RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 MUC4Q99102 2169 aa5.94□□□□□ -1.46
UBR1-204ENST00000563239 TRBV20OR9-2A0A075B6H5 130 aa5.93□□□□□ -1.46
UBR1-204ENST00000563239 A0A096LPF7 62 aa5.93□□□□□ -1.46
UBR1-204ENST00000563239 RAB19A4D1S5 217 aa5.93□□□□□ -1.46
UBR1-204ENST00000563239 PGPEP1LA6NFU8 196 aa5.93□□□□□ -1.46
UBR1-204ENST00000563239 B4DEV8 164 aa5.93□□□□□ -1.46
UBR1-204ENST00000563239 M0R036 132 aa5.93□□□□□ -1.46
UBR1-204ENST00000563239 NUDT3O95989 172 aa5.93□□□□□ -1.46
UBR1-204ENST00000563239 ORM1P02763 201 aa5.93□□□□□ -1.46
UBR1-204ENST00000563239 CRYBA4P53673 196 aa5.93□□□□□ -1.46
UBR1-204ENST00000563239 BLOC1S1P78537 153 aa5.93□□□□□ -1.46
UBR1-204ENST00000563239 RNF212Q495C1 297 aa5.93□□□□□ -1.46
UBR1-204ENST00000563239 VAX2Q9UIW0 290 aa5.93□□□□□ -1.46
UBR1-204ENST00000563239 FAT2Q9NYQ8 4349 aa5.93□□□□□ -1.46
UBR1-204ENST00000563239 TRAV4A0A0B4J268 109 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 GRIFINA4D1Z8 144 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 C9JCJ5 164 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 RS1O15537 224 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 PDE6DO43924 150 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 IFNA1P01562 189 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 ZNF876PQ49A33 203 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 CENPWQ5EE01 88 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 ZNF506Q5JVG8 444 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 CFAP126Q5VTH2 177 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 SCRT2Q9NQ03 307 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 IL36BQ9NZH7 164 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 HHLA3Q9XRX5 114 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 LINC00588Q9Y4M8 146 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 UBR4Q5T4S7 5183 aa5.92□□□□□ -1.46
UBR1-204ENST00000563239 NACAE9PAV3 2078 aa5.91□□□□□ -1.46
UBR1-204ENST00000563239 TMSB15BA0A087X1C1 80 aa5.91□□□□□ -1.46
UBR1-204ENST00000563239 RBFOX3A6NFN3 312 aa5.91□□□□□ -1.46
UBR1-204ENST00000563239 H3BVH4 76 aa5.91□□□□□ -1.46
UBR1-204ENST00000563239 ARMS2P0C7Q2 107 aa5.91□□□□□ -1.46
UBR1-204ENST00000563239 TAGLN2P37802 199 aaKnown RBP5.91□□□□□ -1.46
UBR1-204ENST00000563239 ASIPP42127 132 aa5.91□□□□□ -1.46
UBR1-204ENST00000563239 RPL19P84098 196 aaKnown RBP5.91□□□□□ -1.46
UBR1-204ENST00000563239 ESRGQ1W209 222 aa5.91□□□□□ -1.46
UBR1-204ENST00000563239 OR4C5Q8NGB2 326 aa5.91□□□□□ -1.46
UBR1-204ENST00000563239 MED9Q9NWA0 146 aa5.91□□□□□ -1.46
UBR1-204ENST00000563239 PRO0255Q9UI72 69 aa5.91□□□□□ -1.46
UBR1-204ENST00000563239 TRGV4A0A0C4DH28 118 aa5.9□□□□□ -1.46
UBR1-204ENST00000563239 C19orf71A6NCJ1 209 aa5.9□□□□□ -1.46
UBR1-204ENST00000563239 PAX4O43316 350 aa5.9□□□□□ -1.46
UBR1-204ENST00000563239 GATA1P15976 413 aaPredicted RBP5.9□□□□□ -1.46
UBR1-204ENST00000563239 S100A4P26447 101 aaKnown RBP5.9□□□□□ -1.46
UBR1-204ENST00000563239 SLAQ13239 276 aa5.9□□□□□ -1.46
UBR1-204ENST00000563239 PIK3CD-AS1Q5SR53 167 aa5.9□□□□□ -1.46
UBR1-204ENST00000563239 PRR27Q6MZM9 219 aa5.9□□□□□ -1.46
UBR1-204ENST00000563239 UFSP1Q6NVU6 142 aa5.9□□□□□ -1.46
UBR1-204ENST00000563239 TEX261Q6UWH6 196 aa5.9□□□□□ -1.46
UBR1-204ENST00000563239 Q6ZSN1 163 aa5.9□□□□□ -1.46
UBR1-204ENST00000563239 UBE2DNLQ8IWF7 75 aa5.9□□□□□ -1.46
UBR1-204ENST00000563239 ZNRF2Q8NHG8 242 aa5.9□□□□□ -1.46
UBR1-204ENST00000563239 PCNPQ8WW12 178 aaKnown RBP5.9□□□□□ -1.46
UBR1-204ENST00000563239 JPT2Q9H910 190 aa5.9□□□□□ -1.46
UBR1-204ENST00000563239 LOC100131303A0A0U1RQF7 123 aa5.89□□□□□ -1.47
UBR1-204ENST00000563239 TMEM238LA0A1B0GVL6 79 aa5.89□□□□□ -1.47
UBR1-204ENST00000563239 CXCL1P09341 107 aa5.89□□□□□ -1.47
UBR1-204ENST00000563239 GNG4P50150 75 aa5.89□□□□□ -1.47
UBR1-204ENST00000563239 FAM3BP58499 235 aaPredicted RBP5.89□□□□□ -1.47
UBR1-204ENST00000563239 Q6ZR54 194 aa5.89□□□□□ -1.47
UBR1-204ENST00000563239 SMIM12Q96EX1 92 aa5.89□□□□□ -1.47
UBR1-204ENST00000563239 FAM210AQ96ND0 272 aa5.89□□□□□ -1.47
UBR1-204ENST00000563239 SSBP4Q9BWG4 385 aaPredicted RBP5.89□□□□□ -1.47
UBR1-204ENST00000563239 SAMD10Q9BYL1 202 aa5.89□□□□□ -1.47
UBR1-204ENST00000563239 PARLQ9H300 379 aa5.89□□□□□ -1.47
UBR1-204ENST00000563239 HECTD4Q9Y4D8 3996 aa5.89□□□□□ -1.47
UBR1-204ENST00000563239 IGLV2-18A0A075B6J9 118 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 IGHV3-73A0A0B4J1V6 119 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 TMEM250H0YL14 139 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 K7EN84 100 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 K7EQD1 137 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 M0R2N4 97 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 SNAI2O43623 268 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 NDUFS6O75380 124 aaKnown RBP5.88□□□□□ -1.47
UBR1-204ENST00000563239 NXPH4O95158 308 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 GHRHP01286 108 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 MED14OSP0DP75 135 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 MGST1P10620 155 aaKnown RBP5.88□□□□□ -1.47
UBR1-204ENST00000563239 GYPEP15421 78 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 CCL18P55774 89 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 TOR2AQ5JU69 321 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 SLC25A29Q8N8R3 303 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 OCC1Q8TAD7 63 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 Q9UF83 564 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 MRPS16Q9Y3D3 137 aaKnown RBP5.88□□□□□ -1.47
UBR1-204ENST00000563239 ICOSQ9Y6W8 199 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 PKD1P98161 4303 aa5.88□□□□□ -1.47
UBR1-204ENST00000563239 TRBV6-4A0A1B0GX49 114 aa5.87□□□□□ -1.47
UBR1-204ENST00000563239 A8MWV9 139 aa5.87□□□□□ -1.47
UBR1-204ENST00000563239 C9JQL5 133 aa5.87□□□□□ -1.47
UBR1-204ENST00000563239 CIDEAO60543 219 aa5.87□□□□□ -1.47
UBR1-204ENST00000563239 CRYGDP07320 174 aa5.87□□□□□ -1.47
UBR1-204ENST00000563239 SRP19P09132 144 aaKnown RBP5.87□□□□□ -1.47
UBR1-204ENST00000563239 GZMBP10144 247 aa5.87□□□□□ -1.47
UBR1-204ENST00000563239 MRPL23Q16540 153 aaKnown RBP5.87□□□□□ -1.47
UBR1-204ENST00000563239 LYPD5Q6UWN5 251 aa5.87□□□□□ -1.47
UBR1-204ENST00000563239 ZFP2Q6ZN57 461 aa5.87□□□□□ -1.47
UBR1-204ENST00000563239 OR10AG1Q8NH19 301 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms