RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 HOXA3O43365 443 aaPredicted RBP7.78□□□□□ -1.16
TUBGCP4-202ENST00000561691 IGKV2D-40P01614 121 aaPredicted RBP7.78□□□□□ -1.16
TUBGCP4-202ENST00000561691 SPINK8P0C7L1 97 aa7.78□□□□□ -1.16
TUBGCP4-202ENST00000561691 HERV-K104P63124 156 aa7.78□□□□□ -1.16
TUBGCP4-202ENST00000561691 GAGE5Q13069 117 aa7.78□□□□□ -1.16
TUBGCP4-202ENST00000561691 GAGE6Q13070 117 aa7.78□□□□□ -1.16
TUBGCP4-202ENST00000561691 OXLD1Q5BKU9 147 aa7.78□□□□□ -1.16
TUBGCP4-202ENST00000561691 ZNF575Q86XF7 245 aa7.78□□□□□ -1.16
TUBGCP4-202ENST00000561691 C20orf78Q9BR46 151 aa7.78□□□□□ -1.16
TUBGCP4-202ENST00000561691 RPP21Q9H633 154 aaKnown RBP7.78□□□□□ -1.16
TUBGCP4-202ENST00000561691 A0A096LNJ9 63 aa7.77□□□□□ -1.17
TUBGCP4-202ENST00000561691 TMEM89A2RUT3 159 aa7.77□□□□□ -1.17
TUBGCP4-202ENST00000561691 K7ERJ3 54 aa7.77□□□□□ -1.17
TUBGCP4-202ENST00000561691 PCP2Q8IVA1 136 aa7.77□□□□□ -1.17
TUBGCP4-202ENST00000561691 Q8N2B8 174 aa7.77□□□□□ -1.17
TUBGCP4-202ENST00000561691 METTL26Q96S19 204 aa7.77□□□□□ -1.17
TUBGCP4-202ENST00000561691 AP5S1Q9NUS5 200 aa7.77□□□□□ -1.17
TUBGCP4-202ENST00000561691 IGLL5B9A064 214 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 MT-ATP8P03928 68 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 CSN1S1P47710 185 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 ATP6V0E2Q8NHE4 81 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 C8orf49Q96NF6 230 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 TM2D2Q9BX73 214 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 GFRA4Q9GZZ7 299 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 AAMDCQ9H7C9 122 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 SOCS3O14543 225 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 CT45A10P0DMU9 189 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 EDN2P20800 178 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 GCSHP23434 173 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 TM4SF20Q53R12 229 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 RBPMS2Q6ZRY4 209 aaKnown RBP7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 Q6ZUT4 128 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 IL17RELQ6ZVW7 336 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 RNF182Q8N6D2 247 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 RNF152Q8N8N0 203 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 PGLYRP4Q96LB8 373 aa7.76□□□□□ -1.17
TUBGCP4-202ENST00000561691 H3BMG7 143 aa7.75□□□□□ -1.17
TUBGCP4-202ENST00000561691 GAGE13Q4V321 117 aa7.75□□□□□ -1.17
TUBGCP4-202ENST00000561691 GATD1Q8NB37 220 aa7.75□□□□□ -1.17
TUBGCP4-202ENST00000561691 FOXC2Q99958 501 aa7.75□□□□□ -1.17
TUBGCP4-202ENST00000561691 SONP18583 2426 aaKnown RBP7.75□□□□□ -1.17
TUBGCP4-202ENST00000561691 CSN3P07498 182 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 ZNF80P51504 273 aaPredicted RBP7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 XGP55808 180 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 FOXI1Q12951 378 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 FHL3Q13643 280 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 SYT8Q8NBV8 401 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 Q8TAT8 98 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 C20orf173Q96LM9 149 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 PRR25Q96S07 402 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 C1QTNF4Q9BXJ3 329 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 TNFRSF18Q9Y5U5 241 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 HECTD1Q9ULT8 2610 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 CUBNO60494 3623 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 ACANP16112 2415 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 P01737 135 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 CACNG7P62955 275 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 OR8A1Q8NGG7 326 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 MRPL53Q96EL3 112 aaKnown RBP7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 SLC50A1Q9BRV3 221 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 ANAPC13Q9BS18 74 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 CHAC1Q9BUX1 264 aa7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 TIMM8BQ9Y5J9 83 aaPredicted RBP7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 FASNP49327 2511 aaKnown RBP7.74□□□□□ -1.17
TUBGCP4-202ENST00000561691 NMUP48645 174 aa7.73□□□□□ -1.17
TUBGCP4-202ENST00000561691 ERCC8Q13216 396 aa7.73□□□□□ -1.17
TUBGCP4-202ENST00000561691 DUX5Q96PT3 197 aa7.73□□□□□ -1.17
TUBGCP4-202ENST00000561691 NHP2Q9NX24 153 aaKnown RBP7.73□□□□□ -1.17
TUBGCP4-202ENST00000561691 MYO9AB2RTY4 2548 aa7.73□□□□□ -1.17
TUBGCP4-202ENST00000561691 IGHV7-4-1A0A0J9YVY3 117 aa7.72□□□□□ -1.17
TUBGCP4-202ENST00000561691 RBAKDNA6NC62 111 aa7.72□□□□□ -1.17
TUBGCP4-202ENST00000561691 B5MCH6 92 aa7.72□□□□□ -1.17
TUBGCP4-202ENST00000561691 K7EMT4 169 aa7.72□□□□□ -1.17
TUBGCP4-202ENST00000561691 APOMO95445 188 aa7.72□□□□□ -1.17
TUBGCP4-202ENST00000561691 TCTAP57738 103 aa7.72□□□□□ -1.17
TUBGCP4-202ENST00000561691 PSMG4Q5JS54 123 aa7.72□□□□□ -1.17
TUBGCP4-202ENST00000561691 CEND1Q8N111 149 aa7.72□□□□□ -1.17
TUBGCP4-202ENST00000561691 AGPAT4-IT1Q9H0P7 198 aa7.72□□□□□ -1.17
TUBGCP4-202ENST00000561691 SH2D1AO60880 128 aa7.72□□□□□ -1.17
TUBGCP4-202ENST00000561691 ELANEP08246 267 aa7.72□□□□□ -1.17
TUBGCP4-202ENST00000561691 RPL32P62910 135 aaKnown RBP7.72□□□□□ -1.17
TUBGCP4-202ENST00000561691 TMEM86BQ8N661 226 aa7.72□□□□□ -1.17
TUBGCP4-202ENST00000561691 ESM1Q9NQ30 184 aa7.72□□□□□ -1.17
TUBGCP4-202ENST00000561691 A0A1B0GWB2 263 aa7.71□□□□□ -1.18
TUBGCP4-202ENST00000561691 NHLRC4P0CG21 123 aaPredicted RBP7.71□□□□□ -1.18
TUBGCP4-202ENST00000561691 FAM106AQ4KMX7 169 aa7.71□□□□□ -1.18
TUBGCP4-202ENST00000561691 RAX2Q96IS3 184 aa7.71□□□□□ -1.18
TUBGCP4-202ENST00000561691 UFC1Q9Y3C8 167 aa7.71□□□□□ -1.18
TUBGCP4-202ENST00000561691 TMEM213A2RRL7 107 aa7.7□□□□□ -1.18
TUBGCP4-202ENST00000561691 LGALS1P09382 135 aaKnown RBP7.7□□□□□ -1.18
TUBGCP4-202ENST00000561691 HLA-DRB4P13762 266 aa7.7□□□□□ -1.18
TUBGCP4-202ENST00000561691 RRN3P1Q2M238 152 aa7.7□□□□□ -1.18
TUBGCP4-202ENST00000561691 Q6AWC8 147 aa7.7□□□□□ -1.18
TUBGCP4-202ENST00000561691 AMTNQ6UX39 209 aa7.7□□□□□ -1.18
TUBGCP4-202ENST00000561691 C9orf47Q6ZRZ4 202 aa7.7□□□□□ -1.18
TUBGCP4-202ENST00000561691 C18orf65Q6ZTR6 163 aa7.7□□□□□ -1.18
TUBGCP4-202ENST00000561691 PRSS3P2Q8NHM4 247 aa7.7□□□□□ -1.18
TUBGCP4-202ENST00000561691 DAZAP1Q96EP5 407 aaKnown RBP7.7□□□□□ -1.18
TUBGCP4-202ENST00000561691 RHPN1-AS1Q9BWJ2 59 aa7.7□□□□□ -1.18
TUBGCP4-202ENST00000561691 DAZ1Q9NQZ3 744 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms