RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 C16orf74Q96GX8 76 aa10.96□□□□□ -0.65
RNF40-205ENST00000563909 IGHV1OR15-1A0A075B7D0 117 aa10.95□□□□□ -0.66
RNF40-205ENST00000563909 GCGP01275 180 aa10.95□□□□□ -0.66
RNF40-205ENST00000563909 AZU1P20160 251 aa10.95□□□□□ -0.66
RNF40-205ENST00000563909 RPL35P42766 123 aaKnown RBP10.95□□□□□ -0.66
RNF40-205ENST00000563909 ERVFC1-1P60608 527 aa10.95□□□□□ -0.66
RNF40-205ENST00000563909 IFITM2Q01629 132 aa10.95□□□□□ -0.66
RNF40-205ENST00000563909 Q6ZRN7 208 aaPredicted RBP10.95□□□□□ -0.66
RNF40-205ENST00000563909 COX8CQ7Z4L0 72 aa10.95□□□□□ -0.66
RNF40-205ENST00000563909 BAGE2Q86Y30 109 aa10.95□□□□□ -0.66
RNF40-205ENST00000563909 TMEM183AQ8IXX5 376 aa10.95□□□□□ -0.66
RNF40-205ENST00000563909 CBY3A6NI87 242 aa10.94□□□□□ -0.66
RNF40-205ENST00000563909 TMEM250H0YL14 139 aa10.94□□□□□ -0.66
RNF40-205ENST00000563909 PFN1P07737 140 aaKnown RBP10.94□□□□□ -0.66
RNF40-205ENST00000563909 ANXA2RQ3ZCQ2 193 aa10.94□□□□□ -0.66
RNF40-205ENST00000563909 FAM159AQ6UWV7 190 aa10.94□□□□□ -0.66
RNF40-205ENST00000563909 TMEM263Q8WUH6 116 aaKnown RBP10.94□□□□□ -0.66
RNF40-205ENST00000563909 LRP1Q07954 4544 aaKnown RBP10.94□□□□□ -0.66
RNF40-205ENST00000563909 FABP5P3A8MUU1 101 aa10.93□□□□□ -0.66
RNF40-205ENST00000563909 ZNF80P51504 273 aaPredicted RBP10.93□□□□□ -0.66
RNF40-205ENST00000563909 Q6ZQT7 251 aa10.93□□□□□ -0.66
RNF40-205ENST00000563909 RNASE8Q8TDE3 154 aaKnown RBP10.93□□□□□ -0.66
RNF40-205ENST00000563909 DERL1Q9BUN8 251 aa10.93□□□□□ -0.66
RNF40-205ENST00000563909 ATP5G1P05496 136 aa10.92□□□□□ -0.66
RNF40-205ENST00000563909 PEA15Q15121 130 aa10.92□□□□□ -0.66
RNF40-205ENST00000563909 CLLU1Q5K131 121 aa10.92□□□□□ -0.66
RNF40-205ENST00000563909 MUC21Q5SSG8 566 aa10.92□□□□□ -0.66
RNF40-205ENST00000563909 ZC2HC1AQ96GY0 325 aa10.92□□□□□ -0.66
RNF40-205ENST00000563909 KCNS1Q96KK3 526 aa10.92□□□□□ -0.66
RNF40-205ENST00000563909 MLST8Q9BVC4 326 aa10.92□□□□□ -0.66
RNF40-205ENST00000563909 SMDT1Q9H4I9 107 aa10.92□□□□□ -0.66
RNF40-205ENST00000563909 NAGKQ9UJ70 344 aa10.92□□□□□ -0.66
RNF40-205ENST00000563909 TRGV11A0A075B6L2 103 aa10.91□□□□□ -0.66
RNF40-205ENST00000563909 SNURFLB1AK76 121 aa10.91□□□□□ -0.66
RNF40-205ENST00000563909 GCSHP23434 173 aa10.91□□□□□ -0.66
RNF40-205ENST00000563909 GNG4P50150 75 aa10.91□□□□□ -0.66
RNF40-205ENST00000563909 TDRG1Q3Y452 100 aa10.91□□□□□ -0.66
RNF40-205ENST00000563909 CENPWQ5EE01 88 aa10.91□□□□□ -0.66
RNF40-205ENST00000563909 IBA57Q5T440 356 aaKnown RBP10.91□□□□□ -0.66
RNF40-205ENST00000563909 FAM162BQ5T6X4 162 aa10.91□□□□□ -0.66
RNF40-205ENST00000563909 SMIM12Q96EX1 92 aa10.91□□□□□ -0.66
RNF40-205ENST00000563909 UPK3BQ9BT76 320 aa10.91□□□□□ -0.66
RNF40-205ENST00000563909 SDF2L1Q9HCN8 221 aa10.91□□□□□ -0.66
RNF40-205ENST00000563909 TIMM8BQ9Y5J9 83 aaPredicted RBP10.91□□□□□ -0.66
RNF40-205ENST00000563909 PLAC8L1A1L4L8 177 aa10.9□□□□□ -0.66
RNF40-205ENST00000563909 RAB19A4D1S5 217 aa10.9□□□□□ -0.66
RNF40-205ENST00000563909 ESRGQ1W209 222 aa10.9□□□□□ -0.66
RNF40-205ENST00000563909 ZNF674Q2M3X9 581 aa10.9□□□□□ -0.66
RNF40-205ENST00000563909 NHLRC2Q8NBF2 726 aa10.9□□□□□ -0.66
RNF40-205ENST00000563909 PARLQ9H300 379 aa10.9□□□□□ -0.66
RNF40-205ENST00000563909 SH2D1AO60880 128 aa10.89□□□□□ -0.67
RNF40-205ENST00000563909 SRP19P09132 144 aaKnown RBP10.89□□□□□ -0.67
RNF40-205ENST00000563909 DNAH10OSP0CZ25 163 aa10.89□□□□□ -0.67
RNF40-205ENST00000563909 CRIP1P50238 77 aa10.89□□□□□ -0.67
RNF40-205ENST00000563909 CEBPGP53567 150 aa10.89□□□□□ -0.67
RNF40-205ENST00000563909 ZNF415Q09FC8 603 aa10.89□□□□□ -0.67
RNF40-205ENST00000563909 BIN3Q9NQY0 253 aa10.89□□□□□ -0.67
RNF40-205ENST00000563909 TP53TG3Q9ULZ0 132 aa10.89□□□□□ -0.67
RNF40-205ENST00000563909 C9JCJ5 164 aa10.88□□□□□ -0.67
RNF40-205ENST00000563909 TCL1AP56279 114 aa10.88□□□□□ -0.67
RNF40-205ENST00000563909 DAZ2Q13117 558 aaKnown RBP10.88□□□□□ -0.67
RNF40-205ENST00000563909 C11orf72Q8NBR9 251 aa10.88□□□□□ -0.67
RNF40-205ENST00000563909 DEFB104AQ8WTQ1 72 aa10.88□□□□□ -0.67
RNF40-205ENST00000563909 NOP10Q9NPE3 64 aaKnown RBP10.88□□□□□ -0.67
RNF40-205ENST00000563909 GSN-AS1Q9NRJ2 163 aa10.88□□□□□ -0.67
RNF40-205ENST00000563909 C11orf21Q9P2W6 132 aa10.88□□□□□ -0.67
RNF40-205ENST00000563909 MRPS16Q9Y3D3 137 aaKnown RBP10.88□□□□□ -0.67
RNF40-205ENST00000563909 A0A087WTM6 91 aa10.87□□□□□ -0.67
RNF40-205ENST00000563909 GNRH2O43555 120 aa10.87□□□□□ -0.67
RNF40-205ENST00000563909 IGLV2-8P01709 118 aa10.87□□□□□ -0.67
RNF40-205ENST00000563909 ORM1P02763 201 aa10.87□□□□□ -0.67
RNF40-205ENST00000563909 PLA2G1BP04054 148 aaKnown RBP10.87□□□□□ -0.67
RNF40-205ENST00000563909 TYMSP04818 313 aa10.87□□□□□ -0.67
RNF40-205ENST00000563909 MGST1P10620 155 aaKnown RBP10.87□□□□□ -0.67
RNF40-205ENST00000563909 TRBV20OR9-2A0A075B6H5 130 aa10.86□□□□□ -0.67
RNF40-205ENST00000563909 IGKV3D-20A0A0C4DH25 116 aa10.86□□□□□ -0.67
RNF40-205ENST00000563909 B4DEV8 164 aa10.86□□□□□ -0.67
RNF40-205ENST00000563909 OR5I1Q13606 314 aa10.86□□□□□ -0.67
RNF40-205ENST00000563909 PRR27Q6MZM9 219 aa10.86□□□□□ -0.67
RNF40-205ENST00000563909 DAZAP1Q96EP5 407 aaKnown RBP10.86□□□□□ -0.67
RNF40-205ENST00000563909 SPXQ9BT56 116 aa10.86□□□□□ -0.67
RNF40-205ENST00000563909 TRAV26-1A0A087WT03 109 aa10.85□□□□□ -0.67
RNF40-205ENST00000563909 IGHV3-16A0A0C4DH30 117 aa10.85□□□□□ -0.67
RNF40-205ENST00000563909 ZNF727A8MUV8 499 aa10.85□□□□□ -0.67
RNF40-205ENST00000563909 SRSF3P84103 164 aaKnown RBP10.85□□□□□ -0.67
RNF40-205ENST00000563909 LINC01559Q495D7 138 aa10.85□□□□□ -0.67
RNF40-205ENST00000563909 FAM74A3Q4VXF1 159 aa10.85□□□□□ -0.67
RNF40-205ENST00000563909 SMIM7Q9BQ49 75 aa10.85□□□□□ -0.67
RNF40-205ENST00000563909 TNFRSF18Q9Y5U5 241 aa10.85□□□□□ -0.67
RNF40-205ENST00000563909 LY96Q9Y6Y9 160 aa10.85□□□□□ -0.67
RNF40-205ENST00000563909 PGPEP1LA6NFU8 196 aa10.84□□□□□ -0.67
RNF40-205ENST00000563909 KRBOX1C9JBD0 128 aa10.84□□□□□ -0.67
RNF40-205ENST00000563909 C9JQL5 133 aa10.84□□□□□ -0.67
RNF40-205ENST00000563909 M0R036 132 aa10.84□□□□□ -0.67
RNF40-205ENST00000563909 OCC1Q8TAD7 63 aa10.84□□□□□ -0.67
RNF40-205ENST00000563909 TMEM70Q9BUB7 260 aa10.84□□□□□ -0.67
RNF40-205ENST00000563909 A0A0J9YY99 117 aa10.83□□□□□ -0.68
RNF40-205ENST00000563909 SPINK4O60575 86 aa10.83□□□□□ -0.68
RNF40-205ENST00000563909 S100A4P26447 101 aaKnown RBP10.83□□□□□ -0.68
RNF40-205ENST00000563909 ASIPP42127 132 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms