RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 KLLNB2CW77 178 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 B5MCH6 92 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 CCL24O00175 119 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 SPRY2O43597 315 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 HLA-DQA1P01909 254 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 ARMS2P0C7Q2 107 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 ID1P41134 155 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 RPS20P60866 119 aaKnown RBP4.85□□□□□ -1.63
CAPN3-210ENST00000561817 HBBP68871 147 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 Q0VG73 95 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 Q6AWC8 147 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 AMTNQ6UX39 209 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 OR10J6PQ8NGY7 276 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 ODF3Q96PU9 254 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 TMSB15BA0A087X1C1 80 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 A0A1B0GUT8 65 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 F2Z2F3 143 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 NUPR1O60356 82 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 APCSP02743 223 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 ZNF688P0C7X2 276 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 ESDP10768 282 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 RAB4AP20338 218 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 KIAA1644Q3SXP7 199 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 PSMG4Q5JS54 123 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 LYZL1Q6UWQ5 148 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 ZNF493Q6ZR52 646 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 TMEM61Q8N0U2 210 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 TMEM256Q8N2U0 113 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 C3orf56Q8N813 242 aa4.84□□□□□ -1.63
CAPN3-210ENST00000561817 ZNF256Q9Y2P7 627 aaPredicted RBP4.84□□□□□ -1.63
CAPN3-210ENST00000561817 AGRNO00468 2067 aa4.84□□□□□ -1.64
CAPN3-210ENST00000561817 IGHV4-4A0A075B6R2 117 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 GRIFINA4D1Z8 144 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 M0QZ24 198 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 SNAI2O43623 268 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 ZNF324O75467 553 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-210ENST00000561817 TFPI2P48307 235 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 HERV-K104P63124 156 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 RIGQ13278 110 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 CD300EQ496F6 205 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-210ENST00000561817 LINC01620Q4KN68 170 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 C5orf47Q569G3 176 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 PRR31Q5SQ13 230 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 DNLZQ5SXM8 178 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 FOXI2Q6ZQN5 318 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 LINC00518Q8N0U6 118 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 FER1L6-AS1Q8NA97 138 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 HIST1H2BLQ99880 126 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 WNK1Q9H4A3 2382 aa4.83□□□□□ -1.64
CAPN3-210ENST00000561817 CMYA5Q8N3K9 4069 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 LOC102724200A0A096LPH7 203 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-210ENST00000561817 TRAV21A0A0B4J279 112 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 RBMY1BA6NDE4 496 aaKnown RBP4.82□□□□□ -1.64
CAPN3-210ENST00000561817 RBMY1EA6NEQ0 496 aaKnown RBP4.82□□□□□ -1.64
CAPN3-210ENST00000561817 VCYO14598 125 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 AMBPP02760 352 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 ORM1P02763 201 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 OR5AL1P0C617 328 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 RBMY1DP0C7P1 496 aaKnown RBP4.82□□□□□ -1.64
CAPN3-210ENST00000561817 RAB4BP61018 213 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 SNRPD3P62318 126 aaKnown RBP4.82□□□□□ -1.64
CAPN3-210ENST00000561817 OR10J3Q5JRS4 329 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 NDUFA11Q86Y39 141 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 C18orf32Q8TCD1 76 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 URB1-AS1Q96HZ7 61 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 MAP6D1Q9H9H5 199 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 SCRT2Q9NQ03 307 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 U3KQK5 164 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 TENM1Q9UKZ4 2725 aa4.82□□□□□ -1.64
CAPN3-210ENST00000561817 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 MUC21A0A0G2JKD1 596 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 MUC21A0A140T8X8 626 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 KNCNA6PVL3 124 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 H3BMM0 161 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 CRXO43186 299 aaPredicted RBP4.81□□□□□ -1.64
CAPN3-210ENST00000561817 SERF1AO75920 110 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 DUSP14O95147 198 aaKnown RBP4.81□□□□□ -1.64
CAPN3-210ENST00000561817 S100A8P05109 93 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 HLA-DRB4P13762 266 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 SRIP30626 198 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 RNASE4P34096 147 aaKnown RBP4.81□□□□□ -1.64
CAPN3-210ENST00000561817 LEPP41159 167 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 DEFB131AP59861 70 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 PAFAH1B2P68402 229 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 RNF151Q2KHN1 245 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 ODF3L2Q3SX64 289 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 TDRG1Q3Y452 100 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 ANXA2RQ3ZCQ2 193 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 GAGE13Q4V321 117 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 PDZD11Q5EBL8 140 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 MUC21Q5SSG8 566 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 FAM104BQ5XKR9 115 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 RNF185Q96GF1 192 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 RCHY1Q96PM5 261 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 MSRB1Q9NZV6 116 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 HLA-DRB4X5D2U9 266 aa4.81□□□□□ -1.64
CAPN3-210ENST00000561817 VWFP04275 2813 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 MUC4Q99102 2169 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 C7orf71A4D174 169 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 NXPH4O95158 308 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms