -0.25
GDE1-203ENST00000564172 IGHV3OR16-13A0A075B7E8 117 aa13.46□□□□□ -0.25
GDE1-203ENST00000564172 IGHV3-74A0A0B4J1X5 117 aa13.46□□□□□ -0.25
GDE1-203ENST00000564172 TMEM190Q8WZ59 177 aa13.46□□□□□ -0.25
GDE1-203ENST00000564172 C16orf95Q9H693 158 aa13.46□□□□□ -0.25
GDE1-203ENST00000564172 IGHV3-49A0A0A0MS15 119 aa13.45□□□□□ -0.26
GDE1-203ENST00000564172 IGHV3-66A0A0C4DH42 116 aa13.45□□□□□ -0.26
GDE1-203ENST00000564172 SMAD5-AS1Q9Y6J3 95 aa13.45□□□□□ -0.26
GDE1-203ENST00000564172 FN1P02751 2386 aaKnown RBP13.45□□□□□ -0.26
GDE1-203ENST00000564172 FXYD2P54710 66 aa13.45□□□□□ -0.26
GDE1-203ENST00000564172 FHL3Q13643 280 aa13.45□□□□□ -0.26
GDE1-203ENST00000564172 GPHB5Q86YW7 130 aa13.45□□□□□ -0.26
GDE1-203ENST00000564172 LINC01006Q8NI28 216 aa13.45□□□□□ -0.26
GDE1-203ENST00000564172 TMEM78Q5T7P6 136 aa13.44□□□□□ -0.26
GDE1-203ENST00000564172 TPPP3Q9BW30 176 aa13.44□□□□□ -0.26
GDE1-203ENST00000564172 EPDR1Q9UM22 224 aa13.44□□□□□ -0.26
GDE1-203ENST00000564172 NSD1Q96L73 2696 aaPredicted RBP13.44□□□□□ -0.26
GDE1-203ENST00000564172 SLC25A5P05141 298 aaKnown RBP13.44□□□□□ -0.26
GDE1-203ENST00000564172 CSN1S1P47710 185 aa13.44□□□□□ -0.26
GDE1-203ENST00000564172 PDE6HQ13956 83 aa13.44□□□□□ -0.26
GDE1-203ENST00000564172 FAM106AQ4KMX7 169 aa13.44□□□□□ -0.26
GDE1-203ENST00000564172 SIGLEC15Q6ZMC9 328 aa13.44□□□□□ -0.26
GDE1-203ENST00000564172 EXOC3-AS1Q8N2X6 119 aa13.44□□□□□ -0.26
GDE1-203ENST00000564172 PPDPFLQ8WWR9 84 aa13.44□□□□□ -0.26
GDE1-203ENST00000564172 MCRIP2Q9BUT9 160 aaKnown RBP13.44□□□□□ -0.26
GDE1-203ENST00000564172 OTORQ9NRC9 128 aa13.44□□□□□ -0.26
GDE1-203ENST00000564172 GCSHP23434 173 aa13.43□□□□□ -0.26
GDE1-203ENST00000564172 TCTAP57738 103 aa13.43□□□□□ -0.26
GDE1-203ENST00000564172 HBBP68871 147 aa13.43□□□□□ -0.26
GDE1-203ENST00000564172 LYPD1Q8N2G4 141 aa13.43□□□□□ -0.26
GDE1-203ENST00000564172 DNAJC30Q96LL9 226 aa13.43□□□□□ -0.26
GDE1-203ENST00000564172 A8MWL6 223 aa13.43□□□□□ -0.26
GDE1-203ENST00000564172 IFITM1P13164 125 aa13.43□□□□□ -0.26
GDE1-203ENST00000564172 EVI2AP22794 236 aa13.43□□□□□ -0.26
GDE1-203ENST00000564172 GNG5P63218 68 aa13.43□□□□□ -0.26
GDE1-203ENST00000564172 C18orf65Q6ZTR6 163 aa13.43□□□□□ -0.26
GDE1-203ENST00000564172 IGHV4OR15-8A0A075B7B6 117 aa13.42□□□□□ -0.26
GDE1-203ENST00000564172 A0A087WW49 117 aa13.42□□□□□ -0.26
GDE1-203ENST00000564172 PEX7O00628 323 aa13.42□□□□□ -0.26
GDE1-203ENST00000564172 CRLF1O75462 422 aa13.42□□□□□ -0.26
GDE1-203ENST00000564172 TM4SF20Q53R12 229 aa13.42□□□□□ -0.26
GDE1-203ENST00000564172 GAGE2BQ13066 116 aa13.41□□□□□ -0.26
GDE1-203ENST00000564172 GAGE2EQ4V326 116 aa13.41□□□□□ -0.26
GDE1-203ENST00000564172 CFAP126Q5VTH2 177 aa13.41□□□□□ -0.26
GDE1-203ENST00000564172 LINC00479Q96M42 142 aa13.41□□□□□ -0.26
GDE1-203ENST00000564172 DAZ1Q9NQZ3 744 aaKnown RBP13.41□□□□□ -0.26
GDE1-203ENST00000564172 GAGE2DQ9UEU5 116 aa13.41□□□□□ -0.26
GDE1-203ENST00000564172 F8P00451 2351 aa13.41□□□□□ -0.26
GDE1-203ENST00000564172 ZNF785A8K8V0 405 aa13.41□□□□□ -0.26
GDE1-203ENST00000564172 K7EMT4 169 aa13.41□□□□□ -0.26
GDE1-203ENST00000564172 TAL2Q16559 108 aa13.41□□□□□ -0.26
GDE1-203ENST00000564172 SMIM9A6NGZ8 99 aa13.4□□□□□ -0.26
GDE1-203ENST00000564172 NDUFA7O95182 113 aa13.4□□□□□ -0.26
GDE1-203ENST00000564172 CAMPP49913 170 aa13.4□□□□□ -0.26
GDE1-203ENST00000564172 TTC32Q5I0X7 151 aa13.4□□□□□ -0.26
GDE1-203ENST00000564172 CEND1Q8N111 149 aa13.4□□□□□ -0.26
GDE1-203ENST00000564172 TCRAP04437 139 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms